##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546921_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 904172 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.725766778887202 31.0 31.0 34.0 30.0 34.0 2 32.08819671478435 33.0 31.0 34.0 30.0 34.0 3 32.06477528611813 33.0 31.0 34.0 30.0 34.0 4 35.853793304813685 37.0 35.0 37.0 35.0 37.0 5 35.85960967603509 37.0 35.0 37.0 35.0 37.0 6 35.91094725339869 37.0 35.0 37.0 35.0 37.0 7 36.10403440938229 37.0 35.0 37.0 35.0 37.0 8 13.241876545613003 0.0 0.0 35.0 0.0 37.0 9 24.93354251182297 18.0 17.0 39.0 17.0 39.0 10 32.747576788487144 32.0 32.0 38.0 27.0 39.0 11 35.6108450604531 37.0 35.0 37.0 32.0 39.0 12 36.660122189141006 38.0 35.0 39.0 33.0 39.0 13 36.886225187243134 39.0 35.0 39.0 33.0 39.0 14 37.998422866445765 40.0 37.0 41.0 33.0 41.0 15 38.29102538012679 40.0 37.0 41.0 33.0 41.0 16 38.38809761859469 40.0 37.0 41.0 34.0 41.0 17 38.35929225855258 40.0 37.0 41.0 34.0 41.0 18 38.2809620293484 40.0 37.0 41.0 34.0 41.0 19 38.2232351809169 40.0 37.0 41.0 34.0 41.0 20 38.149457182925374 40.0 36.0 41.0 34.0 41.0 21 38.10047645801905 40.0 36.0 41.0 33.0 41.0 22 38.07039921607836 40.0 36.0 41.0 33.0 41.0 23 37.921270510478095 40.0 36.0 41.0 33.0 41.0 24 37.73753555739395 40.0 35.0 41.0 33.0 41.0 25 37.62705547174652 40.0 35.0 41.0 33.0 41.0 26 37.56082692231124 40.0 35.0 41.0 33.0 41.0 27 37.52611781829121 40.0 35.0 41.0 33.0 41.0 28 37.43625770318037 39.0 35.0 41.0 33.0 41.0 29 37.382346500444605 39.0 35.0 41.0 33.0 41.0 30 37.23888928212774 39.0 35.0 41.0 33.0 41.0 31 37.08001574921586 39.0 35.0 41.0 32.0 41.0 32 36.84925655738068 39.0 35.0 41.0 31.0 41.0 33 36.5863298133541 39.0 35.0 41.0 31.0 41.0 34 36.28210782904138 39.0 35.0 41.0 30.0 41.0 35 36.05297664603637 39.0 35.0 41.0 29.0 41.0 36 35.90802081904771 39.0 35.0 41.0 27.0 41.0 37 35.86144007998478 39.0 35.0 41.0 27.0 41.0 38 35.75737027910619 39.0 35.0 41.0 27.0 41.0 39 35.65940772330928 39.0 35.0 41.0 26.0 41.0 40 35.54300509195153 39.0 35.0 41.0 26.0 41.0 41 35.44052016651699 39.0 35.0 41.0 25.0 41.0 42 35.386757165672016 39.0 35.0 40.0 25.0 41.0 43 35.277313387275875 38.0 35.0 40.0 24.0 41.0 44 35.04375716124808 38.0 34.0 40.0 23.0 41.0 45 34.98854974496003 38.0 34.0 40.0 23.0 41.0 46 34.98014758253961 38.0 34.0 40.0 23.0 41.0 47 34.9314101741704 38.0 34.0 40.0 23.0 41.0 48 34.85414390182399 38.0 34.0 40.0 23.0 41.0 49 34.74847263573745 38.0 34.0 40.0 24.0 41.0 50 34.64172303499777 37.0 34.0 40.0 24.0 41.0 51 34.29751640174657 37.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 3.0 13 4.0 14 5.0 15 16.0 16 72.0 17 135.0 18 314.0 19 590.0 20 1184.0 21 1858.0 22 3122.0 23 5044.0 24 7901.0 25 12193.0 26 15743.0 27 16947.0 28 16716.0 29 17131.0 30 19613.0 31 23815.0 32 30332.0 33 42291.0 34 64388.0 35 94206.0 36 96936.0 37 158618.0 38 194848.0 39 80127.0 40 17.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.42881664108157 22.8741876545613 25.681949894489104 18.01504580986803 2 36.27263396787337 23.115402821587043 28.274266400640585 12.337696809899 3 29.289891746260665 23.417225926040622 34.60790646027526 12.684975867423454 4 25.738355091730337 25.692456744955606 34.11408448834956 14.455103674964498 5 22.411222643479338 30.04074446012484 33.09536238680251 14.452670509593307 6 21.427339046110696 38.43317421906451 30.34710210004291 9.792384634781879 7 82.66989024212208 3.9106497436328485 11.456448551824211 1.9630114624208668 8 31.228460956543667 63.6261684723703 4.1653579186261025 0.9800126524599303 9 79.44008440871869 4.724432961870087 12.47306928327796 3.3624133461332577 10 46.53096977123822 23.46588923346443 18.23038094521839 11.772760050078968 11 38.315497493839665 21.62232407108382 25.09566763845817 14.966510796618342 12 35.41472197767682 19.471074087673585 29.182611273076365 15.93159266157324 13 26.221117221059707 25.449361404688485 30.139177059232093 18.190344315019708 14 19.089067124396685 27.53856567113337 34.03146746415505 19.340899740314896 15 18.925049658693258 22.01948301871768 41.09903867848153 17.956428644107536 16 24.83067380985034 19.44021712682985 37.57128068553328 18.15782837778653 17 24.203580734638987 20.554938662112963 30.81095189853258 24.430528704715474 18 25.758926398959492 22.29078095760541 33.0614086700318 18.88888397340329 19 27.584353419482134 24.731245824909422 28.791424640444518 18.89297611516393 20 28.01557668231266 25.363868821418933 28.32757484195485 18.29297965431356 21 26.12091504713705 25.228164552762085 30.98027808868224 17.670642311418625 22 24.322916436253276 21.7398901978827 32.417283437222125 21.519909928641894 23 22.877505607340197 24.163544104440305 31.93430011104082 21.02465017717868 24 24.128926797113824 22.969965891445433 34.452405073371 18.448702238069746 25 24.095857867750826 22.64447472383573 31.907756488809653 21.351910919603792 26 20.355419101675345 26.15940329937224 30.318899501422298 23.166278097530117 27 19.444862260720306 24.922470503399797 34.28020332414629 21.352463911733608 28 18.88822038284751 24.51922864233796 35.21918396057387 21.373367014240653 29 20.808762049698508 25.772972399056815 33.435452546639354 19.98281300460532 30 23.68631189640909 24.137664072764917 33.13141747366652 19.04460655715948 31 28.198285282003866 22.714041133766585 29.87141826997518 19.21625531425437 32 28.983091712638746 23.540432572563628 28.906668200298174 18.569807514499452 33 27.83076671252815 23.97917652835965 28.323482700194212 19.866574058917994 34 22.41055905292356 25.28169419092827 31.301787712957267 21.0059590431909 35 21.887317899691652 26.89366624934194 31.003835553412408 20.215180297554006 36 26.254739142552523 27.50947828510505 27.4567228359206 18.779059736421832 37 23.521077848020067 29.3345735103498 27.0726145025504 20.071734139079734 38 23.84236627544317 29.662608441756653 25.744769800436202 20.750255482363976 39 23.11319085306778 27.444778205916577 26.63044199554952 22.811588945466127 40 25.115575355131547 24.26595824688223 27.244373858071253 23.374092539914972 41 21.151064178054618 24.23001375844419 28.743646120428412 25.87527594307278 42 22.01716045177245 25.541932287219687 27.327433275969614 25.113473985038244 43 21.569568621899375 24.503081272147334 27.878987626248104 26.04836247970519 44 21.056613122282045 26.05533018054087 29.252730675137034 23.635326022040054 45 21.836995615878394 28.337528700291536 26.65742801148454 23.168047672345526 46 23.50570466681118 27.175581637122143 27.809089421039364 21.509624275027317 47 21.703724512592736 26.274204465522043 29.424158235379995 22.597912786505223 48 21.56072074782232 25.359113089102514 31.119410908543948 21.960755254531218 49 23.559676698681226 23.704118242989168 30.970324230345554 21.765880827984056 50 20.860743309901213 26.084970558699013 30.36369186393739 22.690594267462387 51 20.147162265586633 27.52684223798127 29.849740978486395 22.4762545179457 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 608.0 1 1427.5 2 2247.0 3 13817.5 4 25388.0 5 16677.0 6 7966.0 7 7652.0 8 7338.0 9 7251.0 10 7164.0 11 6959.5 12 6755.0 13 6402.5 14 6050.0 15 5726.5 16 5403.0 17 4991.0 18 4579.0 19 4490.0 20 4401.0 21 4443.0 22 4485.0 23 4831.5 24 5178.0 25 5790.0 26 7191.0 27 7980.0 28 9590.5 29 11201.0 30 12767.0 31 14333.0 32 15973.5 33 17614.0 34 18993.0 35 20372.0 36 23233.0 37 26094.0 38 31635.5 39 37177.0 40 42592.5 41 48008.0 42 50948.0 43 53888.0 44 55067.5 45 56247.0 46 56839.5 47 57432.0 48 57443.0 49 57454.0 50 57025.0 51 56596.0 52 55244.0 53 53892.0 54 53789.0 55 53686.0 56 53408.0 57 53130.0 58 50770.5 59 48411.0 60 44869.5 61 41328.0 62 36606.5 63 31885.0 64 27197.0 65 22509.0 66 18691.5 67 14874.0 68 12619.0 69 10364.0 70 8591.0 71 6818.0 72 5526.0 73 4234.0 74 3348.0 75 1871.5 76 1281.0 77 911.5 78 542.0 79 377.5 80 213.0 81 145.5 82 78.0 83 58.0 84 38.0 85 35.0 86 32.0 87 23.5 88 15.0 89 11.0 90 7.0 91 7.0 92 7.0 93 5.5 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 904172.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.7848859117952 #Duplication Level Percentage of deduplicated Percentage of total 1 67.74467294778199 22.88746046672693 2 7.821302070782686 5.284835962861612 3 4.613421956538779 4.675918033939008 4 3.41817693431987 4.619308710093066 5 2.658679788217454 4.491159666046125 6 2.182889974693429 4.42492132518114 7 1.784275777933802 4.2197087514871185 8 1.4349956431690505 3.8784931270711627 9 1.2131682206276346 3.68880749331482 >10 7.06095415186318 37.76750702044726 >50 0.04738841220677995 1.065783498856539 >100 0.019415953935373476 1.3292757572722766 >500 0.0 0.0 >1k 0.0 0.0 >5k 6.581679299609191E-4 1.6668201867029238 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9649 1.067164212118933 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5343 0.5909273899213866 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0050875275943072775 0.0 2 0.0 0.0 0.0 0.013493007967510606 0.0 3 0.0 0.0 0.0 0.02300447260034595 0.0 4 0.0 0.0 0.0 0.03649748056785656 0.0 5 0.0 0.0 0.0 0.06989820520874347 0.0 6 0.0 0.0 0.0 0.12740938670960836 0.0 7 0.0 0.0 0.0 0.17441371774396908 0.0 8 0.0 0.0 0.0 0.2498418442508726 0.0 9 0.0 0.0 0.0 0.4036842547656862 0.0 10 0.0 0.0 0.0 0.6166968231708126 0.0 11 0.0 0.0 0.0 0.8074791079573356 0.0 12 0.0 0.0 0.0 0.9436257703180368 0.0 13 0.0 0.0 0.0 1.008878841636326 0.0 14 0.0 0.0 0.0 1.0536712041514225 0.0 15 0.0 0.0 0.0 1.090721676849095 0.0 16 0.0 0.0 0.0 1.1440301181633583 0.0 17 0.0 0.0 0.0 1.1991081342930328 0.0 18 0.0 0.0 0.0 1.2799555836721332 0.0 19 0.0 0.0 0.0 1.3279553005401628 0.0 20 0.0 0.0 0.0 1.3863512694487332 0.0 21 0.0 0.0 0.0 1.4561388762315135 0.0 22 0.0 0.0 0.0 1.5280278531075946 0.0 23 0.0 0.0 0.0 1.6086541056347685 0.0 24 0.0 0.0 0.0 1.6764509407502113 0.0 25 0.0 0.0 0.0 1.7325243427135546 0.0 26 0.0 0.0 0.0 1.7936852722712051 0.0 27 0.0 0.0 0.0 1.8722101547050782 0.0 28 0.0 0.0 0.0 1.940117588246484 0.0 29 0.0 0.0 0.0 2.0273797463314502 0.0 30 0.0 0.0 0.0 2.134881416367682 0.0 31 0.0 0.0 0.0 2.2156182673208193 0.0 32 0.0 0.0 0.0 2.294253748180656 0.0 33 0.0 0.0 0.0 2.37764496135691 0.0 34 0.0 0.0 0.0 2.479284914817092 0.0 35 0.0 0.0 0.0 2.593754285689006 0.0 36 0.0 0.0 0.0 2.695173042297262 0.0 37 0.0 0.0 0.0 2.8088682241874334 0.0 38 0.0 0.0 0.0 2.995779564065244 0.0 39 0.0 0.0 0.0 3.310763881208443 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATGCG 30 2.1649867E-6 45.000004 1 CGCATCG 40 6.8121153E-9 45.0 21 TTGTACG 70 0.0 45.0 1 CGTTTTT 7115 0.0 43.41883 1 TGTACGA 115 0.0 43.043476 2 CGGTCTA 175 0.0 42.42857 31 TAGAGTA 245 0.0 42.2449 5 GTTTTTA 4960 0.0 42.00605 2 ATTACGA 45 1.927583E-8 40.000004 2 GCGTAAG 85 0.0 39.705883 1 CGCATGA 40 3.457135E-7 39.375 2 CGAGGTA 40 3.457135E-7 39.375 6 TATTTTT 5560 0.0 39.294064 7 TATGCGA 75 0.0 39.0 2 TTATTTT 5600 0.0 38.933037 6 CACGACG 185 0.0 38.91892 26 AGGGGAA 4800 0.0 38.671875 8 CTATGCG 35 6.2468116E-6 38.571426 1 CGTACGA 35 6.2468116E-6 38.571426 2 GCCCGAA 100 0.0 38.25 25 >>END_MODULE