##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546918_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 862309 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.729406743986203 31.0 31.0 34.0 30.0 34.0 2 32.06871782620847 33.0 31.0 34.0 30.0 34.0 3 32.09831162611083 33.0 31.0 34.0 30.0 34.0 4 35.82858464889036 37.0 35.0 37.0 35.0 37.0 5 35.79904303445748 37.0 35.0 37.0 35.0 37.0 6 35.84431798809939 37.0 35.0 37.0 35.0 37.0 7 36.07338088782559 37.0 35.0 37.0 35.0 37.0 8 13.201684083083906 0.0 0.0 35.0 0.0 37.0 9 24.94116030332514 18.0 17.0 39.0 17.0 39.0 10 32.76558171142827 32.0 32.0 38.0 27.0 39.0 11 35.64602132182315 37.0 35.0 37.0 32.0 39.0 12 36.394581292784835 37.0 35.0 39.0 33.0 39.0 13 36.28534898742794 38.0 35.0 39.0 32.0 39.0 14 37.39401884939158 39.0 35.0 41.0 33.0 41.0 15 37.86441867126517 40.0 36.0 41.0 33.0 41.0 16 38.074748147125916 40.0 36.0 41.0 34.0 41.0 17 38.0679373635205 40.0 36.0 41.0 34.0 41.0 18 38.02684652485362 40.0 36.0 41.0 33.0 41.0 19 37.99200286672179 40.0 36.0 41.0 34.0 41.0 20 37.94217734014141 40.0 36.0 41.0 34.0 41.0 21 37.8145827075909 40.0 35.0 41.0 33.0 41.0 22 37.76095344012413 40.0 35.0 41.0 33.0 41.0 23 37.70150607264913 40.0 35.0 41.0 33.0 41.0 24 37.6360051907147 40.0 35.0 41.0 33.0 41.0 25 37.52575584854153 39.0 35.0 41.0 33.0 41.0 26 37.42765644333991 39.0 35.0 41.0 33.0 41.0 27 37.32027614231094 39.0 35.0 41.0 33.0 41.0 28 37.332707880817665 39.0 35.0 41.0 33.0 41.0 29 37.397553545190874 39.0 35.0 41.0 33.0 41.0 30 37.339195114512314 39.0 35.0 41.0 33.0 41.0 31 37.22301054494387 39.0 35.0 41.0 33.0 41.0 32 37.02610549118703 39.0 35.0 41.0 32.0 41.0 33 36.909254107286365 39.0 35.0 41.0 32.0 41.0 34 36.8119873502422 39.0 35.0 41.0 32.0 41.0 35 36.71766617303078 39.0 35.0 41.0 31.0 41.0 36 36.60127750029282 39.0 35.0 41.0 31.0 41.0 37 36.47124522647914 39.0 35.0 41.0 31.0 41.0 38 36.41818420079113 39.0 35.0 41.0 31.0 41.0 39 36.383210658824154 39.0 35.0 41.0 30.0 41.0 40 36.21059620159363 39.0 35.0 41.0 30.0 41.0 41 36.20718211221268 39.0 35.0 41.0 30.0 41.0 42 36.17246022017629 39.0 35.0 41.0 30.0 41.0 43 36.06893120679478 38.0 35.0 41.0 30.0 41.0 44 35.87931008489996 38.0 35.0 40.0 30.0 41.0 45 35.76237404457103 38.0 35.0 40.0 29.0 41.0 46 35.77371916563552 38.0 35.0 40.0 29.0 41.0 47 35.740188261980336 38.0 35.0 40.0 29.0 41.0 48 35.72148730907366 38.0 35.0 40.0 29.0 41.0 49 35.67617872479587 38.0 35.0 40.0 29.0 41.0 50 35.519101621344554 38.0 35.0 40.0 29.0 41.0 51 35.058875646664944 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 0.0 10 0.0 11 0.0 12 1.0 13 3.0 14 9.0 15 8.0 16 40.0 17 101.0 18 242.0 19 460.0 20 933.0 21 1636.0 22 2671.0 23 3817.0 24 5587.0 25 8014.0 26 9992.0 27 11406.0 28 12085.0 29 14041.0 30 17398.0 31 22594.0 32 30015.0 33 42830.0 34 69528.0 35 115534.0 36 84080.0 37 144324.0 38 203906.0 39 61043.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.11863844631101 25.239444329120996 27.109771555208166 14.532145669359823 2 29.056869405282793 26.958897564562122 30.160186197755095 13.824046832399986 3 28.910170252194977 25.14029193711303 32.0839745381296 13.865563272562387 4 26.352154506099325 27.853472479122914 30.815519726687302 14.978853288090463 5 22.409020432350815 31.866767017391677 30.54902592922027 15.175186621037238 6 20.605374639485383 41.30421925319114 27.50788870346941 10.582517403854071 7 86.22871847562764 4.899635745423044 7.029730641800097 1.8419151371492124 8 32.74255516294043 63.88545173481896 2.2312187394541865 1.1407743627864257 9 85.56735462577801 3.952875361384376 7.2555197730743854 3.2242502397632404 10 60.65006859490044 17.685191735213245 11.575896807292978 10.088842862593339 11 55.329701997775736 17.815191538068138 16.074748147125913 10.780358317030206 12 49.36374315935471 19.78501905929313 18.85437818693763 11.99685959441453 13 21.21861188970543 46.122561633938645 20.144171057010883 12.514655419345038 14 12.248741460427759 49.62374276506449 25.280612866153547 12.846902908354199 15 10.252357333624024 22.83404208932065 53.43815268076757 13.475447896287756 16 12.966813520443369 15.55463296799639 53.15461162993776 18.32394188162248 17 13.898730037608328 16.629537671530738 27.78377588544246 41.687956405418475 18 20.372975348743896 22.652784558667484 35.08707435501659 21.88716573757203 19 30.276965681675595 24.23064122025863 23.440205309233697 22.05218778883208 20 33.78162584409996 22.16977904672223 22.59572844537167 21.45286666380613 21 21.559904860090757 29.106503585141752 26.9905567493787 22.343034805388786 22 21.991188773397933 23.468617398171652 24.642210622874167 29.897983205556244 23 18.94170187253061 31.41600052881276 23.058091704945674 26.584205893710955 24 19.803921796015118 22.389769792498974 39.989029454638654 17.817278956847254 25 15.958896404885023 23.45446933755765 38.155232057186 22.431402200371327 26 15.204642419364752 37.402137748765234 26.5560257401929 20.837194091677112 27 16.557753659071167 36.20314759558349 28.223293506156143 19.015805239189202 28 13.111541222462018 28.118110793230734 42.28692962731457 16.48341835699268 29 13.118035414219264 23.209777469561374 40.835245834149944 22.83694128206942 30 17.17446994058974 30.631826874125167 31.894483300069933 20.299219885215162 31 31.07586723552694 25.42997927657023 22.28041224201533 21.213741245887498 32 31.841833959752247 26.73148488534852 24.25789363209708 17.168787522802152 33 28.61549630120989 28.169716424158857 22.75541598197398 20.459371292657274 34 18.34330848918427 28.778083030560968 26.65494619678097 26.223662283473793 35 18.540801499230554 26.515553009420056 31.238222029458118 23.70542346189127 36 31.694207064984823 23.41156128487584 25.370255905945548 19.523975744193788 37 19.544502028855085 32.741395485840926 28.60842227090289 19.1056802144011 38 19.621504588262447 33.5508501012978 22.171982433211294 24.655662877228465 39 19.93055853528144 32.03967487292838 26.527497683544993 21.50226890824519 40 24.124646733363562 25.716651455568712 24.456778254662773 25.701923556404953 41 16.29033211992453 23.688028305398646 26.73681940000626 33.284820174670564 42 23.135674102902787 25.079176953968936 22.66728052241134 29.117868420716935 43 23.320990503404232 26.329424834948956 23.923094853469003 26.426489808177813 44 20.791850717086334 30.801487633783246 26.87563274881742 21.531028900312997 45 16.375220483608544 39.630225360050744 20.332734553390956 23.661819602949755 46 22.849697730164014 33.62159040436781 24.33118522478601 19.19752664068217 47 22.114810352205534 27.437612271239196 25.376866065412745 25.070711311142524 48 23.606271069883302 22.562445712615776 30.5675807628124 23.263702454688516 49 20.994214370950555 21.925087178725956 32.720869201179624 24.359829249143868 50 18.737830638437032 33.432447069437984 26.054001523815707 21.775720768309274 51 17.07334609751261 35.94790266598169 22.41365914074885 24.565092095756857 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1040.0 1 1170.0 2 1300.0 3 3356.5 4 5413.0 5 4159.5 6 2906.0 7 3175.5 8 3445.0 9 3812.0 10 4179.0 11 4265.0 12 4351.0 13 4184.0 14 4017.0 15 3864.0 16 3711.0 17 3410.0 18 3109.0 19 2963.0 20 2817.0 21 2798.0 22 2779.0 23 3081.0 24 3383.0 25 3693.0 26 4718.0 27 5433.0 28 6304.0 29 7175.0 30 8347.5 31 9520.0 32 11310.5 33 13101.0 34 14101.0 35 15101.0 36 19371.5 37 23642.0 38 35928.5 39 48215.0 40 64270.0 41 80325.0 42 88448.0 43 96571.0 44 94948.5 45 93326.0 46 89450.5 47 85575.0 48 79241.0 49 72907.0 50 66060.0 51 59213.0 52 52092.5 53 44972.0 54 41058.5 55 37145.0 56 35003.5 57 32862.0 58 30271.5 59 27681.0 60 24962.0 61 22243.0 62 18552.5 63 14862.0 64 12242.5 65 9623.0 66 7804.5 67 5986.0 68 4998.5 69 4011.0 70 3324.0 71 2637.0 72 2168.5 73 1700.0 74 1382.5 75 798.0 76 531.0 77 400.5 78 270.0 79 184.5 80 99.0 81 63.5 82 28.0 83 18.0 84 8.0 85 12.5 86 17.0 87 12.5 88 8.0 89 4.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 862309.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.93550161421064 #Duplication Level Percentage of deduplicated Percentage of total 1 78.17258886143006 17.147549491569237 2 5.807015337992551 2.547595886405631 3 2.0465282095683315 1.3467486853354125 4 1.2367345192466386 1.0851356817313862 5 0.8330822911513849 0.9137038971160749 6 0.6669812200985892 0.8778340578072471 7 0.5682308974570967 0.8725100837890153 8 0.4451475083453508 0.7811627110297028 9 0.44147950894135574 0.8715667032921626 >10 7.988038142763286 44.33969453951425 >50 1.6429282448120228 23.831056377117733 >100 0.14858248956322226 4.536289436013618 >500 0.0010651074520661094 0.2155298210096087 >1k 0.0015976611780991641 0.6336226282688985 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2331 0.27032073189541106 No Hit CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1983 0.2299639688325183 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1110 0.12872415804543383 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCG 992 0.11503996827123456 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0339785390155965 0.0 2 0.0 0.0 0.0 0.11492400056128371 0.0 3 0.0 0.0 0.0 0.16397834187048957 0.0 4 0.0 0.0 0.0 0.26637782975708246 0.0 5 0.0 0.0 0.0 0.4730322888894816 0.0 6 0.0 0.0 0.0 0.6540578841227449 0.0 7 0.0 0.0 0.0 0.7609801126974205 0.0 8 0.0 0.0 0.0 0.9837540835129867 0.0 9 0.0 0.0 0.0 1.149355973322788 0.0 10 0.0 0.0 0.0 1.5528076362417649 0.0 11 0.0 0.0 0.0 1.8912014138783197 0.0 12 0.0 0.0 0.0 2.2157950340307244 0.0 13 0.0 0.0 0.0 2.3321106471114184 0.0 14 0.0 0.0 0.0 2.374554828953426 0.0 15 0.0 0.0 0.0 2.452833033170244 0.0 16 0.0 0.0 0.0 2.594429607020221 0.0 17 0.0 0.0 0.0 2.735562310030395 0.0 18 0.0 0.0 0.0 2.967961600771881 0.0 19 0.0 0.0 0.0 3.0723325397276384 0.0 20 0.0 0.0 0.0 3.178442994332658 0.0 21 0.0 0.0 0.0 3.337666660095163 0.0 22 0.0 0.0 0.0 3.4847137163128297 0.0 23 0.0 0.0 0.0 3.6631880219271746 0.0 24 0.0 0.0 0.0 3.783678472566099 0.0 25 0.0 0.0 0.0 3.885730057322839 0.0 26 0.0 0.0 0.0 3.9804756763526763 0.0 27 0.0 0.0 0.0 4.075801133932268 0.0 28 1.1596770995084129E-4 0.0 0.0 4.174489655100434 0.0 29 1.1596770995084129E-4 0.0 0.0 4.279092529476093 0.0 30 1.1596770995084129E-4 0.0 0.0 4.411527654239953 0.0 31 1.1596770995084129E-4 0.0 0.0 4.543730843583912 0.0 32 1.1596770995084129E-4 0.0 0.0 4.659582585824803 0.0 33 1.1596770995084129E-4 0.0 0.0 4.765924975849725 0.0 34 1.1596770995084129E-4 0.0 0.0 4.882124621220467 0.0 35 1.1596770995084129E-4 0.0 0.0 5.026040549269461 0.0 36 1.1596770995084129E-4 0.0 0.0 5.152793256245731 0.0 37 1.1596770995084129E-4 0.0 0.0 5.2742114485642615 0.0 38 1.1596770995084129E-4 0.0 0.0 5.39110690019471 0.0 39 1.1596770995084129E-4 0.0 0.0 5.514148640452553 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 205 0.0 45.000004 25 GTCTAAT 35 1.211447E-7 45.000004 33 ATAGACG 35 1.211447E-7 45.000004 1 TCCAATC 70 0.0 45.000004 23 CGGTCTA 205 0.0 45.000004 31 GTAACGA 35 1.211447E-7 45.000004 2 GCCCGAC 35 1.211447E-7 45.000004 9 AATCGGT 70 0.0 45.000004 26 TCTGCGT 20 7.0323056E-4 45.0 16 GTCATCG 20 7.0323056E-4 45.0 43 CGTGGTA 20 7.0323056E-4 45.0 37 ATCTCGA 20 7.0323056E-4 45.0 2 AGATCGA 25 3.8899918E-5 45.0 8 TCCGCGA 20 7.0323056E-4 45.0 2 CTCGTAG 25 3.8899918E-5 45.0 1 AGATACC 20 7.0323056E-4 45.0 8 CACGGAC 25 3.8899918E-5 45.0 3 CGACGGT 210 0.0 45.0 28 TCACACG 20 7.0323056E-4 45.0 45 CGCATCG 50 2.1827873E-11 45.0 21 >>END_MODULE