##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546915_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2099117 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.731174107970162 31.0 31.0 33.0 30.0 34.0 2 32.097680119783696 33.0 31.0 34.0 30.0 34.0 3 32.15082818156396 33.0 31.0 34.0 30.0 34.0 4 35.88224858357109 37.0 35.0 37.0 35.0 37.0 5 35.85922366404541 37.0 35.0 37.0 35.0 37.0 6 35.91194297411721 37.0 35.0 37.0 35.0 37.0 7 36.142958682150635 37.0 35.0 37.0 35.0 37.0 8 13.281434050603183 0.0 0.0 37.0 0.0 37.0 9 25.01030052160027 18.0 17.0 39.0 17.0 39.0 10 32.52395554892843 32.0 32.0 37.0 27.0 39.0 11 35.49711664476063 37.0 34.0 37.0 32.0 39.0 12 36.58332432160761 37.0 35.0 39.0 33.0 39.0 13 36.79061576843978 39.0 35.0 39.0 33.0 39.0 14 37.95796851723844 40.0 37.0 41.0 33.0 41.0 15 38.29880135314039 40.0 37.0 41.0 33.0 41.0 16 38.41090372761499 40.0 37.0 41.0 34.0 41.0 17 38.39507087980327 40.0 37.0 41.0 34.0 41.0 18 38.3592758288366 40.0 37.0 41.0 34.0 41.0 19 38.35105189467762 40.0 37.0 41.0 34.0 41.0 20 38.319824954969164 40.0 37.0 41.0 34.0 41.0 21 38.24396496241039 40.0 37.0 41.0 34.0 41.0 22 38.19979639057756 40.0 37.0 41.0 34.0 41.0 23 38.12019101365002 40.0 37.0 41.0 34.0 41.0 24 38.027216682062026 40.0 36.0 41.0 34.0 41.0 25 37.92977856879821 40.0 36.0 41.0 33.0 41.0 26 37.86371984029475 40.0 36.0 41.0 33.0 41.0 27 37.807211794292556 40.0 36.0 41.0 33.0 41.0 28 37.782604304571876 40.0 36.0 41.0 33.0 41.0 29 37.79804365359339 40.0 36.0 41.0 33.0 41.0 30 37.714344174240885 40.0 36.0 41.0 33.0 41.0 31 37.6369020878779 40.0 36.0 41.0 33.0 41.0 32 37.52145545007734 40.0 35.0 41.0 33.0 41.0 33 37.41008385907027 40.0 35.0 41.0 33.0 41.0 34 37.27514569221249 40.0 35.0 41.0 33.0 41.0 35 37.16262885775305 40.0 35.0 41.0 32.0 41.0 36 37.0485485087301 40.0 35.0 41.0 32.0 41.0 37 36.98806307604578 40.0 35.0 41.0 31.0 41.0 38 36.891460552222675 40.0 35.0 41.0 31.0 41.0 39 36.845132024560804 40.0 35.0 41.0 31.0 41.0 40 36.72190306686097 40.0 35.0 41.0 31.0 41.0 41 36.66084644162284 39.0 35.0 41.0 31.0 41.0 42 36.632693175273225 39.0 35.0 41.0 31.0 41.0 43 36.52442574663537 39.0 35.0 41.0 31.0 41.0 44 36.296898648336416 39.0 35.0 41.0 30.0 41.0 45 36.238233504849894 39.0 35.0 40.0 30.0 41.0 46 36.237221174427155 39.0 35.0 40.0 30.0 41.0 47 36.187536950060434 39.0 35.0 40.0 30.0 41.0 48 36.145042891844525 39.0 35.0 40.0 30.0 41.0 49 36.05683580286377 39.0 35.0 40.0 30.0 41.0 50 35.938295483291306 38.0 35.0 40.0 29.0 41.0 51 35.55459748075024 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 2.0 14 10.0 15 28.0 16 71.0 17 190.0 18 456.0 19 936.0 20 1834.0 21 3120.0 22 5067.0 23 7765.0 24 12012.0 25 17347.0 26 21862.0 27 24435.0 28 26512.0 29 30164.0 30 37589.0 31 49171.0 32 66218.0 33 91856.0 34 145382.0 35 226873.0 36 217110.0 37 382615.0 38 519751.0 39 210695.0 40 43.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.12660371003617 23.93830358193469 30.151249311019825 13.783843397009313 2 30.481578682846166 25.492957276797817 31.02885641915148 12.996607621204534 3 29.882755463368643 25.63053893613362 31.475615699363114 13.011089901134621 4 26.34855513056204 27.214204829935635 31.13318600154255 15.304054037959771 5 22.81959509641435 32.896927612896285 29.968362887823787 14.315114402865586 6 20.428732652824973 42.40154312503782 26.826613285490996 10.34311093664622 7 89.54384152955743 3.7395247620785312 5.483353238528391 1.2332804698356499 8 34.128493075898106 63.33767960528165 1.8431559555756063 0.6906713632446405 9 87.7299359683143 3.616282465436657 6.43341938538919 2.2203621808598566 10 45.85270854364001 23.16092909542441 18.906187697017366 12.08017466391821 11 41.20137181491075 21.976526320352797 20.46269931595047 16.35940254878599 12 36.656079675406374 23.00105234724887 23.68548299118153 16.65738498616323 13 24.131956436920856 35.18770035210043 24.124477101562228 16.555866109416485 14 17.511553667565934 38.4041956689408 28.008443550311867 16.0758071131814 15 16.822216198525382 25.667078109509855 41.348671846304896 16.162033845659867 16 20.19896937617103 20.859294646272694 40.249066631350225 18.69266934620605 17 19.431837291584987 21.36989029196562 27.64066986261366 31.557602553835736 18 22.318813100937206 25.797942658746507 31.803658395411023 20.079585844905264 19 27.77124857737801 26.962956328780148 24.806621069716456 20.45917402412538 20 29.336716343109988 26.076250156613472 23.930681329339908 20.656352170936636 21 24.425460800898662 27.067809941037112 29.221382133535194 19.28534712452903 22 23.305132586701934 22.95617633509709 27.508661975487787 26.230029102713186 23 20.025658407797184 29.398361310970277 26.589227756242266 23.98675252499027 24 20.552546618411455 26.777830868884394 34.32729095138575 18.3423315613184 25 20.64148877837681 26.30687093668433 32.39457352782146 20.6570667571174 26 18.490679652444335 32.8128446389601 25.489336706815298 23.207139001780273 27 18.622020592468168 31.3276010817882 29.722640519799516 20.327737805944118 28 16.533761576891617 28.31409587936261 36.47767132560977 18.674471218136006 29 18.37444030037392 27.08348319793513 34.1635554378341 20.37852106385685 30 20.18944156042755 28.231346799630515 32.20968626331929 19.369525376622647 31 28.164270976796434 26.729620121222396 24.63897915170998 20.467129750271184 32 28.139260460469806 27.678542930193984 25.797132794408316 18.385063814927896 33 26.02051243451413 26.564884187017686 25.88412175214626 21.530481626321926 34 19.797371942583478 28.52513699808062 28.089811096761164 23.58767996257474 35 20.04590501625207 26.20006412219995 29.590870828067228 24.163160033480743 36 27.814885973483133 25.905130585860626 26.752343961770592 19.527639478885643 37 21.00945302238989 30.660177588957644 27.47240863658386 20.857960752068607 38 21.04389607630256 32.488470151973424 23.998471738354745 22.46916203336927 39 20.49890501577568 29.57757952510508 25.819570800484204 24.103944658635037 40 22.996669552006868 25.659551135072512 26.14913794705107 25.19464136586955 41 19.3321286998295 23.98622849512438 28.362497183339467 28.31914562170665 42 22.502414110314003 27.057234065561854 24.421792591837423 26.01855923228672 43 22.493791437066157 26.70232292911734 25.668650199107528 25.135235434708974 44 20.4457874430058 29.783618540557764 27.498467212642268 22.27212680379417 45 19.925139951703503 33.147318610634855 24.12976503929986 22.797776398361787 46 23.42446847888898 29.495354475238873 26.88411365350288 20.19606339236927 47 21.90635395740209 28.43538497377707 26.183819196357327 23.474441872463515 48 22.593452389742925 27.020027945083573 28.315239217251825 22.071280447921673 49 21.836133955372663 25.204073903455598 29.394788380066476 23.565003761105267 50 21.24045491509049 29.831686370983608 27.19152862846616 21.73633008545974 51 19.420737386243836 31.76049739009307 26.264757991098165 22.55400723256493 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1442.0 1 2150.0 2 2858.0 3 9425.0 4 15992.0 5 11756.5 6 7521.0 7 7824.0 8 8127.0 9 8771.0 10 9415.0 11 9359.5 12 9304.0 13 8950.5 14 8597.0 15 8308.0 16 8019.0 17 7752.5 18 7486.0 19 7387.5 20 7289.0 21 7864.5 22 8440.0 23 9156.0 24 9872.0 25 11399.0 26 15679.0 27 18432.0 28 22300.5 29 26169.0 30 29739.5 31 33310.0 32 37326.5 33 41343.0 34 47830.0 35 54317.0 36 63915.0 37 73513.0 38 92987.5 39 112462.0 40 137505.0 41 162548.0 42 175376.5 43 188205.0 44 189458.0 45 190711.0 46 192124.5 47 193538.0 48 186248.5 49 178959.0 50 165941.0 51 152923.0 52 140019.0 53 127115.0 54 117291.0 55 107467.0 56 99139.0 57 90811.0 58 80922.5 59 71034.0 60 62366.0 61 53698.0 62 45359.0 63 37020.0 64 31293.0 65 25566.0 66 20648.5 67 15731.0 68 12892.5 69 10054.0 70 8651.0 71 7248.0 72 5867.0 73 4486.0 74 3325.0 75 1748.0 76 1332.0 77 1037.5 78 743.0 79 590.5 80 438.0 81 364.0 82 290.0 83 216.0 84 142.0 85 86.5 86 31.0 87 22.0 88 13.0 89 8.5 90 4.0 91 4.5 92 5.0 93 5.5 94 6.0 95 3.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2099117.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.912756411848306 #Duplication Level Percentage of deduplicated Percentage of total 1 76.85222517890503 15.303396396960512 2 6.129771568897508 2.441212962234586 3 2.317032230981768 1.3841549524182417 4 1.3558106380088548 1.0799170790105186 5 0.9997765468432651 0.9954153421784393 6 0.7535233684934215 0.9002836372466948 7 0.6374133566588149 0.8884859833363897 8 0.5407022269980476 0.8613497390044824 9 0.4826131884699465 0.8649142976832733 >10 7.607972891414182 37.87923439885032 >50 2.0043300761478346 27.298950075027996 >100 0.3105852492327043 8.280422707905936 >500 0.005818926316733735 0.8103718433757651 >1k 0.0021820973687751506 0.7305175074244088 >5k 2.4245526319723894E-4 0.2813730773425058 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5828 0.2776405507649169 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3137 0.14944378993643517 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2970 0.14148806379063197 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01100462718371582 0.0 2 0.0 0.0 0.0 0.028726364466582853 0.0 3 0.0 0.0 0.0 0.04382795241999374 0.0 4 0.0 0.0 0.0 0.06988652847840306 0.0 5 0.0 0.0 0.0 0.126005363207482 0.0 6 0.0 0.0 0.0 0.19350993775001585 0.0 7 0.0 0.0 0.002000841306130149 0.2335267638726188 0.0 8 0.0 0.0 0.002000841306130149 0.32204017212951924 0.0 9 0.0 0.0 0.002000841306130149 0.4348495105322857 0.0 10 0.0 0.0 0.002000841306130149 0.6255963817166933 0.0 11 0.0 0.0 0.002000841306130149 0.8297298340206858 0.0 12 0.0 0.0 0.002000841306130149 1.008900409076769 0.0 13 0.0 0.0 0.002000841306130149 1.0817881995143672 0.0 14 0.0 0.0 0.002000841306130149 1.1109433156894066 0.0 15 0.0 0.0 0.002000841306130149 1.1509601418120095 0.0 16 0.0 0.0 0.002000841306130149 1.2423795338706705 0.0 17 0.0 0.0 0.002000841306130149 1.346185086395851 0.0 18 0.0 0.0 0.002000841306130149 1.50029750604659 0.0 19 0.0 0.0 0.002000841306130149 1.576758227387992 0.0 20 0.0 0.0 0.002000841306130149 1.654552842933481 0.0 21 0.0 0.0 0.002000841306130149 1.7627411907006614 0.0 22 0.0 0.0 0.002000841306130149 1.873740244112167 0.0 23 0.0 0.0 0.002000841306130149 2.00246103480654 0.0 24 0.0 0.0 0.002000841306130149 2.0969293279031134 0.0 25 0.0 0.0 0.002000841306130149 2.179249655926754 0.0 26 0.0 0.0 0.002000841306130149 2.260045533431438 0.0 27 0.0 0.0 0.002000841306130149 2.3438903119740346 0.0 28 0.0 0.0 0.002000841306130149 2.4373105453388257 0.0 29 0.0 0.0 0.002000841306130149 2.5339225969776815 0.0 30 0.0 0.0 0.002000841306130149 2.6490662502376 0.0 31 0.0 0.0 0.002000841306130149 2.762113784033953 0.0 32 0.0 0.0 0.002000841306130149 2.858582918436657 0.0 33 0.0 0.0 0.002000841306130149 2.970344197107641 0.0 34 0.0 0.0 0.002000841306130149 3.0786754621109735 0.0 35 0.0 0.0 0.002000841306130149 3.221973810892866 0.0 36 4.76390787173845E-5 0.0 0.002000841306130149 3.3377844112548276 0.0 37 4.76390787173845E-5 0.0 0.002000841306130149 3.4559769655526584 0.0 38 4.76390787173845E-5 0.0 0.002000841306130149 3.592844038707704 0.0 39 4.76390787173845E-5 0.0 0.002000841306130149 3.7614863773672456 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCTCGA 20 7.034621E-4 45.0 19 CGATACG 20 7.034621E-4 45.0 10 ACGTTAG 65 0.0 44.999996 1 CGTTTTT 6425 0.0 43.354088 1 CGCATCG 405 0.0 43.333332 21 CACGACG 1485 0.0 43.18182 26 TAGTGCG 215 0.0 42.906975 1 CGGTCTA 1515 0.0 42.772274 31 CGACGGT 1510 0.0 42.615894 28 CGTTAGA 250 0.0 42.300003 2 AGGGGAA 20200 0.0 42.126236 8 ACGACGG 1530 0.0 41.911762 27 GAGGGGA 19865 0.0 41.885227 7 TCTCACG 1545 0.0 41.650486 23 ATTGCGA 245 0.0 41.32653 2 ACGGTCT 1560 0.0 41.250004 30 TCACGAC 1580 0.0 40.87025 25 TAACGCC 460 0.0 40.597828 12 GACGGTC 1595 0.0 40.485893 29 CTCACGA 1590 0.0 40.4717 24 >>END_MODULE