##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546914_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1343774 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.74937005776269 31.0 31.0 33.0 30.0 34.0 2 32.12302068651425 33.0 31.0 34.0 30.0 34.0 3 32.14442383912771 33.0 31.0 34.0 30.0 34.0 4 35.893630923057 37.0 35.0 37.0 35.0 37.0 5 35.88610212729224 37.0 35.0 37.0 35.0 37.0 6 35.92810547011626 37.0 35.0 37.0 35.0 37.0 7 36.16671032480164 37.0 35.0 37.0 35.0 37.0 8 13.262494288474103 0.0 0.0 37.0 0.0 37.0 9 25.002140985016826 18.0 17.0 39.0 17.0 39.0 10 32.549992781524274 32.0 32.0 37.0 27.0 39.0 11 35.49752041637954 37.0 34.0 37.0 32.0 39.0 12 36.66257049176424 37.0 35.0 39.0 33.0 39.0 13 36.95994936648573 39.0 37.0 39.0 33.0 39.0 14 38.13515888832497 40.0 37.0 41.0 33.0 41.0 15 38.407030497687856 40.0 38.0 41.0 34.0 41.0 16 38.490572075363865 40.0 38.0 41.0 34.0 41.0 17 38.456590914841335 40.0 37.0 41.0 34.0 41.0 18 38.39170053892991 40.0 37.0 41.0 34.0 41.0 19 38.379830239311076 40.0 37.0 41.0 34.0 41.0 20 38.35459682952639 40.0 37.0 41.0 34.0 41.0 21 38.29859931804009 40.0 37.0 41.0 34.0 41.0 22 38.23914958914222 40.0 37.0 41.0 34.0 41.0 23 38.13907770205407 40.0 37.0 41.0 34.0 41.0 24 38.042394777693275 40.0 36.0 41.0 34.0 41.0 25 37.93972275099831 40.0 36.0 41.0 33.0 41.0 26 37.88684630004748 40.0 36.0 41.0 33.0 41.0 27 37.83556609965664 40.0 36.0 41.0 33.0 41.0 28 37.77919352510169 40.0 36.0 41.0 33.0 41.0 29 37.79919614458979 40.0 36.0 41.0 33.0 41.0 30 37.686557412183895 40.0 36.0 41.0 33.0 41.0 31 37.60882335868978 40.0 36.0 41.0 33.0 41.0 32 37.463918783962185 40.0 36.0 41.0 33.0 41.0 33 37.30970460806653 40.0 36.0 41.0 33.0 41.0 34 37.11871490295243 40.0 35.0 41.0 32.0 41.0 35 36.95623222357331 40.0 35.0 41.0 31.0 41.0 36 36.83468871997821 40.0 35.0 41.0 31.0 41.0 37 36.7855859690692 40.0 35.0 41.0 31.0 41.0 38 36.693881560440964 40.0 35.0 41.0 31.0 41.0 39 36.61331072040388 40.0 35.0 41.0 31.0 41.0 40 36.50384141976255 40.0 35.0 41.0 30.0 41.0 41 36.43894881133286 39.0 35.0 41.0 30.0 41.0 42 36.39810414548875 39.0 35.0 41.0 30.0 41.0 43 36.302611153363586 39.0 35.0 41.0 30.0 41.0 44 36.13035897405367 39.0 35.0 41.0 30.0 41.0 45 36.03040020122431 39.0 35.0 40.0 29.0 41.0 46 36.00404829978851 39.0 35.0 40.0 29.0 41.0 47 35.95679630652178 39.0 35.0 40.0 29.0 41.0 48 35.8836753799374 39.0 35.0 40.0 29.0 41.0 49 35.78510002426003 39.0 35.0 40.0 28.0 41.0 50 35.677061023654275 38.0 35.0 40.0 28.0 41.0 51 35.32364817298147 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 2.0 13 4.0 14 15.0 15 22.0 16 53.0 17 87.0 18 261.0 19 597.0 20 1136.0 21 2070.0 22 3250.0 23 5301.0 24 8312.0 25 12731.0 26 16432.0 27 18068.0 28 18654.0 29 20180.0 30 24162.0 31 31354.0 32 41773.0 33 58335.0 34 90426.0 35 135983.0 36 142822.0 37 253057.0 38 321085.0 39 137562.0 40 39.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.22550815836592 22.73157539883939 29.58667156828455 15.456244874510148 2 32.4256906295255 24.71137259688013 30.543826566074355 12.319110207520016 3 29.03672790216212 23.95573958120934 33.749499543822104 13.258032972806438 4 25.8085064899306 26.351008428500627 33.38001777084539 14.460467310723379 5 23.831090644706624 31.212168117555482 31.225563227149806 13.73117801058809 6 21.44802623060128 40.116046299452144 27.90119469494126 10.53473277500532 7 87.61465841726361 3.5658525912839507 7.38003563099152 1.4394533604609108 8 33.327628008876495 63.384467923921726 2.5768469995698684 0.7110570676319083 9 85.50678908804605 3.5508203016281015 8.621166952180948 2.321223658144896 10 43.72372139958058 22.570089910952287 20.682718969112365 13.023469720354763 11 38.06242716409158 22.997542741562196 22.42936684293639 16.510663251409834 12 34.007057734410694 22.62820980313654 25.66465789634269 17.700074566110075 13 23.96280922238412 29.615173384810245 27.247587764013893 19.17442962879175 14 19.400137225456067 31.798501831409148 30.056914332320762 18.74444661081402 15 19.145258056786336 24.57585873815091 39.49235511328542 16.786528091777335 16 22.506314305828212 21.871907031986034 37.06099388736499 18.560784774820764 17 21.93791515537583 21.900111179409635 29.46522257462936 26.696751090585174 18 24.07138402737365 24.33697928371884 32.578469296176294 19.013167392731216 19 27.566912293287416 25.272776523433254 27.90238537134965 19.257925811929685 20 28.56135034611475 25.706033901534038 26.73626666388842 18.99634908846279 21 25.673513552130046 26.08757127314563 29.63422420734439 18.60469096737993 22 23.96965561173233 22.313573562221027 30.178735412353564 23.538035413693077 23 22.322578052559432 26.008688961090183 29.750836078090515 21.91789690825987 24 22.09158682933291 24.61336504501501 34.097400306896844 19.197647818755236 25 21.226560418641824 25.423620340920422 32.15719309943488 21.192626141002876 26 20.24737790729691 30.32466768965615 28.088651811986242 21.3393025910607 27 20.15123078731989 28.940134278531954 30.690503016132176 20.218131918015974 28 17.89132696420678 27.443305198642033 34.84201956579008 19.82334827136111 29 19.652039703104837 25.93695070748504 34.01338320283024 20.397626386579887 30 21.806419829524906 26.13073329294956 32.38572855256911 19.677118324956428 31 27.244387821166356 24.962754153600233 27.9602075944318 19.832650430801607 32 27.275568659610915 25.48836337062631 28.616791216380133 18.61927675338264 33 25.968057128654078 25.50525609217026 27.915631646392917 20.611055132782745 34 21.6226091589806 26.671970137835675 30.2758499569124 21.429570746271324 35 22.085707864566512 26.018884127836973 30.74683689370385 21.148571113892665 36 26.611543310110182 26.281279441334632 28.179589722676578 18.927587525878607 37 22.534816122353906 29.138902821456586 28.115069944797266 20.211211111392245 38 22.710589727141617 29.65148901526596 26.22025727540494 21.41766398218748 39 22.529160409414082 28.176389779829048 27.53096874920932 21.76348106154755 40 24.153689534103204 25.339379985027243 27.957528572512935 22.549401908356614 41 20.714643980312168 25.114416561118162 28.587024306170534 25.58391515239914 42 22.61898206097156 26.363733782615235 26.690202370339062 24.327081786074146 43 22.397962752665254 26.14055637331873 27.257931765311728 24.20354910870429 44 21.922436362066836 27.385557392835402 28.30632234289397 22.385683902203795 45 21.416622140330144 30.39863846152701 26.271158691863366 21.91358070627948 46 23.57822074247604 27.725346672878025 27.573758682635624 21.12267390201031 47 22.413739215076344 27.336739660091652 28.265392841355762 21.984128283476238 48 22.965394478535824 25.621570293814287 29.934051410430623 21.478983817219262 49 22.69927830126197 24.917508450081634 30.30494711164228 22.07826613701411 50 20.99594128179292 28.749551635914965 28.659060228877774 21.595446853414337 51 20.664412319333458 28.946087660573877 27.6731801627357 22.716319857356968 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 851.0 1 1511.5 2 2172.0 3 9970.5 4 17769.0 5 12477.5 6 7186.0 7 7125.0 8 7064.0 9 7245.0 10 7426.0 11 7308.0 12 7190.0 13 6838.5 14 6487.0 15 6161.0 16 5835.0 17 5672.0 18 5509.0 19 5403.5 20 5298.0 21 5485.0 22 5672.0 23 6287.0 24 6902.0 25 8017.5 26 11161.5 27 13190.0 28 15156.0 29 17122.0 30 20126.0 31 23130.0 32 25666.0 33 28202.0 34 32051.0 35 35900.0 36 42086.5 37 48273.0 38 58172.0 39 68071.0 40 78882.0 41 89693.0 42 97111.5 43 104530.0 44 106430.0 45 108330.0 46 108855.5 47 109381.0 48 106541.0 49 103701.0 50 100213.0 51 96725.0 52 90683.5 53 84642.0 54 78248.0 55 71854.0 56 66909.5 57 61965.0 58 58198.5 59 54432.0 60 48735.5 61 43039.0 62 37157.0 63 31275.0 64 25884.5 65 20494.0 66 16720.0 67 12946.0 68 10812.5 69 8679.0 70 7323.5 71 5968.0 72 4774.5 73 3581.0 74 2934.0 75 1705.0 76 1123.0 77 772.5 78 422.0 79 307.5 80 193.0 81 137.0 82 81.0 83 53.5 84 26.0 85 20.5 86 15.0 87 8.5 88 2.0 89 2.5 90 3.0 91 2.0 92 1.0 93 2.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1343774.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.076017642564867 #Duplication Level Percentage of deduplicated Percentage of total 1 71.9539596036163 18.04318760472682 2 5.875104705087572 2.946484584733837 3 2.8453875990487845 2.140529689010479 4 1.8903269263084725 1.8960748541730674 5 1.5161451177617775 1.9009440860841462 6 1.333251707297535 2.0059586000503633 7 1.1475435745488956 2.0143076044700043 8 1.0330980349948342 2.0724787641623648 9 0.9302619975515977 2.099453963653035 >10 11.125927155627483 57.99190594060343 >50 0.3231108127440438 4.927240697054888 >100 0.024395250162923585 1.0852340926654014 >500 8.925091498604581E-4 0.14883082500054196 >1k 2.97503049953486E-4 0.2555115667302537 >5k 2.97503049953486E-4 0.47185712688141745 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6325 0.4706892676893584 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3425 0.25487916866973165 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.441727552400925E-5 0.0 0.0 0.011683512257269452 0.0 2 7.441727552400925E-5 0.0 0.0 0.03490170222076033 0.0 3 7.441727552400925E-5 0.0 0.0 0.05447344568357477 0.0 4 7.441727552400925E-5 0.0 0.0 0.07999857118830994 0.0 5 7.441727552400925E-5 0.0 0.0 0.13871380157675323 0.0 6 7.441727552400925E-5 0.0 0.0 0.2179682000098231 0.0 7 7.441727552400925E-5 0.0 0.0 0.265520839069665 0.0 8 7.441727552400925E-5 0.0 0.0 0.36330513910821316 0.0 9 7.441727552400925E-5 0.0 0.0 0.49762832142904984 0.0 10 7.441727552400925E-5 0.0 0.0 0.7067408656515158 0.0 11 7.441727552400925E-5 0.0 0.0 0.9187556836194182 0.0 12 7.441727552400925E-5 0.0 0.0 1.0794969987512781 0.0 13 7.441727552400925E-5 0.0 0.0 1.1539886915508113 0.0 14 7.441727552400925E-5 0.0 0.0 1.1881462210163316 0.0 15 7.441727552400925E-5 0.0 0.0 1.2271408733909124 0.0 16 7.441727552400925E-5 0.0 0.0 1.3129439920700952 0.0 17 7.441727552400925E-5 0.0 0.0 1.4166816741505641 0.0 18 7.441727552400925E-5 0.0 0.0 1.5520466983287369 0.0 19 7.441727552400925E-5 0.0 0.0 1.6293662475981825 0.0 20 7.441727552400925E-5 0.0 0.0 1.7103322433683046 0.0 21 7.441727552400925E-5 0.0 0.0 1.8224790775829864 0.0 22 7.441727552400925E-5 0.0 0.0 1.9355189191039566 0.0 23 7.441727552400925E-5 0.0 0.0 2.058381840994096 0.0 24 7.441727552400925E-5 0.0 0.0 2.159514918431224 0.0 25 7.441727552400925E-5 0.0 0.0 2.2497086563663236 0.0 26 7.441727552400925E-5 0.0 0.0 2.334172264086074 0.0 27 7.441727552400925E-5 0.0 0.0 2.422431152857549 0.0 28 7.441727552400925E-5 0.0 0.0 2.5152294954359884 0.0 29 7.441727552400925E-5 0.0 0.0 2.6195625157206495 0.0 30 7.441727552400925E-5 0.0 0.0 2.737290645599632 0.0 31 7.441727552400925E-5 0.0 0.0 2.8472049615485937 0.0 32 7.441727552400925E-5 0.0 0.0 2.9503473054248706 0.0 33 7.441727552400925E-5 0.0 0.0 3.0600383695472604 0.0 34 7.441727552400925E-5 0.0 0.0 3.1750874775073785 0.0 35 7.441727552400925E-5 0.0 0.0 3.307178141562495 0.0 36 7.441727552400925E-5 0.0 0.0 3.422822587726805 0.0 37 7.441727552400925E-5 0.0 0.0 3.540922803983408 0.0 38 7.441727552400925E-5 0.0 0.0 3.686631829459418 0.0 39 7.441727552400925E-5 0.0 0.0 3.885251537832999 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAGTTA 20 7.033712E-4 45.000004 6 TGCGATA 20 7.033712E-4 45.000004 4 ACGTCGA 20 7.033712E-4 45.000004 2 CGAAGTA 20 7.033712E-4 45.000004 35 GCGTATG 55 1.8189894E-12 45.0 1 CGTTTTT 6310 0.0 43.00317 1 CGTAGGA 90 0.0 42.5 2 CGTATGG 65 0.0 41.53846 2 GTTACGA 65 0.0 41.53846 2 GAGCGAT 950 0.0 40.263157 7 CGTTTGA 135 0.0 40.000004 2 CCGCTCG 45 1.9286745E-8 40.0 19 GCGCGAC 390 0.0 39.807693 9 CGGTCTA 125 0.0 39.600002 31 GTTTTTA 4680 0.0 39.567307 2 CGCATCG 40 3.4588084E-7 39.375004 21 TTTAGCG 120 0.0 39.374996 1 GAGGGGA 8985 0.0 38.714523 7 ACCCGTA 35 6.24908E-6 38.571426 33 TTAGCGA 270 0.0 38.333336 2 >>END_MODULE