SRR1546903_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1546903_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2007476
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36601	1.8232347485100695	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20449	1.0186423150264312	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCATACG	25	3.89185E-5	45.0	1
CGTTTTT	32430	0.0	43.88298	1
GTTTTTA	21530	0.0	43.25476	2
TATGCGA	80	0.0	42.1875	2
CGGTCTA	365	0.0	41.30137	31
TATTTTT	23675	0.0	40.17212	7
TTATTTT	23695	0.0	40.157207	6
TTTTATT	24125	0.0	39.590675	4
AGACTTA	1745	0.0	39.58453	8
TTTATTT	24215	0.0	39.387775	5
CGCATCG	120	0.0	39.374996	21
ACGACGG	390	0.0	39.23077	27
CACGACG	400	0.0	38.8125	26
TCACGAC	415	0.0	38.493973	25
CTATCTC	1145	0.0	38.31878	6
TTTTTAT	25020	0.0	38.21043	3
CGACGGT	415	0.0	37.951805	28
ACGGTCT	405	0.0	37.77778	30
GAGACTT	2215	0.0	37.686226	7
TCTCACG	420	0.0	37.5	23