SRR1546899_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1546899_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3080828
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	79353	2.5757036744667343	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	43418	1.4092964618602533	No Hit
CGTTTCTATCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTT	4452	0.14450660666548085	No Hit
CGTTTTCAGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCT	3857	0.1251936167809433	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	51115	44.47178	1
GTTTTTA	34005	43.36568	2
CACGACG	875	43.199997	26
CGGTCTA	890	42.977528	31
CGACGGT	940	41.17021	28
ATAACGC	345	41.086956	11
TTATTTT	36580	40.57135	6
TGTACGA	250	40.500004	2
TCTCACG	935	40.427807	23
ACGACGG	935	40.427807	27
TATTTTT	36810	40.29951	7
AGACTTA	2435	40.287476	8
TTTATTT	37225	39.91068	5
TTTTATT	37530	39.694244	4
TCACGAC	960	39.60938	25
GACGGTC	985	39.289337	29
CGTAAGA	235	39.255318	2
CTATCTC	2435	39.086243	6
ACGGTCT	970	38.96907	30
GCGCGAC	1300	38.76923	9