##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546898_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1360030 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.679031344896803 31.0 31.0 34.0 30.0 34.0 2 32.024570781526876 31.0 31.0 34.0 30.0 34.0 3 31.92823320073822 31.0 31.0 34.0 30.0 34.0 4 35.75919207664537 37.0 35.0 37.0 35.0 37.0 5 35.79036785953251 37.0 35.0 37.0 35.0 37.0 6 35.84293287648067 37.0 35.0 37.0 35.0 37.0 7 36.059253104710926 37.0 35.0 37.0 35.0 37.0 8 13.140004999889708 0.0 0.0 35.0 0.0 37.0 9 24.807922619353985 18.0 17.0 38.0 17.0 39.0 10 32.58607604244024 32.0 32.0 37.0 27.0 39.0 11 35.53923222281861 37.0 35.0 37.0 32.0 39.0 12 36.7090299478688 38.0 35.0 39.0 33.0 39.0 13 37.01269163180224 39.0 37.0 39.0 33.0 39.0 14 38.242334360271464 40.0 37.0 41.0 33.0 41.0 15 38.452442225539144 40.0 38.0 41.0 34.0 41.0 16 38.49991103137431 40.0 38.0 41.0 34.0 41.0 17 38.44338139599862 40.0 38.0 41.0 34.0 41.0 18 38.3421909810813 40.0 37.0 41.0 34.0 41.0 19 38.278847525422236 40.0 37.0 41.0 34.0 41.0 20 38.203908737307266 40.0 37.0 41.0 34.0 41.0 21 38.14212333551466 40.0 37.0 41.0 33.0 41.0 22 38.102115394513355 40.0 37.0 41.0 33.0 41.0 23 37.897086828967005 39.0 36.0 41.0 33.0 41.0 24 37.61052256200231 39.0 35.0 41.0 33.0 41.0 25 37.5086034866878 39.0 35.0 41.0 33.0 41.0 26 37.43107652037087 39.0 35.0 41.0 33.0 41.0 27 37.375938030778734 39.0 35.0 41.0 33.0 41.0 28 37.207258663411835 39.0 35.0 41.0 33.0 41.0 29 37.12696190525209 39.0 35.0 41.0 33.0 41.0 30 36.94179172518253 39.0 35.0 41.0 32.0 41.0 31 36.772084439313836 39.0 35.0 41.0 31.0 41.0 32 36.433053682639354 39.0 35.0 41.0 30.0 41.0 33 36.08096806688088 39.0 35.0 41.0 29.0 41.0 34 35.66763380219554 39.0 35.0 41.0 25.0 41.0 35 35.37144621809813 39.0 35.0 41.0 23.0 41.0 36 35.18201216149644 39.0 35.0 41.0 22.0 41.0 37 35.13133533819107 39.0 35.0 41.0 22.0 41.0 38 35.008431431659595 39.0 35.0 41.0 21.0 41.0 39 34.899511040197645 39.0 35.0 40.0 21.0 41.0 40 34.78657529613317 39.0 34.0 40.0 21.0 41.0 41 34.69059432512518 38.0 34.0 40.0 20.0 41.0 42 34.60762997875047 38.0 34.0 40.0 19.0 41.0 43 34.479797504466816 38.0 34.0 40.0 18.0 41.0 44 34.2737263148607 38.0 34.0 40.0 18.0 41.0 45 34.174110865201506 38.0 34.0 40.0 18.0 41.0 46 34.130174334389686 38.0 34.0 40.0 18.0 41.0 47 34.078982816555516 38.0 33.0 40.0 18.0 41.0 48 33.98833775725535 37.0 33.0 40.0 18.0 41.0 49 33.877812989419354 37.0 33.0 40.0 18.0 41.0 50 33.77076093909693 37.0 33.0 40.0 18.0 41.0 51 33.437485937810195 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 4.0 13 7.0 14 14.0 15 36.0 16 88.0 17 210.0 18 524.0 19 1190.0 20 2282.0 21 3892.0 22 6293.0 23 10104.0 24 16078.0 25 24342.0 26 31157.0 27 32711.0 28 30403.0 29 29392.0 30 30934.0 31 36935.0 32 46312.0 33 62071.0 34 90339.0 35 130793.0 36 146508.0 37 235695.0 38 273084.0 39 118601.0 40 30.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.5089446556326 20.21727461894223 24.09902722734057 21.174753498084602 2 41.028727307485866 21.827533216179056 24.914156305375617 12.229583170959463 3 28.925906046190157 22.780673955721564 35.56340668955832 12.730013308529958 4 25.21091446512209 24.797247119548835 34.92592075174812 15.065917663580949 5 22.14524679602656 28.369815371719742 34.29666992639868 15.18826790585502 6 20.384991507540278 36.84058439887355 32.80773218237833 9.96669191120784 7 77.43248310699029 4.542105688845099 15.66075748329081 2.3646537208738043 8 28.63245663698595 64.24483283456982 5.77457850194481 1.3481320264994154 9 71.54474533649993 6.220892186201775 17.579538686646618 4.654823790651677 10 38.08063057432557 25.48002617589318 23.246766615442308 13.192576634338948 11 31.426292067086752 23.37448438637383 29.685962809643907 15.513260736895509 12 28.267979382807734 20.700425725903106 34.61203061697169 16.419564274317477 13 22.589354646588678 25.02856554634824 34.377991661948634 18.004088145114448 14 18.702822731851505 27.60909685815754 35.85266501474232 17.835415395248635 15 18.55422306860878 22.18848113644552 41.69165386057661 17.565641934369093 16 21.480334992610455 20.45888693631758 39.86691470041102 18.193863370660942 17 20.93042065248561 20.559105313853372 34.65033859547216 23.860135438188866 18 23.222575972588842 21.97804460195731 35.58649441556436 19.212885009889487 19 25.032756630368446 24.280126173687343 31.776210818878997 18.910906377065213 20 26.985728255994353 22.82559943530657 31.462173628522898 18.726498680176174 21 24.301155121578198 24.35255104666809 32.84295199370602 18.50334183804769 22 23.053756167143373 21.951354014249684 33.467276457136975 21.527613361469967 23 22.244362256714926 24.46835731564745 32.53972338845467 20.747557039182958 24 22.07686595148636 22.99243399042668 35.38304302110983 19.547657036977125 25 21.750917259178106 23.49462879495305 33.808298346360004 20.946155599508835 26 19.97632405167533 25.033712491636212 33.316765071358724 21.673198385329737 27 20.491974441740254 23.968662455975238 34.386962052307666 21.152401049976838 28 19.2961919957648 25.180694543502717 36.34669823459777 19.17641522613472 29 21.123284045204883 24.158364153731902 35.16194495709654 19.556406843966677 30 22.016352580457784 23.44095350837849 35.365984573869696 19.176709337294028 31 25.696124350198158 22.794717763578745 31.506143246840146 20.003014639382954 32 25.560097939016053 24.513062211862973 31.288721572318256 18.638118276802718 33 24.967463953001037 24.273361617023152 30.538296949332 20.22087748064381 34 22.003558745027682 25.417527554539237 32.91978853407645 19.659125166356624 35 21.81216590810497 26.101630111100487 31.86723822268626 20.218965758108276 36 24.459313397498583 26.96411108578487 30.006985140033677 18.569590376682868 37 23.15640096174349 27.531598567678657 29.31898561061153 19.993014859966323 38 22.008705690315654 29.134283802563175 28.247465129445676 20.60954537767549 39 22.80265876488019 26.231333132357378 28.74149834930112 22.224509753461323 40 23.204782247450424 25.200326463386837 29.64978713704845 21.945104152114293 41 20.667926442799057 25.68193348676132 29.70574178510768 23.944398285331943 42 22.3320073821901 26.286626030308152 28.038278567384545 23.343088020117204 43 22.201789666404416 26.12258553120152 28.56503165371352 23.110593148680543 44 22.174290273008683 26.871466070601386 29.54912759277369 21.405116063616244 45 21.66268391138431 27.80600427931737 28.39378543120372 22.137526378094602 46 22.592442813761462 27.221237766813967 29.33994103071256 20.846378388712015 47 21.71466805879282 26.721616434931583 30.42491709741697 21.138798408858626 48 22.159658242832876 25.64708131438277 30.873951309897574 21.319309132886772 49 22.025249443026993 25.034080130585355 30.64101527172195 22.299655154665707 50 20.54712028411138 26.353462791261954 31.17806224862687 21.921354675999794 51 20.504327110431387 27.09013771755035 30.198525032536043 22.207010139482218 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1107.0 1 2208.5 2 3310.0 3 24473.0 4 45636.0 5 31031.0 6 16426.0 7 16126.5 8 15827.0 9 15782.0 10 15737.0 11 15264.0 12 14791.0 13 14249.0 14 13707.0 15 12877.0 16 12047.0 17 11391.5 18 10736.0 19 10407.0 20 10078.0 21 9898.0 22 9718.0 23 9799.5 24 9881.0 25 10450.5 26 12138.5 27 13257.0 28 14799.5 29 16342.0 30 18264.5 31 20187.0 32 23398.0 33 26609.0 34 29906.0 35 33203.0 36 36857.5 37 40512.0 38 46742.0 39 52972.0 40 59435.0 41 65898.0 42 70397.5 43 74897.0 44 79120.0 45 83343.0 46 88690.5 47 94038.0 48 94187.5 49 94337.0 50 92155.0 51 89973.0 52 84810.5 53 79648.0 54 75907.5 55 72167.0 56 70573.0 57 68979.0 58 66485.5 59 63992.0 60 59280.5 61 54569.0 62 48288.5 63 42008.0 64 35442.0 65 28876.0 66 23900.0 67 18924.0 68 15892.5 69 12861.0 70 11002.5 71 9144.0 72 7598.0 73 6052.0 74 4883.5 75 2800.5 76 1886.0 77 1371.0 78 856.0 79 668.5 80 481.0 81 306.5 82 132.0 83 105.0 84 78.0 85 55.0 86 32.0 87 21.5 88 11.0 89 15.5 90 20.0 91 14.0 92 8.0 93 4.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1360030.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.088746287731766 #Duplication Level Percentage of deduplicated Percentage of total 1 71.29413634654331 24.30327725720271 2 6.94926026891407 4.737831403888528 3 3.757100162926171 3.8422450269475785 4 2.7231895143774585 3.7132046579609863 5 2.1425719827474854 3.651879636154072 6 1.7963427703133221 3.6741043765807238 7 1.5099701321622652 3.6031092116132584 8 1.2882875380305783 3.5132885623656773 9 1.1428902946922692 3.506372756142818 >10 7.320498274707958 40.49535334756901 >50 0.050807885331608266 1.1539241763094 >100 0.02341313024376732 1.5238201258954462 >500 8.752565770056799E-4 0.21198761766747887 >1k 2.1881414425141998E-4 0.09726666201210149 >5k 2.1881414425141998E-4 0.7010062036731057 >10k+ 2.1881414425141998E-4 1.271328978017069 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17044 1.2532076498312537 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9398 0.6910141688050999 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.006249862135394072 0.0 2 0.0 0.0 0.0 0.03286692205319 0.0 3 0.0 0.0 0.0 0.05396939773387352 0.0 4 0.0 0.0 0.0 0.08301287471599891 0.0 5 0.0 0.0 0.0 0.1609523319338544 0.0 6 0.0 0.0 0.0 0.27933207355720097 0.0 7 0.0 0.0 0.0 0.35131577979897505 0.0 8 0.0 0.0 0.0 0.49837135945530614 0.0 9 0.0 0.0 0.0 0.8296875804210201 0.0 10 0.0 0.0 0.0 1.3565141945398262 0.0 11 0.0 0.0 0.0 1.6472430755203928 0.0 12 0.0 0.0 0.0 1.9282662882436417 0.0 13 0.0 0.0 0.0 2.0606163099343395 0.0 14 0.0 0.0 0.0 2.1342176275523332 0.0 15 0.0 0.0 0.0 2.199730888289229 0.0 16 0.0 0.0 0.0 2.2895818474592473 0.0 17 0.0 0.0 0.0 2.3861238355036285 0.0 18 0.0 0.0 0.0 2.534797026536179 0.0 19 0.0 0.0 0.0 2.6175893178826937 0.0 20 0.0 0.0 0.0 2.702146276185084 0.0 21 0.0 0.0 0.0 2.7884679014433504 0.0 22 0.0 0.0 0.0 2.8889803901384528 0.0 23 0.0 0.0 0.0 2.9958897965486058 0.0 24 0.0 0.0 0.0 3.088902450681235 0.0 25 0.0 0.0 0.0 3.166253685580465 0.0 26 0.0 0.0 0.0 3.2431637537407263 0.0 27 0.0 0.0 0.0 3.3310294625853842 0.0 28 0.0 0.0 0.0 3.421615699653684 0.0 29 0.0 0.0 0.0 3.5085255472305756 0.0 30 0.0 0.0 0.0 3.6326404564605195 0.0 31 0.0 0.0 0.0 3.7274177775490247 0.0 32 0.0 0.0 0.0 3.8551355484805483 0.0 33 0.0 0.0 0.0 3.971677095358191 0.0 34 0.0 0.0 0.0 4.077704168290405 0.0 35 0.0 0.0 0.0 4.197039771181518 0.0 36 0.0 0.0 0.0 4.313654845848989 0.0 37 0.0 0.0 0.0 4.427622920082645 0.0 38 0.0 0.0 0.0 4.5872517517995925 0.0 39 0.0 0.0 0.0 4.762468474960111 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTCGA 20 7.0337433E-4 45.0 14 CGTAAGA 80 0.0 45.0 2 ACGCGTA 25 3.891184E-5 45.0 15 CGTTTTT 14895 0.0 43.62538 1 TATAGCG 75 0.0 42.000004 1 GTTTTTA 10115 0.0 41.9303 2 CGGTCTA 245 0.0 39.489796 31 TATTTTT 11515 0.0 38.53235 7 TTATTTT 11515 0.0 38.47373 6 TCACGAC 235 0.0 38.29787 25 TTTTATT 11730 0.0 37.97954 4 CGACGGT 255 0.0 37.941177 28 TTTATTT 11715 0.0 37.932137 5 ACACGAC 405 0.0 37.777775 26 GAGCGAT 1125 0.0 37.6 7 CACGACG 240 0.0 37.499996 26 ACGACGG 240 0.0 37.499996 27 TCTCACG 255 0.0 37.058823 23 TTTTTAT 12035 0.0 36.96095 3 CGAGTAC 55 2.750312E-9 36.81818 6 >>END_MODULE