SRR1546895_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1546895_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1138126
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22082	1.9402069718115569	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12491	1.097505900049731	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	18655	44.191906	1
GTTTTTA	12715	43.035786	2
TCACGAC	180	41.250004	25
TAGCCGT	105	40.714287	44
GTAGCCG	105	40.714287	43
CACGACC	490	40.408165	27
TTATTTT	14010	40.230194	6
TATTTTT	14000	40.194645	7
CACGACG	185	40.135136	26
CGGTCTA	185	40.135136	31
AGACTTA	890	39.69101	8
TTTATTT	14230	39.560787	5
TTTGCGA	195	39.23077	2
TTTTATT	14395	39.185482	4
CGCCGTT	75	39.000004	26
ACACGAC	495	38.636364	26
ACGACCA	510	38.382355	28
CGACGGT	195	38.076923	28
TTTTTAT	14845	37.861233	3
TAGAGGC	500	37.35	5