##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546895_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1138126 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.701654298381726 31.0 31.0 34.0 30.0 34.0 2 32.052010058640256 33.0 31.0 34.0 30.0 34.0 3 31.87891498832291 31.0 31.0 34.0 30.0 34.0 4 35.75332432437182 37.0 35.0 37.0 35.0 37.0 5 35.810347009030636 37.0 35.0 37.0 35.0 37.0 6 35.86709204429035 37.0 35.0 37.0 35.0 37.0 7 36.11022593280533 37.0 35.0 37.0 35.0 37.0 8 13.252113562118781 0.0 0.0 36.0 0.0 37.0 9 24.925739329388836 18.0 17.0 39.0 17.0 39.0 10 32.67050660471688 32.0 32.0 38.0 27.0 39.0 11 35.59972885251721 37.0 35.0 37.0 32.0 39.0 12 36.81410054774252 39.0 35.0 39.0 33.0 39.0 13 37.16048750314113 39.0 37.0 39.0 34.0 39.0 14 38.402189212793665 40.0 38.0 41.0 34.0 41.0 15 38.59460024636991 40.0 38.0 41.0 34.0 41.0 16 38.620695775335946 40.0 38.0 41.0 34.0 41.0 17 38.56475908642804 40.0 38.0 41.0 34.0 41.0 18 38.44032910240167 40.0 38.0 41.0 34.0 41.0 19 38.34245856785628 40.0 37.0 41.0 34.0 41.0 20 38.24671521430843 40.0 37.0 41.0 34.0 41.0 21 38.190275066205324 40.0 37.0 41.0 34.0 41.0 22 38.147788557681665 40.0 36.0 41.0 34.0 41.0 23 37.88920295292437 39.0 36.0 41.0 33.0 41.0 24 37.45869438005985 39.0 35.0 41.0 33.0 41.0 25 37.33749426689136 39.0 35.0 41.0 33.0 41.0 26 37.27088125567819 39.0 35.0 41.0 33.0 41.0 27 37.22336191247718 39.0 35.0 41.0 33.0 41.0 28 37.059851018252814 39.0 35.0 41.0 33.0 41.0 29 36.925177001491924 39.0 35.0 41.0 33.0 41.0 30 36.720660102659984 39.0 35.0 41.0 32.0 41.0 31 36.48729666135384 39.0 35.0 41.0 31.0 41.0 32 36.06189736461516 39.0 35.0 41.0 30.0 41.0 33 35.553153165818195 39.0 35.0 41.0 25.0 41.0 34 35.02090014638098 39.0 35.0 41.0 21.0 41.0 35 34.61626304996108 39.0 34.0 41.0 18.0 41.0 36 34.38645545396555 39.0 34.0 41.0 16.0 41.0 37 34.30711274498606 39.0 34.0 41.0 15.0 41.0 38 34.152397889161655 38.0 34.0 40.0 15.0 41.0 39 34.01694276380647 38.0 34.0 40.0 15.0 41.0 40 33.87859077114485 38.0 33.0 40.0 15.0 41.0 41 33.751726961689656 38.0 33.0 40.0 12.0 41.0 42 33.65469640444028 38.0 33.0 40.0 12.0 41.0 43 33.53386268304212 38.0 33.0 40.0 12.0 41.0 44 33.278241600666355 38.0 33.0 40.0 10.0 41.0 45 33.212646930129004 37.0 33.0 40.0 10.0 41.0 46 33.169802816208396 37.0 33.0 40.0 10.0 41.0 47 33.14148609204956 37.0 33.0 40.0 10.0 41.0 48 33.04717228145214 37.0 32.0 40.0 10.0 41.0 49 32.93926595122157 37.0 32.0 40.0 10.0 41.0 50 32.848299748885445 36.0 32.0 40.0 10.0 41.0 51 32.52924280791406 36.0 31.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 4.0 14 13.0 15 28.0 16 61.0 17 199.0 18 501.0 19 1089.0 20 2073.0 21 3475.0 22 5837.0 23 9579.0 24 16003.0 25 25556.0 26 34022.0 27 35346.0 28 31840.0 29 28303.0 30 28117.0 31 31025.0 32 38429.0 33 50081.0 34 71378.0 35 103950.0 36 118177.0 37 189547.0 38 215957.0 39 97506.0 40 26.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.489089960162584 19.42904388442053 24.07387231290736 27.00799384250953 2 43.97948908996016 20.485868875678086 24.498693466277018 11.035948568084729 3 26.364479855481733 21.746274138364292 40.260744416699026 11.628501589454947 4 23.288106940707795 23.383351228247136 39.77916329123489 13.549378539810178 5 20.784605570912184 27.200503283467736 38.92389770552646 13.090993440093628 6 18.570263749356396 35.01536736705778 36.604646585703165 9.80972229788266 7 74.78196614434606 3.3374160681681997 20.055424443339316 1.82519334414643 8 28.16902522216345 63.50729181127572 7.338642645893337 0.9850403206674833 9 71.00672509019212 4.2194800927138125 21.522309480672615 3.251485336421451 10 34.15895955280874 23.342758183188856 28.14872869963431 14.349553564368092 11 27.97449491532572 23.233455698226734 33.251678636636015 15.540370749811533 12 24.493773097179048 20.19003168366244 38.0342773998661 17.281917819292417 13 22.02436285613368 20.4903499261066 38.71645142980654 18.76883578795318 14 18.76699064954144 23.665745268977247 39.828630573416305 17.738633508065014 15 18.744146078729422 21.722990248882812 41.85274741109508 17.680116261292685 16 21.87156782289483 20.27332650339242 40.564840799700555 17.29026487401219 17 21.090195637389886 20.4223433960739 38.544941421248616 19.942519545287603 18 22.679386992301378 21.367669309022023 37.962141274340446 17.990802424336145 19 23.47059991600227 23.575509214269776 35.30953514812947 17.644355721598487 20 24.789434561726907 22.62587797836092 34.928557997972106 17.65612946194007 21 23.45610239991003 22.92224235277992 36.748391654351096 16.87326359295895 22 21.798553060030258 19.918181290999414 37.99869258763968 20.284573061330644 23 21.234028569771713 23.283450162811498 36.828611243394846 18.653910024021943 24 21.167339995747394 22.532654556701104 37.836144679938776 18.463860767612726 25 22.119782871140806 21.712007282146264 36.46661265975823 19.701597186954693 26 20.030383279179986 22.944823332390264 36.370226143678295 20.65456724475146 27 20.104891725520723 21.469503376603292 37.82472239453277 20.600882503343215 28 19.278006125859527 23.679979193867815 38.15632012624262 18.885694554030046 29 21.1730511384504 23.69930921532414 36.908040058833556 18.219599587391905 30 21.790645323979945 21.556752064358427 38.27036725283492 18.382235358826705 31 24.06842476140603 21.695664627642284 35.35750874683471 18.878401864116977 32 23.79938600822756 23.099463504040855 35.051040043018084 18.050110444713503 33 22.90642688067929 23.108601332365662 33.944835633313005 20.04013615364204 34 21.574412674870796 25.16654570759301 34.92952449904492 18.329517118491275 35 21.40738371674138 25.294211712938637 33.59935543164816 19.699049138671818 36 23.10051786884756 27.35558277378779 30.69238379581874 18.85151556154591 37 23.178101545874537 26.83279355712812 29.839402667191507 20.14970222980584 38 22.91679480127859 27.746224934673315 29.446388185490886 19.890592078557205 39 23.265174506161884 25.213464941491537 29.118568594338413 22.402791958008166 40 23.234246471831767 24.66739183535039 31.256029648738366 20.842332044079477 41 21.276203162040055 25.631520587351485 30.894294656303433 22.197981594305023 42 22.438288906500688 27.135571984121263 29.129112242405498 21.297026866972548 43 21.92885497739266 26.052651463897668 29.74653070046726 22.271962858242407 44 22.29041424235981 26.08964209586636 30.638084008273246 20.981859653500578 45 22.48274795585023 25.315474736540594 30.548550863436912 21.65322644417226 46 22.520968680093418 25.678703412451696 31.074415310782815 20.72591259667207 47 22.29305015437658 26.32827999711807 31.08056577215528 20.29810407635007 48 21.769645891579668 25.84959837487238 31.572954136888182 20.807801596659772 49 22.381704661873993 24.856474590686794 31.658533413699363 21.10328733373985 50 20.52039932309779 24.805513625029217 33.103803972495136 21.570283079377855 51 20.84936114279087 25.44885188458923 32.52566060348327 21.176126369136632 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 769.0 1 1846.5 2 2924.0 3 30545.0 4 58166.0 5 39276.5 6 20387.0 7 19617.5 8 18848.0 9 18633.5 10 18419.0 11 17807.5 12 17196.0 13 16273.0 14 15350.0 15 14442.5 16 13535.0 17 12394.5 18 11254.0 19 10330.0 20 9406.0 21 8944.5 22 8483.0 23 8267.5 24 8052.0 25 8560.0 26 9668.5 27 10269.0 28 11388.5 29 12508.0 30 14000.0 31 15492.0 32 17500.0 33 19508.0 34 21619.0 35 23730.0 36 26637.5 37 29545.0 38 33088.5 39 36632.0 40 40734.0 41 44836.0 42 48349.5 43 51863.0 44 56979.0 45 62095.0 46 67458.0 47 72821.0 48 74292.5 49 75764.0 50 74579.5 51 73395.0 52 70287.0 53 67179.0 54 64855.0 55 62531.0 56 61265.0 57 59999.0 58 57235.0 59 54471.0 60 50242.5 61 46014.0 62 40493.5 63 34973.0 64 29536.0 65 24099.0 66 20343.5 67 16588.0 68 14362.0 69 12136.0 70 10351.5 71 8567.0 72 7079.5 73 5592.0 74 4312.0 75 2241.5 76 1451.0 77 1031.0 78 611.0 79 466.0 80 321.0 81 236.0 82 151.0 83 106.5 84 62.0 85 43.5 86 25.0 87 14.0 88 3.0 89 2.5 90 2.0 91 2.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1138126.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.16862561716146 #Duplication Level Percentage of deduplicated Percentage of total 1 67.80815972582994 31.30609540170528 2 11.45910803519762 10.58102537567291 3 6.696936296007393 9.275650338970358 4 4.413576027392737 8.15074956966296 5 2.8105005289275016 6.487847335844403 6 1.9492375281220904 5.399617060487401 7 1.368377878711619 4.422328818952962 8 0.9505624869143603 3.5108930867253627 9 0.6490298898879304 2.6968336200525043 >10 1.8392068918792588 12.035886877591265 >50 0.03342359028025973 1.0369518789692365 >100 0.02111336272633625 1.9409535324619895 >500 3.838790614942871E-4 0.09145155034956873 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 3.838790614942871E-4 3.063715552553915 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22082 1.9402069718115569 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12491 1.097505900049731 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.786373389238098E-5 0.0 0.0 0.004744641630188573 0.0 2 8.786373389238098E-5 0.0 0.0 0.019505748924108578 0.0 3 8.786373389238098E-5 0.0 0.0 0.0411202274616343 0.0 4 1.7572746778476197E-4 0.0 0.0 0.06510702681425432 0.0 5 1.7572746778476197E-4 0.0 0.0 0.12494222959496576 0.0 6 1.7572746778476197E-4 0.0 0.0 0.2846784978113144 0.0 7 1.7572746778476197E-4 0.0 0.0 0.3878305214009697 0.0 8 1.7572746778476197E-4 0.0 0.0 0.5597798486283593 0.0 9 1.7572746778476197E-4 0.0 0.0 0.9060508238982327 0.0 10 1.7572746778476197E-4 0.0 0.0 1.3494990888530796 0.0 11 1.7572746778476197E-4 0.0 0.0 1.5896306735809567 0.0 12 1.7572746778476197E-4 0.0 0.0 1.778801292651253 0.0 13 1.7572746778476197E-4 0.0 0.0 1.8990867443499226 0.0 14 1.7572746778476197E-4 0.0 0.0 1.9735951906906617 0.0 15 1.7572746778476197E-4 0.0 0.0 2.028334296905615 0.0 16 1.7572746778476197E-4 0.0 0.0 2.0905418205014206 0.0 17 1.7572746778476197E-4 0.0 0.0 2.1525736166294416 0.0 18 1.7572746778476197E-4 0.0 0.0 2.2563406863563436 0.0 19 1.7572746778476197E-4 0.0 0.0 2.316615207806517 0.0 20 1.7572746778476197E-4 0.0 0.0 2.381722234620771 0.0 21 1.7572746778476197E-4 0.0 0.0 2.4505195382585057 0.0 22 1.7572746778476197E-4 0.0 0.0 2.5231828461875048 0.0 23 1.7572746778476197E-4 0.0 0.0 2.5996242946738763 0.0 24 1.7572746778476197E-4 0.0 0.0 2.6723754663367676 0.0 25 1.7572746778476197E-4 0.0 0.0 2.739327631562762 0.0 26 1.7572746778476197E-4 0.0 0.0 2.807861343998819 0.0 27 1.7572746778476197E-4 0.0 0.0 2.882721245275128 0.0 28 1.7572746778476197E-4 0.0 0.0 2.9594262849631763 0.0 29 1.7572746778476197E-4 0.0 0.0 3.0396458740069203 0.0 30 1.7572746778476197E-4 0.0 0.0 3.1453459458794546 0.0 31 1.7572746778476197E-4 0.0 0.0 3.233561134707405 0.0 32 1.7572746778476197E-4 0.0 0.0 3.353231540268828 0.0 33 1.7572746778476197E-4 0.0 0.0 3.4441705048474422 0.0 34 1.7572746778476197E-4 0.0 0.0 3.538975473717321 0.0 35 1.7572746778476197E-4 0.0 0.0 3.6388765391529585 0.0 36 1.7572746778476197E-4 0.0 0.0 3.7420285627426138 0.0 37 1.7572746778476197E-4 0.0 0.0 3.849837364228565 0.0 38 1.7572746778476197E-4 0.0 0.0 3.9980634833050117 0.0 39 1.7572746778476197E-4 0.0 0.0 4.181786550873981 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 18655 0.0 44.191906 1 GTTTTTA 12715 0.0 43.035786 2 TCACGAC 180 0.0 41.250004 25 TAGCCGT 105 0.0 40.714287 44 GTAGCCG 105 0.0 40.714287 43 CACGACC 490 0.0 40.408165 27 TTATTTT 14010 0.0 40.230194 6 TATTTTT 14000 0.0 40.194645 7 CACGACG 185 0.0 40.135136 26 CGGTCTA 185 0.0 40.135136 31 AGACTTA 890 0.0 39.69101 8 TTTATTT 14230 0.0 39.560787 5 TTTGCGA 195 0.0 39.23077 2 TTTTATT 14395 0.0 39.185482 4 CGCCGTT 75 0.0 39.000004 26 ACACGAC 495 0.0 38.636364 26 ACGACCA 510 0.0 38.382355 28 CGACGGT 195 0.0 38.076923 28 TTTTTAT 14845 0.0 37.861233 3 TAGAGGC 500 0.0 37.35 5 >>END_MODULE