SRR1546894_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1546894_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2836129
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36204	1.2765286769395892	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20177	0.711427442122696	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	29410	43.95954	1
GTTTTTA	20330	42.399162	2
AGCGATA	390	40.384617	8
CGTACGA	95	40.26316	2
TAATGCG	95	40.26316	1
CGTAAGA	325	39.46154	2
AGACTTA	1955	39.130436	8
TATACGA	190	39.07895	2
TATTTTT	23170	38.794777	7
GAGCGAT	2280	38.78289	7
TGTACGA	175	38.571426	2
TATGCGA	205	38.414635	2
TTATTTT	23650	38.0074	6
TCACGAC	430	37.67442	25
CGGTCTA	430	37.67442	31
GCGTAAG	215	37.67442	1
TTTATTT	23925	37.56113	5
TTTTATT	24040	37.50312	4
TCGTAAG	90	37.5	1
GCGCGAC	1060	37.146225	9