##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546894_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2836129 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.720391068248308 31.0 31.0 34.0 30.0 34.0 2 32.06795142251992 33.0 31.0 34.0 30.0 34.0 3 31.99087100763047 33.0 31.0 34.0 30.0 34.0 4 35.8064767152693 37.0 35.0 37.0 35.0 37.0 5 35.83382667008447 37.0 35.0 37.0 35.0 37.0 6 35.88760772165159 37.0 35.0 37.0 35.0 37.0 7 36.09554925040434 37.0 35.0 37.0 35.0 37.0 8 13.280738287997478 0.0 0.0 35.0 0.0 37.0 9 24.901417742281822 18.0 17.0 38.0 17.0 39.0 10 32.67169617460983 32.0 32.0 38.0 27.0 39.0 11 35.6021764172222 37.0 35.0 37.0 32.0 39.0 12 36.75761398723401 38.0 35.0 39.0 33.0 39.0 13 37.061767994333124 39.0 37.0 39.0 33.0 39.0 14 38.29441608615123 40.0 38.0 41.0 34.0 41.0 15 38.51889423929588 40.0 38.0 41.0 34.0 41.0 16 38.56148468564018 40.0 38.0 41.0 34.0 41.0 17 38.50764016728435 40.0 38.0 41.0 34.0 41.0 18 38.416281487901294 40.0 38.0 41.0 34.0 41.0 19 38.35522291122865 40.0 37.0 41.0 34.0 41.0 20 38.29071103606359 40.0 37.0 41.0 34.0 41.0 21 38.2325521864485 40.0 37.0 41.0 34.0 41.0 22 38.174661660312346 40.0 37.0 41.0 34.0 41.0 23 37.99249328926858 40.0 36.0 41.0 34.0 41.0 24 37.72889808608847 40.0 35.0 41.0 33.0 41.0 25 37.6097518836414 39.0 35.0 41.0 33.0 41.0 26 37.53443514029157 39.0 35.0 41.0 33.0 41.0 27 37.480308547319254 39.0 35.0 41.0 33.0 41.0 28 37.34126162808532 39.0 35.0 41.0 33.0 41.0 29 37.26979590843717 39.0 35.0 41.0 33.0 41.0 30 37.10676347937629 39.0 35.0 41.0 32.0 41.0 31 36.96217026799557 39.0 35.0 41.0 32.0 41.0 32 36.67272680473984 39.0 35.0 41.0 31.0 41.0 33 36.33576223084352 39.0 35.0 41.0 30.0 41.0 34 35.976171041585204 39.0 35.0 41.0 27.0 41.0 35 35.70228716676851 39.0 35.0 41.0 25.0 41.0 36 35.52904539955693 39.0 35.0 41.0 24.0 41.0 37 35.465449914302205 39.0 35.0 41.0 23.0 41.0 38 35.340821239090324 39.0 35.0 41.0 23.0 41.0 39 35.232686877077874 39.0 35.0 41.0 23.0 41.0 40 35.11179428016145 39.0 35.0 41.0 23.0 41.0 41 35.011516753998144 39.0 35.0 40.0 22.0 41.0 42 34.934274851390754 39.0 35.0 40.0 22.0 41.0 43 34.82081280505929 38.0 34.0 40.0 21.0 41.0 44 34.622618717272736 38.0 34.0 40.0 20.0 41.0 45 34.53988164854278 38.0 34.0 40.0 20.0 41.0 46 34.50255013082973 38.0 34.0 40.0 20.0 41.0 47 34.46997650671038 38.0 34.0 40.0 20.0 41.0 48 34.377304769987546 38.0 34.0 40.0 20.0 41.0 49 34.254097045656245 38.0 34.0 40.0 20.0 41.0 50 34.159724398995955 37.0 34.0 40.0 20.0 41.0 51 33.82324217269384 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 5.0 12 9.0 13 7.0 14 23.0 15 72.0 16 170.0 17 384.0 18 1027.0 19 2115.0 20 3987.0 21 6796.0 22 11358.0 23 18388.0 24 29326.0 25 45919.0 26 60087.0 27 63437.0 28 59534.0 29 57886.0 30 62172.0 31 73208.0 32 93404.0 33 125877.0 34 186112.0 35 273349.0 36 303775.0 37 493821.0 38 599516.0 39 264293.0 40 71.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.216049058417305 21.27628891351557 24.785332402016973 20.722329626050154 2 39.252234295407575 22.740820322347822 25.551447060412276 12.455498321832328 3 29.37733086188957 22.579896753638497 35.377551585276976 12.665220799194959 4 25.91553487165076 24.743232765505375 34.73925198748012 14.601980375363743 5 21.876261622796424 29.64177581485186 33.708234004870725 14.77372855748099 6 20.475620114599867 37.69049292186639 32.03905746177272 9.794829501761026 7 78.74194015857529 4.475854236531554 14.601416226130759 2.1807893787623907 8 29.533423902791444 63.73786241740061 5.44968159064697 1.2790320891609654 9 73.14635547254727 6.144325593088325 16.542900552125804 4.166418382238608 10 38.27992309235581 26.30031990787443 22.092824409609012 13.326932590160744 11 32.004327024617005 23.000787340773286 28.968781039226354 16.026104595383355 12 28.94804855491411 20.59359782294811 33.91834433483103 16.54000928730675 13 23.264245032577854 24.05895500522014 34.347802938441795 18.328997023760202 14 18.874247257441393 28.115399546353498 35.23746627886108 17.772886917344028 15 18.939688568467794 22.620303942451137 40.77593085504926 17.664076634031808 16 21.90369337925038 20.53876956936726 39.175651037029695 18.38188601435266 17 21.28164833122894 20.749232492598185 34.27368783295823 23.695431343214644 18 23.273306679632697 22.953081471258887 34.71305430747332 19.060557541635095 19 25.568865167980725 24.522086266174774 31.23359339437663 18.67545517146787 20 27.15609903498748 23.268969782404113 30.46525739837645 19.10967378423196 21 24.969245051970486 24.711252555860472 31.840688487723934 18.478813904445108 22 22.626333287378678 22.486635833560463 32.80802812566001 22.07900275340085 23 22.5768644515112 24.544616976167163 32.11997761737918 20.758540954942458 24 22.396019363012048 23.09337833363715 34.899646666283516 19.610955637067285 25 22.435756624610516 22.980583746366968 33.41470010708258 21.16895952193994 26 19.947364876562386 25.239437275243827 32.81010842595665 22.00308942223714 27 20.47297566507024 24.149500957114434 34.040799977716105 21.33672340009922 28 19.36787783630434 25.25061448192237 35.615622561597164 19.765885120176126 29 21.22361147888548 24.67081010772077 34.623848210007374 19.481730203386377 30 22.033306665528965 23.95155509499039 34.73565553611983 19.279482703360813 31 25.924208666107923 23.23036081927162 30.7145761000293 20.130854414591155 32 25.79568841896825 24.537847185371326 30.669973051296328 18.996491344364095 33 24.2528460447321 24.896787134858815 30.50541777189966 20.34494904850943 34 21.233554609116865 26.258890198577006 31.826267422955727 20.681287769350405 35 21.73120475126484 26.287344475515745 30.875182334795063 21.106268438424344 36 24.17696797289545 28.21874463397116 28.217157964253385 19.387129428879998 37 22.686309402710524 29.287490096536512 27.8895635565237 20.136636944229263 38 22.43208965459611 30.069365674128363 26.596956626444 20.901588044831527 39 22.72082828390387 27.133250991051533 27.79492752269026 22.350993202354335 40 23.254160865038227 25.363091735248993 29.197049922623407 22.18569747708937 41 20.488948140229166 25.76409606192102 29.677352475857056 24.06960332199276 42 21.92678823847575 26.899446393305805 27.444661367659933 23.729104000558507 43 21.72514014701024 25.82107513445263 28.649507832683206 23.804276885853923 44 21.588439735992264 26.905510997560405 29.466466440701396 22.03958282574594 45 21.845762304888105 27.630760095891265 28.30960791980901 22.213869679411623 46 22.066979322872832 27.651563098857636 28.9946613852896 21.28679619297994 47 21.924743197506178 26.661163861023248 29.714692103215334 21.699400838255244 48 21.770624678919752 25.6613503828634 30.85416777586633 21.713857162350514 49 21.746189965266037 25.32603418250721 31.098585431057614 21.829190421169137 50 20.28796997597782 26.540682740453626 31.194349763357028 21.976997520211526 51 20.805647415896807 26.78344320727301 30.20356267292496 22.207346703905216 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1784.0 1 3985.0 2 6186.0 3 50932.0 4 95678.0 5 64689.5 6 33701.0 7 32250.0 8 30799.0 9 30505.5 10 30212.0 11 29359.5 12 28507.0 13 27135.5 14 25764.0 15 24001.0 16 22238.0 17 20846.5 18 19455.0 19 18649.0 20 17843.0 21 17860.0 22 17877.0 23 18217.5 24 18558.0 25 20449.0 26 26599.5 27 30859.0 28 34799.0 29 38739.0 30 43017.5 31 47296.0 32 52470.5 33 57645.0 34 62702.5 35 67760.0 36 73858.0 37 79956.0 38 94191.0 39 108426.0 40 123950.0 41 139474.0 42 154135.0 43 168796.0 44 177980.5 45 187165.0 46 190357.0 47 193549.0 48 188954.5 49 184360.0 50 178211.0 51 172062.0 52 166528.0 53 160994.0 54 158259.0 55 155524.0 56 153600.5 57 151677.0 58 147757.0 59 143837.0 60 130911.0 61 117985.0 62 102833.0 63 87681.0 64 73637.0 65 59593.0 66 49843.5 67 40094.0 68 33816.0 69 27538.0 70 23657.0 71 19776.0 72 15950.5 73 12125.0 74 9271.5 75 4775.5 76 3133.0 77 2341.5 78 1550.0 79 1130.5 80 711.0 81 493.5 82 276.0 83 190.5 84 105.0 85 72.0 86 39.0 87 27.0 88 15.0 89 16.5 90 18.0 91 10.0 92 2.0 93 2.5 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 1.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2836129.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.24994143731997 #Duplication Level Percentage of deduplicated Percentage of total 1 72.83094925196669 19.846391019405146 2 6.394060170579816 3.4847553039000023 3 2.996963698198831 2.450012557970761 4 2.0124848801727504 2.1936038051279736 5 1.6236331021494428 2.2121953474633234 6 1.3175390424274964 2.1541717048519144 7 1.1606968543864795 2.2140244915959153 8 1.0200447483150152 2.223692772402396 9 0.8869087165767067 2.175138952826748 >10 9.428312826880928 50.697133652520506 >50 0.2783391908220161 4.775616878369032 >100 0.04419069560876359 2.260295207331784 >500 0.0041790733618032525 0.7970141812193247 >1k 0.0014365564681196557 0.5095040200266027 >5k 0.0 0.0 >10k+ 2.611920851126647E-4 2.0064501049884673 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36204 1.2765286769395892 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20177 0.711427442122696 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.006875568777019663 0.0 2 0.0 0.0 0.0 0.025880346063243246 0.0 3 0.0 0.0 0.0 0.049504095194541575 0.0 4 0.0 0.0 0.0 0.0762659244343258 0.0 5 0.0 0.0 0.0 0.14614991067049488 0.0 6 0.0 0.0 0.0 0.2875750715147301 0.0 7 0.0 0.0 0.0 0.38048339832214967 0.0 8 0.0 0.0 0.0 0.5630209345202563 0.0 9 0.0 0.0 0.0 0.88680733492729 0.0 10 0.0 0.0 0.0 1.313797785643742 0.0 11 0.0 0.0 0.0 1.5515514280203757 0.0 12 0.0 0.0 0.0 1.756302340267315 0.0 13 0.0 0.0 0.0 1.8605641703885825 0.0 14 0.0 0.0 0.0 1.9137704949245962 0.0 15 0.0 0.0 0.0 1.9643676292580485 0.0 16 0.0 0.0 0.0 2.036472953099101 0.0 17 0.0 0.0 0.0 2.118979778423337 0.0 18 0.0 0.0 0.0 2.263930871973736 0.0 19 0.0 0.0 0.0 2.3270450674140704 0.0 20 0.0 0.0 0.0 2.396400163744315 0.0 21 0.0 0.0 0.0 2.4789422483956125 0.0 22 0.0 0.0 0.0 2.5670200473955873 0.0 23 0.0 0.0 0.0 2.6701535790508824 0.0 24 0.0 0.0 0.0 2.752871960337488 0.0 25 0.0 0.0 0.0 2.8243778756184925 0.0 26 0.0 0.0 0.0 2.894826011087648 0.0 27 0.0 0.0 0.0 2.9706688235972343 0.0 28 0.0 0.0 0.0 3.049191344963505 0.0 29 0.0 0.0 0.0 3.1383621831023905 0.0 30 0.0 0.0 0.0 3.2488296547865065 0.0 31 0.0 0.0 0.0 3.341526425631556 0.0 32 0.0 0.0 0.0 3.4429675095878927 0.0 33 0.0 0.0 0.0 3.5468767464385436 0.0 34 0.0 0.0 0.0 3.647330569237154 0.0 35 0.0 0.0 0.0 3.7639684231570567 0.0 36 0.0 0.0 0.0 3.874435894841173 0.0 37 0.0 0.0 0.0 3.9889229298103155 0.0 38 0.0 0.0 0.0 4.148682940726603 0.0 39 0.0 0.0 0.0 4.322581941794608 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 29410 0.0 43.95954 1 GTTTTTA 20330 0.0 42.399162 2 AGCGATA 390 0.0 40.384617 8 CGTACGA 95 0.0 40.26316 2 TAATGCG 95 0.0 40.26316 1 CGTAAGA 325 0.0 39.46154 2 AGACTTA 1955 0.0 39.130436 8 TATACGA 190 0.0 39.07895 2 TATTTTT 23170 0.0 38.794777 7 GAGCGAT 2280 0.0 38.78289 7 TGTACGA 175 0.0 38.571426 2 TATGCGA 205 0.0 38.414635 2 TTATTTT 23650 0.0 38.0074 6 TCACGAC 430 0.0 37.67442 25 CGGTCTA 430 0.0 37.67442 31 GCGTAAG 215 0.0 37.67442 1 TTTATTT 23925 0.0 37.56113 5 TTTTATT 24040 0.0 37.50312 4 TCGTAAG 90 0.0 37.5 1 GCGCGAC 1060 0.0 37.146225 9 >>END_MODULE