##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546891_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1265650 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.754506380120887 31.0 31.0 34.0 30.0 34.0 2 32.10374669142338 33.0 31.0 34.0 30.0 34.0 3 31.938504325840476 33.0 31.0 34.0 30.0 34.0 4 35.811805791490535 37.0 35.0 37.0 35.0 37.0 5 35.872833721803026 37.0 35.0 37.0 35.0 37.0 6 35.93063959230435 37.0 35.0 37.0 35.0 37.0 7 36.13097459803263 37.0 35.0 37.0 35.0 37.0 8 13.128262157784537 0.0 0.0 36.0 0.0 37.0 9 24.8432591948801 18.0 17.0 39.0 17.0 39.0 10 32.73099593094457 32.0 32.0 38.0 27.0 39.0 11 35.69040809070438 37.0 35.0 37.0 32.0 39.0 12 36.881493303835974 39.0 37.0 39.0 33.0 39.0 13 37.193483190455495 39.0 37.0 39.0 34.0 39.0 14 38.43390036740015 40.0 38.0 41.0 34.0 41.0 15 38.642203610792876 40.0 38.0 41.0 35.0 41.0 16 38.67298305218662 40.0 38.0 41.0 34.0 41.0 17 38.636211432860584 40.0 38.0 41.0 34.0 41.0 18 38.497031564808594 40.0 38.0 41.0 34.0 41.0 19 38.38493501362936 40.0 37.0 41.0 34.0 41.0 20 38.29790305376684 40.0 37.0 41.0 34.0 41.0 21 38.25899103227591 40.0 37.0 41.0 34.0 41.0 22 38.204834669932445 40.0 37.0 41.0 34.0 41.0 23 37.955878007348005 39.0 36.0 41.0 34.0 41.0 24 37.52586655078418 39.0 35.0 41.0 33.0 41.0 25 37.41115316240667 39.0 35.0 41.0 33.0 41.0 26 37.33797969422826 39.0 35.0 41.0 33.0 41.0 27 37.28048433611188 39.0 35.0 41.0 33.0 41.0 28 37.10926006399873 39.0 35.0 41.0 33.0 41.0 29 36.9826839963655 39.0 35.0 41.0 33.0 41.0 30 36.74897088452574 39.0 35.0 41.0 32.0 41.0 31 36.49203571287481 39.0 35.0 41.0 31.0 41.0 32 36.03990755738158 39.0 35.0 41.0 30.0 41.0 33 35.522967645083554 39.0 35.0 41.0 24.0 41.0 34 34.975785564729584 39.0 35.0 41.0 21.0 41.0 35 34.53027614269348 39.0 34.0 41.0 18.0 41.0 36 34.32354126338245 39.0 34.0 41.0 16.0 41.0 37 34.228356180618654 38.0 34.0 41.0 15.0 41.0 38 34.09464701931814 38.0 34.0 40.0 15.0 41.0 39 33.95693517165093 38.0 34.0 40.0 15.0 41.0 40 33.8451167384348 38.0 33.0 40.0 14.0 41.0 41 33.72697981274444 38.0 33.0 40.0 12.0 41.0 42 33.64764429344606 38.0 33.0 40.0 12.0 41.0 43 33.5347513135543 38.0 33.0 40.0 11.0 41.0 44 33.33129696203532 38.0 33.0 40.0 10.0 41.0 45 33.255426065657964 37.0 33.0 40.0 10.0 41.0 46 33.21600600481966 37.0 33.0 40.0 10.0 41.0 47 33.191509501046895 37.0 33.0 40.0 11.0 41.0 48 33.10556868012484 37.0 33.0 40.0 11.0 41.0 49 33.00597084502034 37.0 32.0 40.0 10.0 41.0 50 32.92339983407735 36.0 32.0 40.0 10.0 41.0 51 32.58734879311026 36.0 32.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 5.0 13 4.0 14 12.0 15 30.0 16 66.0 17 165.0 18 491.0 19 1050.0 20 2097.0 21 3735.0 22 6564.0 23 10904.0 24 18211.0 25 28954.0 26 37802.0 27 39308.0 28 34123.0 29 29890.0 30 29491.0 31 33199.0 32 41134.0 33 55452.0 34 80400.0 35 119740.0 36 132378.0 37 212489.0 38 241624.0 39 106308.0 40 24.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.555840872279067 19.64697981274444 23.299016315727098 26.4981629992494 2 43.88480227551061 21.022083514399714 24.28491289060957 10.80820131948011 3 26.594793189270334 21.944692450519497 40.01611820013432 11.44439616007585 4 23.898234108955872 23.280132738118752 39.16043139888595 13.661201754039427 5 20.589736499032117 27.17749772843993 38.615256982578124 13.617508789949827 6 18.9358827479951 34.97483506498637 36.738592817919645 9.350689369098882 7 74.0133528226603 3.8532769723067197 20.15912772093391 1.9742424840990795 8 27.476395527989574 64.06320862797772 7.425670604037451 1.0347252399952593 9 69.46422786710386 4.971674633587485 21.810769169991705 3.7533283293169517 10 35.892861375577766 22.92885078813258 28.349148658791922 12.829139177497728 11 29.127641923122503 21.469679611266937 33.57033935132145 15.832339114289102 12 26.116619918618895 19.262671354639906 38.6587129143128 15.961995812428398 13 22.23900762454075 21.342472247461778 39.05819144313199 17.360328684865483 14 18.572986212618023 24.438114802670565 39.792991743372966 17.195907241338443 15 18.174850867143366 21.044917631256666 43.519061351874534 17.261170149725437 16 21.125350610358314 19.08300082961324 42.15027851301703 17.641370047011417 17 21.134673882985027 19.286848654841386 37.96484020068739 21.613637261486193 18 22.478489313791332 20.931221111681744 38.93430253229565 17.655987042231263 19 23.7131908505511 22.68020384782523 35.947457827993524 17.659147473630153 20 24.488523683482796 22.402480938648125 34.857108995377864 18.25188638249121 21 23.560067949275076 22.864377987595308 36.6817050527397 16.893849010389918 22 22.13716272271165 20.244380357918857 37.2581677398965 20.360289179473 23 20.900801959467465 22.904436455576185 36.727215264883654 19.46754632007269 24 21.158851183186506 22.11061509896101 38.708489708845256 18.022044009007228 25 21.682929719906767 21.469916643621854 37.07004306087781 19.777110575593568 26 19.482242326077507 22.848180776676017 36.74246434638328 20.927112550863193 27 19.01426144668747 21.844111721249952 38.655078418204084 20.48654841385849 28 18.743649508157866 22.713704420653418 39.5200094812942 19.02263658989452 29 20.1253901157508 23.225852328842887 38.165922648441516 18.4828349069648 30 21.14802670564532 21.846798087939003 38.71465255007308 18.290522656342592 31 24.63200726899222 21.11010152885869 35.36617548295342 18.89171571919567 32 24.545174416307827 22.39244656895666 34.57575159009205 18.486627424643466 33 24.024019278631535 22.660925216292025 33.59917828783629 19.715877217240152 34 21.561174100264687 23.98419784300557 35.02247856832458 19.432149488405166 35 22.01358985501521 24.922371903764866 33.48563978983131 19.578398451388615 36 24.448386204716943 26.52960929166831 30.533322798562 18.48868170505274 37 22.84502034527713 27.621775372338327 29.85620037135069 19.677003911033854 38 23.059613637261485 28.339825386165213 29.00161972109193 19.59894125548137 39 22.703037964682178 26.69268755185083 29.09177102674515 21.512503456721845 40 22.890372535851146 25.398727926361946 30.652787105439895 21.058112432347016 41 21.038833800813812 25.419428752024654 30.686524710622997 22.855212736538537 42 21.440050566902382 27.135543001619723 29.152135266463873 22.272271165014025 43 21.1909295618852 26.091731521352663 29.578872516098446 23.13846640066369 44 21.4402875992573 26.067080156441353 31.092719156164815 21.39991308813653 45 21.791095484533642 26.39039228854739 30.26444909730178 21.554063129617195 46 22.38170110220045 26.32505036937542 31.118476672065736 20.174771856358394 47 21.482795401572314 26.065657962311857 31.958203294749733 20.493343341366096 48 21.33014656500612 25.40173033619089 32.710623000039504 20.55750009876348 49 21.2836882234425 24.945917117686562 32.82558369217398 20.944810966696952 50 20.48330897167463 25.377632046774384 33.234148461264965 20.90491052028602 51 20.573144234187968 25.775293327539213 32.39884644253941 21.252715995733418 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 964.0 1 2222.0 2 3480.0 3 33008.5 4 62537.0 5 42541.0 6 22545.0 7 21975.5 8 21406.0 9 21085.0 10 20764.0 11 20031.5 12 19299.0 13 18402.5 14 17506.0 15 16265.0 16 15024.0 17 13914.0 18 12804.0 19 11847.5 20 10891.0 21 10417.0 22 9943.0 23 9929.5 24 9916.0 25 10250.0 26 11419.0 27 12254.0 28 13168.5 29 14083.0 30 15999.5 31 17916.0 32 20675.5 33 23435.0 34 25745.0 35 28055.0 36 30452.0 37 32849.0 38 37957.5 39 43066.0 40 47746.0 41 52426.0 42 56397.0 43 60368.0 44 63574.5 45 66781.0 46 70821.5 47 74862.0 48 77723.0 49 80584.0 50 80956.5 51 81329.0 52 77875.5 53 74422.0 54 70770.0 55 67118.0 56 65546.5 57 63975.0 58 61055.0 59 58135.0 60 54663.0 61 51191.0 62 46505.5 63 41820.0 64 35942.5 65 30065.0 66 24869.0 67 19673.0 68 16436.0 69 13199.0 70 11150.0 71 9101.0 72 7373.0 73 5645.0 74 4363.0 75 2203.0 76 1325.0 77 1009.0 78 693.0 79 519.5 80 346.0 81 229.0 82 112.0 83 73.0 84 34.0 85 31.0 86 28.0 87 16.5 88 5.0 89 5.0 90 5.0 91 4.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1265650.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.49048269838071 #Duplication Level Percentage of deduplicated Percentage of total 1 69.08147055882753 27.280606178820747 2 8.676306144720302 6.852630353878626 3 5.128626627537992 6.07595823303731 4 3.640848525676157 5.751154628425567 5 2.7307197550134688 5.391872061974289 6 2.1736655996083063 5.15034622520383 7 1.7161810304546503 4.7440972103320975 8 1.3877457249268474 4.384219883198037 9 1.0654368967346954 3.7867155603046134 >10 4.333087080014148 24.380690196033168 >50 0.039073657598171566 1.046611111493262 >100 0.024601867274155476 1.8678444922399773 >500 0.0018298895020310202 0.43646984710822306 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 4.0664211156244887E-4 2.850784017950232 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22820 1.8030261130644334 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12685 1.0022518073717064 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.90107849721487E-5 0.0 0.0 0.005688776517994707 0.0 2 7.90107849721487E-5 0.0 0.0 0.027653774740252043 0.0 3 7.90107849721487E-5 0.0 0.0 0.05625567890016987 0.0 4 7.90107849721487E-5 0.0 0.0 0.07664046142298424 0.0 5 7.90107849721487E-5 0.0 0.0 0.13534547465729072 0.0 6 7.90107849721487E-5 0.0 0.0 0.2488839726622684 0.0 7 7.90107849721487E-5 0.0 0.0 0.31675423695334415 0.0 8 7.90107849721487E-5 0.0 0.0 0.43345316635720776 0.0 9 7.90107849721487E-5 0.0 0.0 0.7164697981274444 0.0 10 7.90107849721487E-5 0.0 0.0 1.1072571405996918 0.0 11 7.90107849721487E-5 0.0 0.0 1.3554300161972108 0.0 12 7.90107849721487E-5 0.0 0.0 1.5638604669537393 0.0 13 7.90107849721487E-5 0.0 0.0 1.6797692885078814 0.0 14 7.90107849721487E-5 0.0 0.0 1.7511160273377315 0.0 15 7.90107849721487E-5 0.0 0.0 1.8024730375696283 0.0 16 7.90107849721487E-5 0.0 0.0 1.864022439062932 0.0 17 7.90107849721487E-5 0.0 0.0 1.9172757081341603 0.0 18 7.90107849721487E-5 0.0 0.0 2.0146960060048196 0.0 19 7.90107849721487E-5 0.0 0.0 2.0692134476356023 0.0 20 7.90107849721487E-5 0.0 0.0 2.1284715363647138 0.0 21 7.90107849721487E-5 0.0 0.0 2.182593924070636 0.0 22 7.90107849721487E-5 0.0 0.0 2.244380357918856 0.0 23 7.90107849721487E-5 0.0 0.0 2.317307312448149 0.0 24 7.90107849721487E-5 0.0 0.0 2.3769604551021213 0.0 25 7.90107849721487E-5 0.0 0.0 2.429344605538656 0.0 26 7.90107849721487E-5 0.0 0.0 2.487259510923241 0.0 27 7.90107849721487E-5 0.0 0.0 2.549520009481294 0.0 28 7.90107849721487E-5 0.0 0.0 2.612570615889069 0.0 29 7.90107849721487E-5 0.0 0.0 2.679097696835618 0.0 30 7.90107849721487E-5 0.0 0.0 2.769328013273812 0.0 31 7.90107849721487E-5 0.0 0.0 2.834748943230751 0.0 32 7.90107849721487E-5 0.0 0.0 2.9162090625370363 0.0 33 7.90107849721487E-5 0.0 0.0 2.991664362185438 0.0 34 7.90107849721487E-5 0.0 0.0 3.068620866748311 0.0 35 7.90107849721487E-5 0.0 0.0 3.1537944929482875 0.0 36 7.90107849721487E-5 0.0 0.0 3.2347015367597676 0.0 37 7.90107849721487E-5 0.0 0.0 3.3216134002291313 0.0 38 7.90107849721487E-5 0.0 0.0 3.4402085884723266 0.0 39 7.90107849721487E-5 0.0 0.0 3.585114368111247 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 19990 0.0 44.167084 1 GTTTTTA 13285 0.0 43.069252 2 CGTTAGA 75 0.0 42.000004 2 AGCGATA 180 0.0 41.25 8 ATTGCGA 110 0.0 40.909092 2 TTATTTT 14935 0.0 40.028458 6 TATTTTT 15020 0.0 39.786953 7 TAAGCGA 85 0.0 39.705883 2 TATGCGA 80 0.0 39.375 2 TTTATTT 15215 0.0 39.232666 5 CACGACG 195 0.0 39.23077 26 TTTTATT 15365 0.0 38.952164 4 TCTAGCG 35 6.2487907E-6 38.571426 1 TATTACG 70 0.0 38.571426 1 TCACGAC 205 0.0 38.414635 25 CGGTCTA 205 0.0 38.414635 31 ACCCGCT 435 0.0 38.27586 34 CGACGGT 200 0.0 38.250004 28 GCGCGAC 465 0.0 38.225803 9 TTTTTAT 15780 0.0 37.742397 3 >>END_MODULE