##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546882_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1257591 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.75380946587563 31.0 31.0 34.0 30.0 34.0 2 32.09138265143437 33.0 31.0 34.0 30.0 34.0 3 32.11391939032642 33.0 31.0 34.0 30.0 34.0 4 35.83573514759568 37.0 35.0 37.0 35.0 37.0 5 35.79764406710926 37.0 35.0 37.0 35.0 37.0 6 35.844311862918865 37.0 35.0 37.0 35.0 37.0 7 36.078270280242144 37.0 35.0 37.0 35.0 37.0 8 13.284755536577473 0.0 0.0 36.0 0.0 37.0 9 24.97634286504913 18.0 17.0 39.0 17.0 39.0 10 32.76302549875118 32.0 32.0 38.0 27.0 39.0 11 35.65917933572998 37.0 35.0 37.0 32.0 39.0 12 36.41872118995762 37.0 35.0 39.0 33.0 39.0 13 36.374204331933036 38.0 35.0 39.0 32.0 39.0 14 37.475914665419836 39.0 36.0 41.0 33.0 41.0 15 37.910655372056574 40.0 36.0 41.0 33.0 41.0 16 38.10143520429138 40.0 36.0 41.0 34.0 41.0 17 38.115211543339605 40.0 36.0 41.0 34.0 41.0 18 38.0707861299898 40.0 36.0 41.0 34.0 41.0 19 38.0259456373336 40.0 36.0 41.0 34.0 41.0 20 37.990689341765325 40.0 36.0 41.0 34.0 41.0 21 37.88293014183466 40.0 35.0 41.0 33.0 41.0 22 37.821817268094314 40.0 35.0 41.0 33.0 41.0 23 37.763569395773345 40.0 35.0 41.0 33.0 41.0 24 37.71128689693231 40.0 35.0 41.0 33.0 41.0 25 37.60032156718679 40.0 35.0 41.0 33.0 41.0 26 37.51730968176458 40.0 35.0 41.0 33.0 41.0 27 37.420309941785526 39.0 35.0 41.0 33.0 41.0 28 37.4090519095636 39.0 35.0 41.0 33.0 41.0 29 37.478957785162265 40.0 35.0 41.0 33.0 41.0 30 37.43461825028964 40.0 35.0 41.0 33.0 41.0 31 37.31347393548459 40.0 35.0 41.0 33.0 41.0 32 37.14029919107246 39.0 35.0 41.0 32.0 41.0 33 37.035717494797595 40.0 35.0 41.0 32.0 41.0 34 36.938005281526344 40.0 35.0 41.0 32.0 41.0 35 36.845230285522085 40.0 35.0 41.0 32.0 41.0 36 36.73002192286681 39.0 35.0 41.0 31.0 41.0 37 36.614958281349026 39.0 35.0 41.0 31.0 41.0 38 36.556056778396155 39.0 35.0 41.0 31.0 41.0 39 36.54067816961158 39.0 35.0 41.0 31.0 41.0 40 36.395115741127285 39.0 35.0 41.0 30.0 41.0 41 36.38751311038327 39.0 35.0 41.0 31.0 41.0 42 36.34575549602375 39.0 35.0 41.0 30.0 41.0 43 36.2226979995881 39.0 35.0 41.0 30.0 41.0 44 36.04354038793217 38.0 35.0 40.0 30.0 41.0 45 35.94290830643667 38.0 35.0 40.0 30.0 41.0 46 35.96286471515779 38.0 35.0 40.0 30.0 41.0 47 35.933971378611965 38.0 35.0 40.0 30.0 41.0 48 35.90757169858881 38.0 35.0 40.0 30.0 41.0 49 35.85329093481108 38.0 35.0 40.0 29.0 41.0 50 35.70267916993681 38.0 35.0 40.0 29.0 41.0 51 35.25917806345624 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 0.0 13 2.0 14 8.0 15 20.0 16 46.0 17 128.0 18 337.0 19 669.0 20 1263.0 21 2117.0 22 3356.0 23 5099.0 24 7657.0 25 10853.0 26 13763.0 27 15534.0 28 16869.0 29 19725.0 30 24432.0 31 32305.0 32 43355.0 33 61246.0 34 101306.0 35 166943.0 36 120995.0 37 207531.0 38 306070.0 39 95927.0 40 32.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.52432627141893 22.699351378945938 30.467059640216892 14.309262709418244 2 29.518897638421393 25.73014596955608 31.394944779343998 13.356011612678525 3 28.23891074284088 24.556711999370222 32.812575789744045 14.391801468044857 4 25.63067006681823 26.827879652446622 31.636994857628594 15.904455423106558 5 23.395603181002407 31.70935542636676 30.251011656412935 14.644029736217895 6 21.058992947627647 40.63356051371233 26.945962558574287 11.361483980085735 7 85.91529360499558 5.428951065966598 6.829247346712881 1.826507982324937 8 33.110208326872566 63.60812060518881 2.2097009282032074 1.0719701397354147 9 84.74074639529067 4.418845236646891 7.634835172961639 3.205573195100792 10 60.820171263948296 18.10874918793153 11.094306495514042 9.976773052606132 11 55.54110994751076 16.608977004447393 17.015150394683168 10.834762653358682 12 47.61174340465223 19.980661439211953 20.533702928853657 11.87389222728216 13 21.784188977179387 45.64409255473361 21.232817346816255 11.338901121270748 14 13.541843095251158 48.5068674950759 26.671549017128783 11.279740392544158 15 11.126351890240944 21.62594993125746 55.261289242687006 11.986408935814586 16 13.17447405396508 15.29098093100221 52.64787995461163 18.886665060421077 17 14.439750284472455 15.09353995058807 29.476594536697544 40.99011522824193 18 20.907910441471035 20.63954020027179 36.3349451451227 22.117604213134477 19 30.39271114376614 21.87563365195839 25.98237423772912 21.74928096654636 20 32.1808918797924 21.929307700198237 23.723372702253755 22.166427717755614 21 21.909189871746857 28.52437716236837 27.828920531396932 21.737512434487844 22 22.199824903327077 24.252559059344414 24.665252852477476 28.882363184851034 23 17.3014915024042 31.877216042417604 24.529596665370537 26.291695789807655 24 18.637935545022188 23.405383785348334 40.781064749986285 17.175615919643192 25 15.673299188686943 23.672720304137037 39.134901569747235 21.51907893742878 26 14.345840579329847 36.046059489929554 27.707338872495114 21.90076105824549 27 17.064291967738317 34.32864898047139 29.443117834017578 19.16394121777271 28 13.365633182807446 27.80776898053501 41.747674720954585 17.07892311570296 29 13.613885595555312 24.426303941424518 41.109390890997155 20.850419572023018 30 17.853419752526854 29.726198740289966 33.13676704111273 19.283614466070446 31 31.205455509780204 25.36874071140776 23.51289091604504 19.912912862766987 32 32.15846805519442 26.881633217794977 24.823650932616406 16.136247794394205 33 28.570656119517395 25.77761768333266 25.728237558951996 19.923488638197952 34 19.28687466751909 26.841159009566702 29.77239818033049 24.09956814258372 35 19.348898012151807 25.09416813574525 32.3797641681596 23.17716968394335 36 30.778925739767537 22.786899715408268 28.010299055893373 18.423875488930822 37 20.75786165772497 31.748000741099453 28.71354836349815 18.780589237677432 38 20.185736062042427 35.076984488597645 22.206027237790344 22.53125221156958 39 19.86035205404619 31.676832928988834 26.447946908016995 22.01486810894798 40 23.908727082175364 24.61603176231382 24.249378375004273 27.22586278050654 41 16.950184917035823 22.10058755191473 26.4869102911837 34.46231723986574 42 22.505091082871935 24.423043739975874 23.7998681606341 29.271997016518085 43 22.323871592592504 25.91033173742496 24.722584687708483 27.043211982274045 44 19.733204197549124 31.111545804637597 27.64420228834335 21.51104770946993 45 16.563731769708912 38.87329028277079 21.747452073050777 22.81552587446952 46 23.17009266128654 32.508899952369255 25.30242344291586 19.01858394342835 47 22.940844837471005 26.90827144914364 26.090358471076847 24.060525242308508 48 23.90562591494373 22.480917881886878 30.144776799452288 23.468679403717108 49 20.96381096874898 21.448070159535174 33.383429111690525 24.204689760025317 50 19.098260086148837 33.3462151049109 26.15246133281806 21.403063476122206 51 18.102546853468258 34.77450140785041 23.39130925714322 23.731642481538113 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1002.0 1 1440.5 2 1879.0 3 5256.5 4 8634.0 5 6268.0 6 3902.0 7 4274.0 8 4646.0 9 5143.0 10 5640.0 11 5537.5 12 5435.0 13 5180.0 14 4925.0 15 4728.0 16 4531.0 17 4451.0 18 4371.0 19 4077.0 20 3783.0 21 3759.5 22 3736.0 23 3896.5 24 4057.0 25 4669.5 26 6886.0 27 8490.0 28 9544.5 29 10599.0 30 12386.0 31 14173.0 32 15021.5 33 15870.0 34 18083.0 35 20296.0 36 28037.0 37 35778.0 38 55504.0 39 75230.0 40 104013.0 41 132796.0 42 142753.5 43 152711.0 44 146041.0 45 139371.0 46 131526.5 47 123682.0 48 113468.5 49 103255.0 50 94621.0 51 85987.0 52 77032.5 53 68078.0 54 60098.0 55 52118.0 56 47779.5 57 43441.0 58 40042.0 59 36643.0 60 31772.5 61 26902.0 62 23230.5 63 19559.0 64 16233.0 65 12907.0 66 10031.5 67 7156.0 68 5704.0 69 4252.0 70 3603.5 71 2955.0 72 2351.5 73 1748.0 74 1351.0 75 695.5 76 437.0 77 326.0 78 215.0 79 157.0 80 99.0 81 68.0 82 37.0 83 25.5 84 14.0 85 7.5 86 1.0 87 1.5 88 2.0 89 1.0 90 0.0 91 1.0 92 2.0 93 3.0 94 4.0 95 4.0 96 4.0 97 3.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1257591.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.663229595785417 #Duplication Level Percentage of deduplicated Percentage of total 1 79.54534234941877 16.436636722413933 2 6.369503784299457 2.632290382124075 3 2.0138713223735953 1.2483925653172074 4 1.100093736327579 0.9092595780248874 5 0.7558032053870822 0.7808667581071921 6 0.5462362801347889 0.6772203401983742 7 0.4252531206281909 0.6150972007505178 8 0.3503396126875867 0.5791318282769713 9 0.3246141415942064 0.6036818884019894 >10 6.020325116194121 33.22238905975941 >50 2.167062224633487 30.74509907829922 >100 0.37844987656474 10.450242550983075 >500 0.0019407685977678973 0.27149424405634726 >1k 7.763074391071589E-4 0.4172269003193851 >5k 3.8815371955357945E-4 0.41097090296742195 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5124 0.4074456639718319 No Hit CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3402 0.2705172031288392 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1800 0.1431307953062641 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.951710850348006E-5 0.0 0.0 0.01200708338402549 0.0 2 7.951710850348006E-5 0.0 0.0 0.05176563763576552 0.0 3 7.951710850348006E-5 0.0 0.0 0.07744966368238959 0.0 4 7.951710850348006E-5 0.0 0.0 0.13358874228584652 0.0 5 7.951710850348006E-5 0.0 0.0 0.25922577372134503 0.0 6 7.951710850348006E-5 0.0 0.0 0.39750602540889685 0.0 7 7.951710850348006E-5 0.0 0.0 0.4998445440528757 0.0 8 7.951710850348006E-5 0.0 0.0 0.7775182869470281 0.0 9 1.5903421700696013E-4 0.0 0.0 1.1056853937408904 0.0 10 1.5903421700696013E-4 0.0 0.0 1.7025408101680117 0.0 11 1.5903421700696013E-4 0.0 0.0 2.008204575255389 0.0 12 1.5903421700696013E-4 0.0 0.0 2.404040741385713 0.0 13 1.5903421700696013E-4 0.0 0.0 2.58494216323113 0.0 14 1.5903421700696013E-4 0.0 0.0 2.6691507811363153 0.0 15 1.5903421700696013E-4 0.0 0.0 2.74763416722925 0.0 16 1.5903421700696013E-4 0.0 0.0 2.902294943268519 0.0 17 1.5903421700696013E-4 0.0 0.0 3.060374954973437 0.0 18 1.5903421700696013E-4 0.0 0.0 3.387110753814237 0.0 19 1.5903421700696013E-4 0.0 0.0 3.4888926526986914 0.0 20 1.5903421700696013E-4 0.0 0.0 3.605226182439283 0.0 21 1.5903421700696013E-4 0.0 0.0 3.7423931946077857 0.0 22 1.5903421700696013E-4 0.0 0.0 3.8704157392983887 0.0 23 1.5903421700696013E-4 0.0 0.0 4.021816313889015 0.0 24 1.5903421700696013E-4 0.0 0.0 4.137275155436068 0.0 25 1.5903421700696013E-4 0.0 0.0 4.225221077440917 0.0 26 1.5903421700696013E-4 0.0 0.0 4.316109132460395 0.0 27 1.5903421700696013E-4 0.0 0.0 4.406122499286334 0.0 28 1.5903421700696013E-4 0.0 0.0 4.49422745550819 7.951710850348006E-5 29 1.5903421700696013E-4 0.0 0.0 4.594578046439581 7.951710850348006E-5 30 1.5903421700696013E-4 0.0 0.0 4.740730491868978 7.951710850348006E-5 31 1.5903421700696013E-4 0.0 0.0 4.882270945005173 7.951710850348006E-5 32 1.5903421700696013E-4 0.0 0.0 4.998763508962771 7.951710850348006E-5 33 1.5903421700696013E-4 0.0 0.0 5.1091332555656015 7.951710850348006E-5 34 1.5903421700696013E-4 0.0 0.0 5.236758214713687 7.951710850348006E-5 35 1.5903421700696013E-4 0.0 0.0 5.405254967632561 7.951710850348006E-5 36 1.5903421700696013E-4 0.0 0.0 5.53661723088031 7.951710850348006E-5 37 1.5903421700696013E-4 0.0 0.0 5.661777159664788 7.951710850348006E-5 38 1.5903421700696013E-4 0.0 0.0 5.777713103862862 7.951710850348006E-5 39 1.5903421700696013E-4 0.0 0.0 5.91408494494633 7.951710850348006E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 75 0.0 45.000004 1 CCGTAGG 30 2.1656651E-6 45.000004 1 CTACGCG 35 1.2120472E-7 45.000004 1 TACGACA 30 2.1656651E-6 45.000004 23 GTCACGA 70 0.0 45.000004 2 GTTCACG 55 1.8189894E-12 45.000004 1 CGTGTAA 30 2.1656651E-6 45.000004 26 GCGTGAT 30 2.1656651E-6 45.000004 16 GCTACGA 60 0.0 45.000004 2 CGCGTCA 30 2.1656651E-6 45.000004 39 ATTGCGA 125 0.0 45.000004 2 TATCGTA 30 2.1656651E-6 45.000004 26 TAGTCTA 30 2.1656651E-6 45.000004 2 GTACCGA 20 7.0335396E-4 45.0 2 CCTAGGT 20 7.0335396E-4 45.0 39 AAGACGC 20 7.0335396E-4 45.0 38 ATTCGAA 20 7.0335396E-4 45.0 3 TAACGGC 20 7.0335396E-4 45.0 17 TATGCGT 20 7.0335396E-4 45.0 20 GTAGCGC 20 7.0335396E-4 45.0 34 >>END_MODULE