##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546867_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1212239 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.639108294651468 31.0 31.0 34.0 30.0 34.0 2 31.976262106729777 31.0 31.0 34.0 30.0 34.0 3 31.806948134815 31.0 31.0 34.0 30.0 34.0 4 35.69116898565382 37.0 35.0 37.0 33.0 37.0 5 35.74180174041587 37.0 35.0 37.0 35.0 37.0 6 35.79863294284378 37.0 35.0 37.0 35.0 37.0 7 36.00722629778451 37.0 35.0 37.0 35.0 37.0 8 13.257109365397417 0.0 0.0 35.0 0.0 37.0 9 24.86306248190332 18.0 17.0 38.0 17.0 39.0 10 32.59690127111898 32.0 32.0 37.0 27.0 39.0 11 35.54277910544043 37.0 35.0 37.0 32.0 39.0 12 36.69763140766796 38.0 35.0 39.0 33.0 39.0 13 37.0000709431061 39.0 37.0 39.0 33.0 39.0 14 38.231229155306835 40.0 37.0 41.0 33.0 41.0 15 38.44122817365223 40.0 38.0 41.0 34.0 41.0 16 38.478767800738964 40.0 38.0 41.0 34.0 41.0 17 38.385062681533924 40.0 38.0 41.0 33.0 41.0 18 38.265462503681206 40.0 37.0 41.0 33.0 41.0 19 38.172541883242495 40.0 37.0 41.0 34.0 41.0 20 38.03316425226379 40.0 36.0 41.0 33.0 41.0 21 38.01316242094175 40.0 36.0 41.0 33.0 41.0 22 37.959091400293175 40.0 36.0 41.0 33.0 41.0 23 37.70362032569485 39.0 36.0 41.0 33.0 41.0 24 37.292231152437765 39.0 35.0 41.0 33.0 41.0 25 37.171476911731105 39.0 35.0 41.0 33.0 41.0 26 37.091101672195 39.0 35.0 41.0 33.0 41.0 27 37.032492767515315 39.0 35.0 41.0 33.0 41.0 28 36.838218371129784 39.0 35.0 41.0 32.0 41.0 29 36.686436420540836 38.0 35.0 41.0 32.0 41.0 30 36.47330518156898 38.0 35.0 41.0 31.0 41.0 31 36.2302879217712 38.0 35.0 41.0 30.0 41.0 32 35.790030678768794 38.0 35.0 41.0 27.0 41.0 33 35.2594711108948 38.0 35.0 41.0 23.0 41.0 34 34.680936679978124 38.0 34.0 41.0 20.0 41.0 35 34.263542915217215 38.0 34.0 40.0 17.0 41.0 36 34.0094593557871 38.0 33.0 40.0 15.0 41.0 37 33.90574630910241 38.0 33.0 40.0 15.0 41.0 38 33.74410161692538 38.0 33.0 40.0 14.0 41.0 39 33.6031764363298 38.0 33.0 40.0 12.0 41.0 40 33.450563791463566 38.0 33.0 40.0 12.0 41.0 41 33.32031554833659 38.0 33.0 40.0 11.0 41.0 42 33.21555815313647 37.0 33.0 40.0 10.0 41.0 43 33.09778929732503 37.0 33.0 40.0 10.0 41.0 44 32.88529077186924 37.0 32.0 40.0 10.0 41.0 45 32.812789392190815 37.0 32.0 40.0 10.0 41.0 46 32.782994112547115 37.0 32.0 40.0 10.0 41.0 47 32.736859645663934 36.0 32.0 40.0 10.0 41.0 48 32.64640223586273 36.0 32.0 40.0 10.0 41.0 49 32.53134489156016 36.0 31.0 40.0 10.0 41.0 50 32.42559346795475 35.0 31.0 40.0 10.0 41.0 51 32.08735488628893 35.0 31.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 5.0 13 9.0 14 12.0 15 47.0 16 86.0 17 302.0 18 621.0 19 1405.0 20 2691.0 21 4738.0 22 7493.0 23 11772.0 24 18613.0 25 29045.0 26 37475.0 27 39286.0 28 34879.0 29 31510.0 30 31156.0 31 35678.0 32 43339.0 33 56698.0 34 81304.0 35 117059.0 36 127728.0 37 196990.0 38 211554.0 39 90729.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.195828545361103 19.111000388537246 23.096105635934826 26.597065430166822 2 43.55123040918499 21.375570328953284 23.565237548041267 11.50796171382046 3 26.62470024475372 22.03294894818596 39.44766667299105 11.894684134069273 4 23.427228459074488 23.17257570495587 39.60819607354655 13.791999762423087 5 21.173794936477048 26.776155527086654 38.106841967631794 13.943207568804503 6 18.555664353316466 34.70825472534707 36.85428368498292 9.881797236353556 7 72.62074557904835 4.104141180080826 21.146902549744727 2.12821069112609 8 27.196452184758947 63.810106752876294 7.6713420373375225 1.322099025027243 9 67.82763134992356 5.080351316860784 22.37454825327349 4.717469079942157 10 36.42202568965361 21.8231718332771 28.108483558110244 13.64631891895905 11 30.290644006668654 21.36138170773255 33.24022738090426 15.107746904694535 12 26.552189790957065 18.44034055990609 37.94639505906014 17.061074590076707 13 23.572991794522366 20.346647814498624 38.555020915842505 17.525339475136505 14 18.545517839303965 24.573454574551718 39.81632334877858 17.06470423736573 15 18.10030860251155 19.867369388379686 44.118692766030456 17.913629243078304 16 21.764355048798134 18.076220943229842 41.80165792389124 18.35776608408078 17 20.488946486625164 18.391670289439624 39.22840297994043 21.89098024399479 18 22.09968496311371 20.142892614410197 38.62258185060867 19.13484057186743 19 25.2762037848972 22.43913947662136 34.452364591470825 17.832292147010616 20 25.574824766403324 23.045455557856165 33.77749767166376 17.602222004076754 21 23.635025766371154 23.148240569722635 36.645991425783194 16.57074223812301 22 21.404854983217007 19.687206895669913 37.46975637642412 21.43818174468896 23 21.103594258227957 22.602061144708262 36.22066275709658 20.0736818399672 24 22.06602823370639 22.029154316929255 37.70230127887322 18.20251617049113 25 22.683975684662844 21.19648023203345 35.986055555051436 20.133488528252265 26 19.005163173268638 22.503895683936914 36.63551494383533 21.855426198959115 27 20.602042996471816 20.220435079221176 37.577078447401874 21.60044347690513 28 19.89805640636871 22.59694664171009 38.238334189875104 19.2666627620461 29 21.16835046554351 22.585562747939967 37.745692062373834 18.500394724142684 30 22.261121775491468 20.729823079442255 38.20698723601534 18.802067909050937 31 24.655204130538618 20.28923339374496 35.108258354994355 19.947304120722066 32 25.56220349287558 21.24308820290388 34.53980609434279 18.654902209877754 33 25.245929226827386 21.13980823913436 32.7790146992466 20.835247834791655 34 21.52232356820726 24.81367123149808 34.2547962901705 19.40920891012416 35 22.41678414900032 24.487910387308112 33.44167280544513 19.653632658246433 36 24.00417739406173 27.17137462167114 29.568014228217372 19.256433756049756 37 23.21448163274734 27.350629702558653 29.332829582285342 20.102059082408665 38 24.053590092382773 28.28254164401574 27.406064315700124 20.257803947901362 39 23.716940306325732 25.490187990981976 27.706830088786123 23.08604161390617 40 23.701184337412013 23.63337592669432 30.93911349164645 21.726326244247215 41 21.725418832424957 24.200095855685223 30.383694964441833 23.690790347447987 42 22.725139184599737 26.522657660741817 28.42929488326972 22.322908271388727 43 22.062233602449684 24.631611423159956 29.54186426933963 23.764290705050737 44 22.334044689207328 24.82653998097735 30.969718017651637 21.86969731216369 45 21.932226235915525 25.329246130507265 30.805888937742477 21.932638695834733 46 23.288311958285455 25.354736153514285 30.61096037992508 20.745991508275182 47 21.541214232506956 25.955772747783236 31.1035200154425 21.399493004267313 48 21.916470267001802 25.0146217041359 31.667022757063584 21.40188527179871 49 22.915448191322007 23.81370340337178 31.84240071471055 21.428447690595668 50 21.3405937278045 23.81287848353336 32.20041592458253 22.646111864079607 51 21.202832114789246 25.600397281394184 31.74110055855322 21.45567004526335 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 954.0 1 2207.0 2 3460.0 3 32248.0 4 61036.0 5 41271.0 6 21506.0 7 20884.5 8 20263.0 9 20017.5 10 19772.0 11 19293.0 12 18814.0 13 17825.0 14 16836.0 15 15615.0 16 14394.0 17 13345.0 18 12296.0 19 11370.0 20 10444.0 21 10040.5 22 9637.0 23 9430.0 24 9223.0 25 9311.0 26 9952.0 27 10505.0 28 11415.0 29 12325.0 30 13360.0 31 14395.0 32 15622.0 33 16849.0 34 18477.0 35 20105.0 36 22915.5 37 25726.0 38 30371.5 39 35017.0 40 39666.5 41 44316.0 42 48451.0 43 52586.0 44 59060.5 45 65535.0 46 71792.0 47 78049.0 48 76806.5 49 75564.0 50 74282.5 51 73001.0 52 70181.0 53 67361.0 54 66691.0 55 66021.0 56 65678.0 57 65335.0 58 62913.5 59 60492.0 60 56273.5 61 52055.0 62 47449.5 63 42844.0 64 36821.5 65 30799.0 66 26510.5 67 22222.0 68 20184.0 69 18146.0 70 16308.5 71 14471.0 72 12054.0 73 9637.0 74 7539.5 75 4093.0 76 2744.0 77 2095.0 78 1446.0 79 1095.5 80 745.0 81 509.0 82 273.0 83 197.0 84 121.0 85 80.5 86 40.0 87 30.0 88 20.0 89 12.0 90 4.0 91 4.5 92 5.0 93 4.0 94 3.0 95 2.5 96 2.0 97 2.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1212239.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.56125875126314 #Duplication Level Percentage of deduplicated Percentage of total 1 69.01524773506185 29.37375816634495 2 9.643829028161429 8.209070052410421 3 5.65136621474041 7.215877792911394 4 4.0146508177263724 6.834743689968892 5 2.9097989951332335 6.192235397301552 6 2.1111737895556177 5.391252835569683 7 1.5849778167219422 4.72210556807603 8 1.1991294206114829 4.082916603751806 9 0.8937904287653727 3.4236761137276908 >10 2.9035656268375134 17.378476756880268 >50 0.04361384438734639 1.2701964481102423 >100 0.026108066767717594 2.1476915023477137 >500 0.0017667099833830408 0.45667458716825415 >1k 5.889033277943469E-4 0.30361424254837827 >5k 0.0 0.0 >10k+ 3.9260221852956465E-4 2.997710242882722 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22937 1.892118633371802 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12943 1.0676937468601488 No Hit GAATCTGACTCTTATACACATCTGACGCCTTGAAGGTCGTATGCCGTCTTC 1560 0.12868749479269354 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.003712139272866159 0.0 2 0.0 0.0 0.0 0.026892386732319286 0.0 3 0.0 0.0 0.0 0.05048509411097977 0.0 4 0.0 0.0 0.0 0.10212507599574011 0.0 5 0.0 0.0 0.0 0.24648604771831298 0.0 6 0.0 0.0 0.0 0.398601265921984 0.0 7 0.0 0.0 0.0 0.5206894020073599 0.0 8 0.0 0.0 0.0 0.7464699617814639 0.0 9 0.0 0.0 0.0 1.1219734722278363 0.0 10 0.0 0.0 0.0 1.7232575424483125 0.0 11 0.0 0.0 0.0 1.9655364989907105 0.0 12 0.0 0.0 0.0 2.200638652938901 0.0 13 0.0 0.0 0.0 2.308290691852019 0.0 14 0.0 0.0 0.0 2.3638077969773286 0.0 15 0.0 0.0 0.0 2.409755831977028 0.0 16 0.0 0.0 0.0 2.464200541312398 0.0 17 0.0 0.0 0.0 2.519140202550817 0.0 18 0.0 0.0 0.0 2.6204403587081426 0.0 19 0.0 0.0 0.0 2.6735651963020493 0.0 20 0.0 0.0 0.0 2.7337843445063226 0.0 21 0.0 0.0 0.0 2.7897139095508394 0.0 22 0.0 0.0 0.0 2.8504280096581613 0.0 23 0.0 0.0 0.0 2.9180714364081672 0.0 24 0.0 0.0 0.0 2.976475760967928 0.0 25 0.0 0.0 0.0 3.0276207909496393 0.0 26 0.0 0.0 0.0 3.081735532349644 0.0 27 0.0 0.0 0.0 3.1487190232289177 0.0 28 0.0 0.0 0.0 3.213475230544472 0.0 29 0.0 0.0 0.0 3.283675908793563 0.0 30 0.0 0.0 0.0 3.36823019223107 0.0 31 0.0 8.24919838414702E-5 0.0 3.4385133624640027 0.0 32 0.0 8.24919838414702E-5 0.0 3.5143234956143137 0.0 33 0.0 8.24919838414702E-5 0.0 3.5907935646353564 0.0 34 0.0 8.24919838414702E-5 0.0 3.6678410775432897 0.0 35 0.0 8.24919838414702E-5 0.0 3.748600729724089 0.0 36 8.24919838414702E-5 8.24919838414702E-5 0.0 3.8355472806929987 0.0 37 8.24919838414702E-5 8.24919838414702E-5 0.0 3.9316504418683116 0.0 38 8.24919838414702E-5 8.24919838414702E-5 0.0 4.057450717226554 0.0 39 8.24919838414702E-5 8.24919838414702E-5 0.0 4.2363758301787025 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTACGA 40 6.8157533E-9 45.000004 2 TTGTCGA 20 7.033439E-4 45.000004 2 GATTACG 55 1.8189894E-12 45.0 1 GTTAACG 25 3.8909337E-5 44.999996 1 CGTTTTT 19740 0.0 43.780396 1 GTTTTTA 13140 0.0 43.33904 2 TAACGCC 175 0.0 42.428574 12 AGCGATA 215 0.0 41.860462 8 TATACGA 60 3.6379788E-12 41.249996 2 TAGCCGT 160 0.0 40.781254 44 TATTTTT 14395 0.0 40.748524 7 TTATTTT 14525 0.0 40.35284 6 GAGCGAT 1040 0.0 40.024036 7 TTTTATT 14710 0.0 39.92182 4 CAACCCG 210 0.0 39.642853 23 TTTATTT 14795 0.0 39.631634 5 GTAGCAT 1055 0.0 39.454975 29 CGCATCG 155 0.0 39.19355 21 ATCGCCA 155 0.0 39.19355 24 ATAACGC 190 0.0 39.07895 11 >>END_MODULE