##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546865_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1143893 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.700689662407235 31.0 31.0 34.0 30.0 34.0 2 32.05309762364137 33.0 31.0 34.0 30.0 34.0 3 31.940129015563517 31.0 31.0 34.0 30.0 34.0 4 35.79293605258534 37.0 35.0 37.0 35.0 37.0 5 35.83366276391236 37.0 35.0 37.0 35.0 37.0 6 35.8868556761865 37.0 35.0 37.0 35.0 37.0 7 36.0716386934792 37.0 35.0 37.0 35.0 37.0 8 13.34620283540506 0.0 0.0 35.0 0.0 37.0 9 24.93839895864386 18.0 17.0 39.0 17.0 39.0 10 32.70941075782438 32.0 32.0 38.0 27.0 39.0 11 35.63522462328207 37.0 35.0 37.0 32.0 39.0 12 36.76905881931265 38.0 35.0 39.0 33.0 39.0 13 37.06084572595514 39.0 37.0 39.0 33.0 39.0 14 38.29050968928038 40.0 38.0 41.0 34.0 41.0 15 38.50353048755434 40.0 38.0 41.0 34.0 41.0 16 38.53826013447062 40.0 38.0 41.0 34.0 41.0 17 38.4649228555468 40.0 38.0 41.0 34.0 41.0 18 38.365113695074626 40.0 38.0 41.0 34.0 41.0 19 38.273579784123164 40.0 37.0 41.0 34.0 41.0 20 38.18386509927065 40.0 36.0 41.0 34.0 41.0 21 38.13166703529089 40.0 36.0 41.0 33.0 41.0 22 38.08695481133288 40.0 36.0 41.0 33.0 41.0 23 37.86584584397317 39.0 36.0 41.0 33.0 41.0 24 37.520087980256896 39.0 35.0 41.0 33.0 41.0 25 37.38777228289709 39.0 35.0 41.0 33.0 41.0 26 37.32084032335192 39.0 35.0 41.0 33.0 41.0 27 37.275368412954705 39.0 35.0 41.0 33.0 41.0 28 37.10842709938779 39.0 35.0 41.0 33.0 41.0 29 36.97622155219063 39.0 35.0 41.0 33.0 41.0 30 36.78607964206442 39.0 35.0 41.0 32.0 41.0 31 36.57478540387956 39.0 35.0 41.0 31.0 41.0 32 36.193028543753655 39.0 35.0 41.0 30.0 41.0 33 35.7422424999541 39.0 35.0 41.0 26.0 41.0 34 35.25487261483373 39.0 35.0 41.0 23.0 41.0 35 34.903046001680224 39.0 35.0 41.0 21.0 41.0 36 34.70176318938922 39.0 34.0 41.0 18.0 41.0 37 34.628477488716165 39.0 34.0 41.0 18.0 41.0 38 34.49199619195152 38.0 34.0 40.0 18.0 41.0 39 34.37279535760775 38.0 34.0 40.0 18.0 41.0 40 34.24373433529185 38.0 34.0 40.0 18.0 41.0 41 34.128010224732556 38.0 34.0 40.0 17.0 41.0 42 34.034938582542246 38.0 34.0 40.0 15.0 41.0 43 33.89951420281442 38.0 33.0 40.0 15.0 41.0 44 33.6452072003238 38.0 33.0 40.0 15.0 41.0 45 33.57967222458744 37.0 33.0 40.0 15.0 41.0 46 33.558665889204676 37.0 33.0 40.0 15.0 41.0 47 33.52571612904354 37.0 33.0 40.0 15.0 41.0 48 33.43956209190895 37.0 33.0 40.0 15.0 41.0 49 33.32460990669582 37.0 33.0 40.0 15.0 41.0 50 33.218204849579465 36.0 33.0 40.0 15.0 41.0 51 32.880429375824484 36.0 32.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 3.0 13 6.0 14 13.0 15 29.0 16 54.0 17 159.0 18 471.0 19 989.0 20 1868.0 21 3385.0 22 5656.0 23 9096.0 24 14723.0 25 23435.0 26 30476.0 27 31900.0 28 29440.0 29 26706.0 30 27367.0 31 31524.0 32 38835.0 33 52047.0 34 76727.0 35 111490.0 36 118629.0 37 189448.0 38 223398.0 39 95988.0 40 29.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.235794781504914 20.09479907648705 23.970423807121822 23.698982334886217 2 42.086279048827116 20.956592968048586 24.77417031138402 12.182957671740276 3 27.539901022210994 22.01499615785742 37.800213831188756 12.644888988742828 4 24.48052396509114 23.86796667170793 37.110988527773145 14.54052083542779 5 21.242371445581014 27.938015181489877 36.41686766157324 14.40274571135587 6 19.413266800303873 35.595287321454016 35.05782446435112 9.933621413890984 7 75.62333190254684 4.227580726519001 17.9001882169049 2.248899154029267 8 28.564647217877898 63.49745998970183 6.701850610153222 1.2360421822670478 9 70.76929398116782 5.524467760533546 19.66302792306623 4.043210335232404 10 38.182155149126714 22.451050928714487 25.692350595728797 13.674443326430008 11 32.437824167120525 21.387664755357363 31.07187472954201 15.1026363479801 12 29.321273930341384 19.194190365707282 35.29796930307293 16.186566400878405 13 23.69067736230574 22.233722909397994 35.760949669243544 18.314650059052724 14 19.05116999579506 25.570486050705792 38.02951849517394 17.34882545832521 15 19.467729936279003 20.3079308991313 42.6913181565059 17.5330210080838 16 22.858606530505913 18.677708491965596 40.430529778571945 18.033155198956546 17 21.30688796941672 18.824925058550058 37.478680261178276 22.38950671085495 18 23.65990525337597 20.750891910344762 37.19482504045396 18.39437779582531 19 26.05164993578945 23.46749215180091 32.654889924145 17.825967988264637 20 26.854609653175604 23.147969259362544 32.205459776395166 17.791961311066682 21 24.312676098201493 24.214415159459847 34.442557127283756 17.030351615054904 22 22.147963139909066 20.998817197063012 35.58820623956961 21.265013423458313 23 22.22043495326923 23.14858120471058 34.37323246142777 20.257751380592413 24 23.049183796036868 21.933257743512723 36.40899979281279 18.60855866763762 25 23.28513243808643 21.136417479606923 34.468433673429246 21.110016408877406 26 19.220853698728817 23.4603236491525 35.024691994793216 22.294130657325468 27 20.04121014815197 21.695648106947065 36.1012787035151 22.161863041385864 28 19.32077563198656 24.08852925929261 37.0406148127491 19.55008029597174 29 21.717940401768345 23.71908911060737 35.992265010800836 18.57070547682344 30 22.65273063127408 21.805710848829392 36.64888236924258 18.89267615065395 31 25.635789361417544 21.87302483711326 33.13544186388063 19.355743937588567 32 26.629413765098658 22.69679069633261 32.367712714388496 18.306082824180233 33 25.699081994557183 22.901093021812354 31.596311892808153 19.803513090822307 34 21.491870306051354 25.058025532108335 34.648520447279594 18.801583714560717 35 21.08475180807995 25.823132058680315 33.188331426103666 19.90378470713607 36 23.37578777035964 28.454497055231563 29.075971266543288 19.09374390786551 37 23.115448735152675 28.913718328549958 28.362530411498277 19.608302524799086 38 23.416438425621976 29.14800597608343 26.774269971054988 20.66128562723961 39 23.48908508051015 26.231998971931812 27.24878987807426 23.03012606948377 40 23.3316402845371 24.21799941078405 29.583885905412483 22.866474399266366 41 20.84285855407805 25.363386260777887 29.256844827269685 24.53691035787438 42 21.9519657870098 27.118270677414756 27.273092850467656 23.656670685107787 43 21.40934510483061 25.42991346218571 28.60494819008421 24.55579324289947 44 22.08265982919731 25.330690895040007 29.93697837122878 22.649670904533902 45 22.039124288722807 26.557204214030506 29.491045054039144 21.91262644320754 46 22.646698598557734 26.87279317208865 29.627421445886988 20.853086783466633 47 21.278301379587077 26.34346044603822 30.444193643985933 21.934044530388768 48 21.819698171070197 25.155674525501947 31.495253489618346 21.529373813809507 49 23.159771062503225 24.343797890187282 31.162530061815225 21.33390098549427 50 20.99409647580674 24.680105569314613 31.184997198164517 23.140800756714132 51 20.675098107952405 26.233222862627887 31.198285154293277 21.89339387512643 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 747.0 1 1968.0 2 3189.0 3 25914.0 4 48639.0 5 33135.5 6 17632.0 7 17083.5 8 16535.0 9 16215.5 10 15896.0 11 15458.5 12 15021.0 13 14133.0 14 13245.0 15 12421.0 16 11597.0 17 10809.5 18 10022.0 19 9284.0 20 8546.0 21 8352.0 22 8158.0 23 7998.5 24 7839.0 25 8452.5 26 9749.5 27 10433.0 28 11399.5 29 12366.0 30 13654.5 31 14943.0 32 16894.5 33 18846.0 34 20615.0 35 22384.0 36 24640.0 37 26896.0 38 31913.5 39 36931.0 40 42887.5 41 48844.0 42 54158.0 43 59472.0 44 62738.0 45 66004.0 46 68943.5 47 71883.0 48 71082.0 49 70281.0 50 68357.0 51 66433.0 52 64684.0 53 62935.0 54 62750.5 55 62566.0 56 62857.0 57 63148.0 58 62744.5 59 62341.0 60 57397.5 61 52454.0 62 46132.0 63 39810.0 64 33893.0 65 27976.0 66 23459.0 67 18942.0 68 16628.5 69 14315.0 70 12916.0 71 11517.0 72 9571.0 73 7625.0 74 5947.5 75 3192.0 76 2114.0 77 1592.5 78 1071.0 79 800.5 80 530.0 81 388.5 82 247.0 83 182.0 84 117.0 85 79.5 86 42.0 87 27.5 88 13.0 89 9.5 90 6.0 91 4.0 92 2.0 93 2.5 94 3.0 95 1.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1143893.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.43920153618898 #Duplication Level Percentage of deduplicated Percentage of total 1 68.25961742384732 28.286240432099657 2 9.493776530652418 7.8682903798649315 3 5.689968473137232 7.073632508786858 4 3.9291272647348774 6.512795863387341 5 2.9419321833384635 6.095566032558152 6 2.23930552361769 5.567701973657678 7 1.6874369544365382 4.8948228024156055 8 1.2786271612303917 4.238823089909712 9 0.9841526953495976 3.6704251696478014 >10 3.431556889842132 20.19014738853074 >50 0.038622472572236624 1.0965835034930056 >100 0.02460381651187137 1.8948038973692263 >500 8.484071528526883E-4 0.20988917050108685 >1k 0.0 0.0 >5k 2.1210178821317208E-4 0.855992726763017 >10k+ 2.1210178821317208E-4 1.5442850610151155 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17570 1.5359828235682884 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9739 0.8513908206449379 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.004633300492266322 0.0 2 0.0 0.0 0.0 0.01870804349707534 0.0 3 0.0 0.0 0.0 0.0403009722063165 0.0 4 0.0 0.0 0.0 0.06110711403951244 0.0 5 0.0 0.0 0.0 0.11382183473454248 0.0 6 0.0 0.0 0.0 0.23105307926528093 0.0 7 0.0 0.0 0.0 0.318823526326326 0.0 8 0.0 0.0 0.0 0.5144711961695718 0.0 9 0.0 0.0 0.0 0.8520901867569781 0.0 10 0.0 0.0 0.0 1.3330792303126253 0.0 11 0.0 0.0 0.0 1.5747976427865193 0.0 12 8.742076400502495E-5 0.0 0.0 1.7723685694378757 0.0 13 8.742076400502495E-5 0.0 0.0 1.8790219015240062 0.0 14 8.742076400502495E-5 0.0 0.0 1.9417900100796142 0.0 15 8.742076400502495E-5 0.0 0.0 1.9887349603503124 0.0 16 8.742076400502495E-5 0.0 0.0 2.0421490471573827 0.0 17 8.742076400502495E-5 0.0 0.0 2.10211969126483 0.0 18 8.742076400502495E-5 0.0 0.0 2.2134063238432264 0.0 19 8.742076400502495E-5 0.0 0.0 2.25956448723788 0.0 20 0.005944611952341697 0.0 0.0 2.3188357652332865 0.0 21 0.005944611952341697 0.0 0.0 2.3815164530248896 0.0 22 0.005944611952341697 0.0 0.0 2.45250211339697 0.0 23 0.005944611952341697 0.0 0.0 2.533716003157638 0.0 24 0.005944611952341697 0.0 0.0 2.5939489095571 0.0 25 0.005944611952341697 0.0 0.0 2.6440410073319796 0.0 26 0.005944611952341697 0.0 0.0 2.7040990722034315 0.0 27 0.007867868760452245 0.0 0.0 2.7710633774312807 0.0 28 0.012238906960703493 0.0 0.0 2.8368037919630593 0.0 29 0.012238906960703493 0.0 0.0 2.905691353999019 0.0 30 0.012238906960703493 0.0 0.0 3.0049139211447224 0.0 31 0.052015354582989844 0.0 0.0 3.081057406593099 0.0 32 0.052015354582989844 0.0 0.0 3.182290651310918 0.0 33 0.052015354582989844 0.0 0.0 3.27731702178438 0.0 34 0.052015354582989844 0.0 0.0 3.3729553376058776 0.0 35 0.052015354582989844 0.0 0.0 3.4700798064154603 0.0 36 0.052015354582989844 0.0 0.0 3.5797928652417665 0.0 37 0.052015354582989844 0.0 0.0 3.6951882737283994 0.0 38 0.052015354582989844 0.0 0.0 3.8881258998874895 0.0 39 0.052015354582989844 0.0 0.0 4.112884684144409 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGCG 40 6.8157533E-9 45.000004 1 CGTTTTT 15990 0.0 44.099438 1 GTTTTTA 10965 0.0 42.722298 2 CACGATA 75 0.0 42.0 23 ATAACGC 120 0.0 41.250004 11 AGCGATA 165 0.0 40.90909 8 CGGTCTA 165 0.0 40.90909 31 AGTACCT 505 0.0 40.544556 8 TATTTTT 12060 0.0 40.485077 7 CATATGC 785 0.0 40.414013 33 TTATTTT 12145 0.0 40.14615 6 ACGGGTA 45 1.9283107E-8 40.0 5 CGATAGT 45 1.9283107E-8 40.0 10 AACACGT 175 0.0 39.857143 41 TAACGCC 125 0.0 39.600002 12 TTTATTT 12405 0.0 39.41354 5 TCACGAC 160 0.0 39.375004 25 TACGCGA 40 3.458208E-7 39.375004 2 CACGACC 195 0.0 39.23077 27 AGACTTA 735 0.0 39.183674 8 >>END_MODULE