##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546845_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1381180 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.905360633661072 31.0 31.0 34.0 30.0 34.0 2 32.29939834054939 33.0 31.0 34.0 31.0 34.0 3 32.33678376460708 34.0 31.0 34.0 30.0 34.0 4 35.97073154838616 37.0 35.0 37.0 35.0 37.0 5 35.92795290983072 37.0 35.0 37.0 35.0 37.0 6 35.97742654831376 37.0 35.0 37.0 35.0 37.0 7 36.20809307983029 37.0 35.0 37.0 35.0 37.0 8 36.08079323477027 37.0 35.0 37.0 35.0 37.0 9 37.88759973356116 39.0 38.0 39.0 35.0 39.0 10 37.6175009774251 39.0 37.0 39.0 35.0 39.0 11 37.3911742133538 39.0 37.0 39.0 35.0 39.0 12 36.72601833215077 39.0 35.0 39.0 33.0 39.0 13 36.55103317453192 39.0 35.0 39.0 33.0 39.0 14 37.648804645303294 40.0 35.0 41.0 33.0 41.0 15 37.77726509216757 40.0 35.0 41.0 33.0 41.0 16 37.84732257924384 40.0 35.0 41.0 33.0 41.0 17 37.76684356854284 40.0 35.0 41.0 33.0 41.0 18 37.61641060542435 39.0 35.0 41.0 33.0 41.0 19 37.54736964045237 39.0 35.0 41.0 33.0 41.0 20 37.40162180164786 39.0 35.0 41.0 33.0 41.0 21 37.25896769429039 39.0 35.0 41.0 33.0 41.0 22 37.23019229933825 39.0 35.0 41.0 33.0 41.0 23 37.15612519729507 39.0 35.0 41.0 33.0 41.0 24 37.140309735154 39.0 35.0 41.0 33.0 41.0 25 37.02368264817041 38.0 35.0 41.0 33.0 41.0 26 36.972039125964756 38.0 35.0 41.0 33.0 41.0 27 36.913556524131536 38.0 35.0 41.0 33.0 41.0 28 36.843178296818664 38.0 35.0 41.0 33.0 41.0 29 36.72712970069071 38.0 35.0 41.0 32.0 41.0 30 36.65617008644782 38.0 35.0 41.0 32.0 41.0 31 36.44501078787703 38.0 35.0 41.0 31.0 41.0 32 36.21827567731939 38.0 35.0 41.0 31.0 41.0 33 36.03880088040661 38.0 35.0 41.0 30.0 41.0 34 35.80506885416818 38.0 35.0 41.0 30.0 41.0 35 35.655766808091634 38.0 35.0 41.0 29.0 41.0 36 35.565043658321144 38.0 35.0 41.0 28.0 41.0 37 35.306315614184975 38.0 35.0 41.0 27.0 41.0 38 35.39836371798028 38.0 35.0 41.0 27.0 41.0 39 35.309991456580605 38.0 35.0 40.0 27.0 41.0 40 35.202247353712046 37.0 35.0 40.0 27.0 41.0 41 35.13750778319987 37.0 35.0 40.0 26.0 41.0 42 35.128577013857715 37.0 35.0 40.0 27.0 41.0 43 35.01653079251075 37.0 35.0 40.0 26.0 41.0 44 34.887730780926454 37.0 34.0 40.0 26.0 41.0 45 34.83856267828958 37.0 34.0 40.0 25.0 41.0 46 34.669767879639146 36.0 34.0 40.0 24.0 41.0 47 34.64265989950622 36.0 34.0 40.0 24.0 41.0 48 34.51635051188114 36.0 34.0 40.0 24.0 41.0 49 34.49026629403843 36.0 34.0 40.0 24.0 41.0 50 34.37412936764216 35.0 34.0 40.0 24.0 41.0 51 33.84606713100393 35.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 3.0 12 0.0 13 10.0 14 15.0 15 35.0 16 79.0 17 202.0 18 534.0 19 1102.0 20 1968.0 21 3090.0 22 4708.0 23 6966.0 24 10379.0 25 15633.0 26 21623.0 27 24513.0 28 24357.0 29 24721.0 30 27090.0 31 31527.0 32 38871.0 33 51448.0 34 101985.0 35 202738.0 36 87830.0 37 112425.0 38 181255.0 39 405901.0 40 167.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.868561664663545 23.032262268495053 27.916057284351066 16.183118782490336 2 34.35627506914378 24.587381803964725 27.74641972805862 13.309923398832883 3 28.65535266945655 24.18381384033942 33.300511157126515 13.860322333077512 4 25.761884765200772 26.165090719529676 32.65772745044092 15.415297064828625 5 22.869068477678507 30.57595679057038 31.46164873513952 15.093325996611592 6 21.091385626782895 38.59221824816461 29.767445227993456 10.548950897059036 7 82.85545692813392 4.949608305941297 9.898058182134118 2.296876583790672 8 83.47586846030207 4.063337146497922 9.832606901345226 2.6281874918547907 9 78.46971430226328 6.045048436843858 11.735834576231918 3.749402684660942 10 46.37302885938111 24.409635239432948 17.53725075659943 11.680085144586513 11 40.30510143500485 21.50110774844698 23.50482920401396 14.688961612534209 12 35.89771065320957 20.61367815925513 28.03696838934824 15.451642798187057 13 24.453800373593594 29.818416136926395 28.854168175038737 16.873615314441277 14 18.634138924687583 32.74185841092399 31.063004097945235 17.560998566443185 15 17.610014625175573 23.037402800503916 42.53160341157561 16.820979162744898 16 20.977280296558014 20.096366874701342 40.82987011106445 18.096482717676192 17 21.339506798534586 20.842757642016245 30.109182003793855 27.708553555655307 18 24.20691003344966 23.59272506117957 32.47491275575957 19.725452149611204 19 27.922645853545518 26.18384280108313 26.92407941035926 18.96943193501209 20 29.367569759191415 24.856065103751863 26.191444996307506 19.584920140749215 21 25.53866983304131 26.733517716734966 28.79248179093239 18.93533065929133 22 23.68214135739006 24.259690988864595 29.00469164048133 23.05347601326402 23 21.736920604121114 28.296746260443967 28.6583935475463 21.307939587888615 24 23.166495315599704 23.942715648937867 33.69437727160833 19.196411763854098 25 21.910757468251784 24.736167624784606 31.67255535122142 21.68051955574219 26 19.708944525695422 28.687716300554598 28.887979843322377 22.715359330427606 27 20.1083131814825 27.5688179672454 30.736182105156463 21.586686746115642 28 18.305941296572495 27.23721745174416 34.77483021763999 19.682011034043352 29 20.068854168175037 26.044034810813944 33.48513589828987 20.401975122721154 30 21.990037504163105 25.973298194297627 31.975412328588597 20.061251972950668 31 28.47369640452367 24.480227052230703 26.663143109515055 20.382933433730578 32 28.834619673033203 25.714389145513255 26.469974948956686 18.98101623249685 33 27.15149365035694 25.63597793191329 26.70144369307404 20.511084724655728 34 22.041008413096048 26.1024631112527 29.82819038792916 22.028338087722094 35 21.11636426823441 27.298107415398427 30.350931811928934 21.234596504438233 36 26.27912364789528 27.985128658103942 26.470988574986603 19.264759119014176 37 22.40859265265932 30.64727262196093 27.048538206461142 19.895596518918605 38 22.332208691119188 32.16973891889543 24.662028120882145 20.83602426910323 39 22.361386640408927 29.432803834402467 26.5299960902996 21.675813434889008 40 23.1969040964972 26.403292836560045 27.0372435164135 23.36255955052926 41 19.30450773975876 26.064234929552992 27.597199496083057 27.03405783460519 42 22.059543289071666 27.378545881058226 25.087099436713533 25.47481139315658 43 21.354421581546216 26.937401352466733 26.569020692451385 25.13915637353567 44 21.42957471147859 28.231874194529315 27.635572481501324 22.702978612490767 45 20.8615097235697 30.7821572857991 25.275271868981598 23.081061121649604 46 23.054706844871774 29.373072300496677 26.52782403452121 21.04439682011034 47 22.130497111165816 27.067073082436753 28.177283192632384 22.62514661376504 48 23.052317583515546 24.588033420698245 29.467484324997468 22.892164670788745 49 21.876076977656787 24.152898246426968 30.061107169232105 23.90991760668414 50 20.061613982247064 27.92908961902142 29.085998928452483 22.923297470279035 51 19.433600254854543 29.204882781389824 27.713114872789934 23.648402090965696 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1202.0 1 1851.0 2 2500.0 3 13763.5 4 25027.0 5 16545.0 6 8063.0 7 8191.0 8 8319.0 9 8798.0 10 9277.0 11 9604.0 12 9931.0 13 9679.0 14 9427.0 15 9126.5 16 8826.0 17 8248.0 18 7670.0 19 7574.5 20 7479.0 21 7078.5 22 6678.0 23 6696.0 24 6714.0 25 7515.0 26 8896.0 27 9476.0 28 11874.5 29 14273.0 30 15881.0 31 17489.0 32 20209.0 33 22929.0 34 25165.0 35 27401.0 36 30692.0 37 33983.0 38 40417.0 39 46851.0 40 61411.5 41 75972.0 42 87455.0 43 98938.0 44 101876.0 45 104814.0 46 106114.5 47 107415.0 48 104607.0 49 101799.0 50 99719.5 51 97640.0 52 92447.0 53 87254.0 54 80652.5 55 74051.0 56 71355.5 57 68660.0 58 68255.5 59 67851.0 60 65564.5 61 63278.0 62 57150.5 63 51023.0 64 42702.0 65 34381.0 66 28038.5 67 21696.0 68 17807.0 69 13918.0 70 11308.0 71 8698.0 72 7305.0 73 5912.0 74 4503.5 75 2248.0 76 1401.0 77 1069.0 78 737.0 79 590.5 80 444.0 81 310.5 82 177.0 83 155.5 84 134.0 85 80.0 86 26.0 87 20.5 88 15.0 89 13.5 90 12.0 91 8.5 92 5.0 93 4.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1381180.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.33653051716595 #Duplication Level Percentage of deduplicated Percentage of total 1 79.5041189026779 20.14358534818089 2 6.137325811465271 3.1099708543196023 3 2.3282655169723125 1.7697051096850245 4 1.279191571361532 1.296411051404117 5 0.9341777868715628 1.183441200276495 6 0.6839484981261719 1.039732919696614 7 0.5419823905116682 0.9612367363875804 8 0.4782040739812644 0.9692825691087512 9 0.39501113724450937 0.9007390560074346 >10 6.165726235750643 38.54626685065893 >50 1.4300750088918315 24.047305732872445 >100 0.11878612142448086 4.268166612971685 >500 0.0020280557314600635 0.33737197956753284 >1k 8.691667420543131E-4 0.288483872867799 >5k 0.0 0.0 >10k+ 2.8972224735143763E-4 1.138300105995155 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15507 1.122735631851026 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1711 0.12387958122764592 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.172055778392389E-4 0.0 0.0 0.018896885272013785 0.0 2 2.172055778392389E-4 0.0 0.0 0.060455552498588166 0.0 3 2.172055778392389E-4 0.0 0.0 0.11048523726089286 0.0 4 2.172055778392389E-4 0.0 0.0 0.18245268538496068 0.0 5 2.172055778392389E-4 0.0 0.0 0.36222650197657075 0.0 6 2.172055778392389E-4 0.0 0.0 0.7052665112440087 0.0 7 2.172055778392389E-4 0.0 0.0 0.9532428792771398 0.0 8 2.172055778392389E-4 0.0 0.0 1.5703239259184176 0.0 9 2.172055778392389E-4 0.0 0.0 1.9427590900534326 0.0 10 2.172055778392389E-4 0.0 0.0 2.4098958861263555 0.0 11 2.172055778392389E-4 0.0 0.0 2.731432543187709 0.0 12 2.172055778392389E-4 0.0 0.0 2.9955545258402236 0.0 13 2.172055778392389E-4 0.0 0.0 3.1196513126457086 0.0 14 2.172055778392389E-4 0.0 0.0 3.1705498197193704 0.0 15 2.172055778392389E-4 0.0 0.0 3.226661260661174 0.0 16 2.172055778392389E-4 0.0 0.0 3.3325851807874427 0.0 17 2.172055778392389E-4 0.0 0.0 3.4373506711652357 0.0 18 2.172055778392389E-4 0.0 0.0 3.613287189215019 0.0 19 2.172055778392389E-4 0.0 0.0 3.700314224069274 0.0 20 2.896074371189852E-4 0.0 0.0 3.8064553497733824 0.0 21 2.896074371189852E-4 0.0 0.0 3.93265179049798 0.0 22 2.896074371189852E-4 0.0 0.0 4.061671903734488 0.0 23 2.896074371189852E-4 0.0 0.0 4.2106025282729265 0.0 24 2.896074371189852E-4 0.0 0.0 4.323477026890051 0.0 25 2.896074371189852E-4 0.0 0.0 4.4194818922949946 0.0 26 2.896074371189852E-4 0.0 0.0 4.515197150262819 7.24018592797463E-5 27 2.896074371189852E-4 0.0 0.0 4.60902995988937 1.448037185594926E-4 28 2.896074371189852E-4 0.0 0.0 4.712564618659407 1.448037185594926E-4 29 2.896074371189852E-4 0.0 0.0 4.820950202001187 1.448037185594926E-4 30 2.896074371189852E-4 0.0 0.0 4.978858657090314 1.448037185594926E-4 31 2.896074371189852E-4 0.0 0.0 5.104548284799954 1.448037185594926E-4 32 3.620092963987315E-4 0.0 0.0 5.227052230701284 1.448037185594926E-4 33 3.620092963987315E-4 0.0 0.0 5.3590408201682616 1.448037185594926E-4 34 3.620092963987315E-4 0.0 0.0 5.493273867272912 1.448037185594926E-4 35 3.620092963987315E-4 0.0 0.0 5.648286247990848 1.448037185594926E-4 36 3.620092963987315E-4 0.0 0.0 5.785560173185248 1.448037185594926E-4 37 3.620092963987315E-4 0.0 0.0 5.9292778638555435 1.448037185594926E-4 38 3.620092963987315E-4 0.0 0.0 6.121287594665431 1.448037185594926E-4 39 3.620092963987315E-4 0.0 0.0 6.357752067073083 1.448037185594926E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTAC 20 7.033781E-4 45.0 28 TACGACG 20 7.033781E-4 45.0 1 GTCGTTT 20 7.033781E-4 45.0 9 CGTTTTT 8270 0.0 43.612453 1 GTATGCG 70 0.0 41.785717 1 CGACGGT 195 0.0 40.384617 28 ATAACGG 45 1.9288564E-8 40.0 2 ATGGGAC 625 0.0 39.600002 5 CGTAAGG 200 0.0 39.375004 2 CGTATGG 135 0.0 38.333336 2 ATAACGC 100 0.0 38.250004 11 GTTTTTT 10045 0.0 37.89945 2 CTCACGA 215 0.0 37.67442 24 TATGCGG 275 0.0 37.636364 2 CGTGGTA 30 1.14004084E-4 37.500004 20 TTAGCCG 30 1.14004084E-4 37.500004 1 GGGACCG 600 0.0 37.500004 7 TACGACT 30 1.14004084E-4 37.500004 13 AATGTCG 30 1.14004084E-4 37.500004 15 TACCGTT 30 1.14004084E-4 37.500004 34 >>END_MODULE