SRR1546837_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1546837_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2369456
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	54203	2.287571493203503	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	32200	43.9309	1
AGGGCGA	1730	38.887283	6
GTTTTTT	37280	38.855953	2
GGGCGAT	3245	38.27427	7
TACGGGT	380	37.894737	4
TAGTACG	95	37.894737	1
ATTAGCG	115	37.173916	1
GTACGAG	295	36.61017	1
TATACGG	150	36.0	2
GGCGATA	610	35.77869	8
TAGGGAC	1485	35.757576	5
CGAATAT	145	35.689655	14
TGGGCGA	1035	35.652172	6
CTATGCG	95	35.526314	1
TAGGGTA	1620	35.416664	5
GTAGGGT	1505	35.28239	4
TATGGGC	805	35.217392	4
TAGGGTC	1210	35.14463	5
TCGTTAG	90	35.0	1
TAGGGCG	770	34.772728	5