##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546826_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4298882 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95707767740543 33.0 31.0 34.0 30.0 34.0 2 32.35664737948146 34.0 31.0 34.0 31.0 34.0 3 32.383019817710746 34.0 31.0 34.0 30.0 34.0 4 36.00495942898642 37.0 35.0 37.0 35.0 37.0 5 35.96790863298876 37.0 35.0 37.0 35.0 37.0 6 36.02312461705159 37.0 35.0 37.0 35.0 37.0 7 36.24909104274088 37.0 36.0 37.0 35.0 37.0 8 36.1351130363662 37.0 36.0 37.0 35.0 37.0 9 37.946576807644405 39.0 39.0 39.0 35.0 39.0 10 37.6809821716437 39.0 38.0 39.0 35.0 39.0 11 37.4654442713245 39.0 37.0 39.0 35.0 39.0 12 37.02542870448642 39.0 35.0 39.0 34.0 39.0 13 36.91705913304901 39.0 35.0 39.0 33.0 39.0 14 38.117720142120675 40.0 36.0 41.0 33.0 41.0 15 38.234090863624544 40.0 36.0 41.0 33.0 41.0 16 38.30038368115245 40.0 36.0 41.0 34.0 41.0 17 38.23449748097296 40.0 36.0 41.0 34.0 41.0 18 38.08834738892577 40.0 36.0 41.0 34.0 41.0 19 38.00064947118809 40.0 36.0 41.0 34.0 41.0 20 37.83203260754773 40.0 35.0 41.0 34.0 41.0 21 37.7058912061322 40.0 35.0 41.0 33.0 41.0 22 37.67027822582709 40.0 35.0 41.0 33.0 41.0 23 37.59169756229643 39.0 35.0 41.0 33.0 41.0 24 37.57240766320174 39.0 35.0 41.0 33.0 41.0 25 37.46782675123439 39.0 35.0 41.0 33.0 41.0 26 37.43227820628712 39.0 35.0 41.0 33.0 41.0 27 37.36260218354447 39.0 35.0 41.0 33.0 41.0 28 37.29330067678062 39.0 35.0 41.0 33.0 41.0 29 37.16328687319168 39.0 35.0 41.0 33.0 41.0 30 37.10736396114152 39.0 35.0 41.0 33.0 41.0 31 36.90091516817628 39.0 35.0 41.0 32.0 41.0 32 36.70076545483221 39.0 35.0 41.0 31.0 41.0 33 36.48327355810185 39.0 35.0 41.0 31.0 41.0 34 36.238062128711604 39.0 35.0 41.0 30.0 41.0 35 36.070028905189766 39.0 35.0 41.0 30.0 41.0 36 35.97649435364823 39.0 35.0 41.0 29.0 41.0 37 35.72929496552825 39.0 35.0 41.0 27.0 41.0 38 35.80262891607632 39.0 35.0 41.0 29.0 41.0 39 35.70395093421964 39.0 35.0 41.0 28.0 41.0 40 35.59557764088431 38.0 35.0 41.0 27.0 41.0 41 35.50903002222438 38.0 35.0 41.0 27.0 41.0 42 35.49593824626961 38.0 35.0 41.0 27.0 41.0 43 35.38864267500248 38.0 35.0 41.0 26.0 41.0 44 35.253269803637316 38.0 35.0 40.0 26.0 41.0 45 35.208795914844835 38.0 35.0 40.0 26.0 41.0 46 35.04975107481434 38.0 35.0 40.0 25.0 41.0 47 35.027642070659304 38.0 35.0 40.0 25.0 41.0 48 34.89471820812946 37.0 34.0 40.0 24.0 41.0 49 34.85069955397706 37.0 34.0 40.0 24.0 41.0 50 34.73294521691919 37.0 34.0 40.0 24.0 41.0 51 34.19495347860211 36.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 4.0 11 6.0 12 13.0 13 30.0 14 41.0 15 109.0 16 229.0 17 595.0 18 1315.0 19 2675.0 20 4803.0 21 7723.0 22 12113.0 23 18055.0 24 27651.0 25 44819.0 26 65855.0 27 77428.0 28 76422.0 29 74105.0 30 78326.0 31 88738.0 32 108826.0 33 143268.0 34 263953.0 35 497039.0 36 269294.0 37 357124.0 38 603965.0 39 1473806.0 40 549.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.24554663282221 22.98481326075012 27.765358528101025 17.004281578326644 2 34.77848426637437 23.891560642976476 28.313849973086025 13.016105117563125 3 28.639632350922867 24.12013169935811 34.15255408266614 13.087681867052876 4 25.87633249761217 26.265294092743186 33.02235325370643 14.836020155938218 5 22.564052700213683 30.77169831598076 32.08108526821625 14.58316371558931 6 20.794197188943546 38.67051945133642 29.848737415914183 10.686545943805854 7 83.27169715288765 4.257781441779514 10.371115094575753 2.0994063107570757 8 84.3084783439043 3.4224712378706834 9.880638733512574 2.3884116847124437 9 79.250651681065 5.581567486616288 11.807721170294974 3.3600596620237537 10 41.74050369375107 29.44842403210881 17.36167682667261 11.449395447467504 11 33.14454781499004 23.326506752220695 27.790481339101653 15.738464093687615 12 30.409092410538367 21.78405920423031 30.55347878820586 17.253369597025458 13 23.327855940218875 28.641400252437727 31.31546760297212 16.71527620437128 14 17.76054797503165 31.65839397313069 32.94775246215178 17.633305589685875 15 17.08379062277122 24.70409748395048 41.33088556513066 16.881226328147644 16 20.37711200260905 21.871384234319528 39.20819413047392 18.5433096325975 17 20.540735940181655 21.363554524176287 32.31472741052209 25.780982125119973 18 22.773828172068924 23.57901426463904 33.525274710959735 20.121882852332305 19 25.995572802417 25.066936008013247 29.652477085902802 19.285014103666953 20 26.91657970607242 24.991544313149326 28.91640198544645 19.17547399533181 21 24.5903935023106 25.005710787130237 31.478789136338236 18.925106574220926 22 22.832820254196324 23.182934539724513 31.22632814764397 22.757917058435194 23 20.488792202251656 26.400398987457667 30.8957073025033 22.215101507787374 24 21.058265846794587 25.07314692517729 34.23120243821533 19.637384789812792 25 21.05684687321029 25.808012408807684 32.24745410550929 20.88768661247273 26 19.339330551524792 28.966926749792155 29.87767517228898 21.81606752639407 27 19.469759811969716 27.49421826419055 32.55323128199378 20.48279064184595 28 18.96062743755237 26.087061705810953 35.622610715995464 19.32970014064122 29 19.24539915261689 25.572928031055515 35.16542207950811 20.01625073681948 30 21.341711635722962 24.746620167755246 33.583359580467665 20.328308616054127 31 25.614380669206554 25.095222432250992 29.126154195439653 20.164242703102804 32 25.492790916335924 25.68907450820934 28.927381584328206 19.890752991126533 33 24.6732522548886 25.767025007897402 28.612555543511082 20.94716719370292 34 21.405076947913436 26.894411151550567 30.514398859982666 21.186113040553334 35 21.267366724650735 26.19813709704058 30.608376782614645 21.926119395694045 36 25.29238997488184 26.193484724633052 28.509482232822393 20.00464306766271 37 21.982227006928778 28.671780244258855 28.915471510964945 20.430521237847422 38 22.16064548875731 29.631052910966154 26.59924138415523 21.60906021612131 39 22.12931176059264 27.81965171409683 28.10453973847154 21.946496786838996 40 22.55160760402356 26.353130883797228 28.813072794275346 22.282188717903864 41 20.473997657995728 25.46566758520006 29.255978647471597 24.804356109332613 42 22.621044262205846 27.273091003660955 27.135915803225117 22.96994893090808 43 22.3209197181965 27.14780261472634 27.799623250882437 22.731654416194722 44 21.468186379621493 28.33041241885681 28.837381440104657 21.364019761417037 45 20.530105269230464 29.576527106349975 27.726208814291713 22.167158810127845 46 22.8976743255572 28.33660007415882 28.53181362037851 20.23391197990547 47 21.57761017864645 27.3271050473123 29.31818086656019 21.77710390748106 48 22.421829675715685 26.043492238214494 29.570083570565558 21.964594515504263 49 21.769287921836423 25.287225841509493 30.324163352239026 22.619322884415062 50 20.33717138549046 27.833050546630496 29.949414754813 21.88036331306605 51 20.61305706925661 28.983233315080525 28.292076870218814 22.111632745444048 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3413.0 1 5350.0 2 7287.0 3 46171.5 4 85056.0 5 57542.0 6 30028.0 7 30030.5 8 30033.0 9 30611.5 10 31190.0 11 30845.5 12 30501.0 13 29212.0 14 27923.0 15 26488.0 16 25053.0 17 24133.0 18 23213.0 19 22174.5 20 21136.0 21 21759.0 22 22382.0 23 25003.5 24 27625.0 25 29335.5 26 35440.0 27 39834.0 28 47668.5 29 55503.0 30 64619.5 31 73736.0 32 81661.5 33 89587.0 34 102270.5 35 114954.0 36 125738.0 37 136522.0 38 152833.0 39 169144.0 40 204306.5 41 239469.0 42 268953.0 43 298437.0 44 310895.5 45 323354.0 46 315957.0 47 308560.0 48 316149.5 49 323739.0 50 320539.5 51 317340.0 52 305406.5 53 293473.0 54 267158.5 55 240844.0 56 221235.5 57 201627.0 58 189176.5 59 176726.0 60 162088.0 61 147450.0 62 130312.0 63 113174.0 64 96936.5 65 80699.0 66 67241.0 67 53783.0 68 45239.0 69 36695.0 70 31702.0 71 26709.0 72 23449.0 73 20189.0 74 16236.0 75 8527.5 76 4772.0 77 3685.5 78 2599.0 79 1805.0 80 1011.0 81 678.0 82 345.0 83 253.5 84 162.0 85 191.5 86 221.0 87 122.0 88 23.0 89 19.5 90 16.0 91 10.5 92 5.0 93 4.5 94 4.0 95 4.0 96 4.0 97 3.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4298882.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.50186765539997 #Duplication Level Percentage of deduplicated Percentage of total 1 81.36959856764689 15.868591424392726 2 6.8108314326351795 2.6564786644497893 3 2.18440445614851 1.2779989982902256 4 1.1720111549392762 0.9142562573711294 5 0.7313992367744824 0.7131825559418251 6 0.5226544304402263 0.6115642519172246 7 0.4169132643138246 0.5691411113100296 8 0.32393041993313915 0.5053798543275373 9 0.2707794369900066 0.4752634269584541 >10 3.3524900756143854 15.891148742322317 >50 1.5867161420448601 22.67511341548486 >100 1.2508095503399486 35.10587306419926 >500 0.004159054001595024 0.5456271715578473 >1k 0.0031804530600432475 0.9713079711940048 >5k 0.0 0.0 >10k+ 1.2232511769397108E-4 1.219073090282838 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 51102 1.188727673846363 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.652372407523631E-5 0.0 0.0 0.02177310286721059 0.0 2 4.652372407523631E-5 0.0 0.0 0.07464731527871665 0.0 3 4.652372407523631E-5 0.0 0.0 0.12140365797432914 0.0 4 4.652372407523631E-5 0.0 0.0 0.18516442181944048 0.0 5 4.652372407523631E-5 0.0 0.0 0.33720395209731274 0.0 6 4.652372407523631E-5 0.0 0.0 0.6049712460123353 0.0 7 4.652372407523631E-5 0.0 0.0 0.8021620505052244 0.0 8 4.652372407523631E-5 0.0 0.0 1.249580704936772 0.0 9 4.652372407523631E-5 0.0 0.0 1.4985989380494742 0.0 10 4.652372407523631E-5 0.0 0.0 1.8547845695694833 0.0 11 4.652372407523631E-5 0.0 0.0 2.0957774602792076 0.0 12 4.652372407523631E-5 0.0 0.0 2.3029010798621594 0.0 13 4.652372407523631E-5 0.0 0.0 2.40436932207025 0.0 14 4.652372407523631E-5 0.0 0.0 2.454196230554828 0.0 15 4.652372407523631E-5 0.0 0.0 2.5032554975921646 0.0 16 9.304744815047262E-5 0.0 0.0 2.5910922886462107 0.0 17 9.304744815047262E-5 0.0 0.0 2.697631616778502 0.0 18 9.304744815047262E-5 0.0 0.0 2.860627484076092 0.0 19 9.304744815047262E-5 0.0 0.0 2.938089484661361 0.0 20 9.304744815047262E-5 0.0 0.0 3.024995801233902 0.0 21 9.304744815047262E-5 0.0 0.0 3.127580612819798 0.0 22 9.304744815047262E-5 0.0 0.0 3.2363065559836257 0.0 23 9.304744815047262E-5 0.0 0.0 3.358780259611685 0.0 24 9.304744815047262E-5 0.0 0.0 3.4545958693446344 0.0 25 9.304744815047262E-5 0.0 0.0 3.5364543618550126 0.0 26 9.304744815047262E-5 0.0 0.0 3.6189874483644817 0.0 27 9.304744815047262E-5 0.0 0.0 3.7080105943824466 0.0 28 9.304744815047262E-5 0.0 0.0 3.80075563832643 0.0 29 9.304744815047262E-5 0.0 0.0 3.905410755633674 0.0 30 9.304744815047262E-5 0.0 0.0 4.046726567512204 0.0 31 9.304744815047262E-5 0.0 0.0 4.164733993629041 0.0 32 9.304744815047262E-5 0.0 0.0 4.276321145823496 0.0 33 9.304744815047262E-5 0.0 0.0 4.396026687869078 0.0 34 9.304744815047262E-5 0.0 0.0 4.520198507425884 0.0 35 9.304744815047262E-5 0.0 0.0 4.658606586549713 0.0 36 9.304744815047262E-5 0.0 0.0 4.778405176043446 0.0 37 9.304744815047262E-5 0.0 0.0 4.909532292349499 0.0 38 1.1630931018809076E-4 0.0 0.0 5.047963633335365 0.0 39 1.1630931018809076E-4 0.0 0.0 5.23854806900957 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 28320 0.0 43.371296 1 CGGTCTA 520 0.0 40.240383 31 CGTAAGG 700 0.0 39.535713 2 TACGGGA 1500 0.0 39.149998 4 TAGGGAC 3785 0.0 38.10436 5 ACGGGTC 280 0.0 36.964283 5 AGGGCGA 2950 0.0 36.838985 6 ACGGGAT 1500 0.0 36.75 5 TAGCGGG 2445 0.0 36.625767 3 GTTTTTT 35025 0.0 36.60385 2 CGTTAGG 610 0.0 36.516396 2 AGGGATT 5615 0.0 36.2244 6 CGACGGT 610 0.0 36.14754 28 CGTACCG 25 0.0021077492 36.000004 36 TCGCGAT 25 0.0021077492 36.000004 23 TCGTTAG 225 0.0 36.0 1 GTAGGGA 4935 0.0 35.744682 4 GTACGGG 1415 0.0 35.618374 3 GGGCGAT 5995 0.0 35.61718 7 GCGCGAC 2050 0.0 35.560978 9 >>END_MODULE