##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546823_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4151877 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.954862342983667 33.0 31.0 34.0 30.0 34.0 2 32.356154096087145 34.0 31.0 34.0 31.0 34.0 3 32.37446003337767 34.0 31.0 34.0 30.0 34.0 4 36.007321026128665 37.0 35.0 37.0 35.0 37.0 5 35.970986375559775 37.0 35.0 37.0 35.0 37.0 6 36.014173830294105 37.0 35.0 37.0 35.0 37.0 7 36.239726273201256 37.0 35.0 37.0 35.0 37.0 8 36.10814602648392 37.0 35.0 37.0 35.0 37.0 9 37.90379026160939 39.0 39.0 39.0 35.0 39.0 10 37.667148376505374 39.0 38.0 39.0 35.0 39.0 11 37.48608689515609 39.0 37.0 39.0 35.0 39.0 12 36.988044684368056 39.0 35.0 39.0 33.0 39.0 13 36.85607136242235 39.0 35.0 39.0 33.0 39.0 14 38.03721449358928 40.0 36.0 41.0 33.0 41.0 15 38.14494769474144 40.0 36.0 41.0 33.0 41.0 16 38.20328588732277 40.0 36.0 41.0 34.0 41.0 17 38.14351003172782 40.0 36.0 41.0 34.0 41.0 18 37.971638851536305 39.0 36.0 41.0 34.0 41.0 19 37.8420090479559 39.0 36.0 41.0 34.0 41.0 20 37.66242545239177 39.0 35.0 41.0 34.0 41.0 21 37.52496979077174 39.0 35.0 41.0 33.0 41.0 22 37.509499679301676 39.0 35.0 41.0 33.0 41.0 23 37.42934749752943 39.0 35.0 41.0 33.0 41.0 24 37.38878776996525 39.0 35.0 41.0 33.0 41.0 25 37.272687509769675 39.0 35.0 41.0 33.0 41.0 26 37.2361924498245 39.0 35.0 41.0 33.0 41.0 27 37.171198954111595 39.0 35.0 41.0 33.0 41.0 28 37.087579665775266 39.0 35.0 41.0 33.0 41.0 29 36.95796744460397 39.0 35.0 41.0 33.0 41.0 30 36.85427458472397 39.0 35.0 41.0 32.0 41.0 31 36.623724883950075 39.0 35.0 41.0 31.0 41.0 32 36.368910976890696 39.0 35.0 41.0 31.0 41.0 33 36.10774692988256 39.0 35.0 41.0 30.0 41.0 34 35.822865898965695 39.0 35.0 41.0 29.0 41.0 35 35.610798200428384 38.0 35.0 41.0 27.0 41.0 36 35.492833964011936 38.0 35.0 41.0 26.0 41.0 37 35.23544796726878 38.0 35.0 41.0 24.0 41.0 38 35.29047946266231 38.0 35.0 41.0 25.0 41.0 39 35.17851636741647 38.0 35.0 41.0 25.0 41.0 40 35.04847975987728 38.0 35.0 41.0 24.0 41.0 41 34.953718522971656 38.0 35.0 40.0 23.0 41.0 42 34.93250932048324 38.0 35.0 40.0 24.0 41.0 43 34.81773135379492 37.0 35.0 40.0 23.0 41.0 44 34.65412655529053 37.0 34.0 40.0 23.0 41.0 45 34.5971024671492 37.0 34.0 40.0 23.0 41.0 46 34.41330342878655 36.0 34.0 40.0 23.0 41.0 47 34.38034026537877 36.0 34.0 40.0 23.0 41.0 48 34.221326402492174 36.0 34.0 40.0 23.0 41.0 49 34.17307015598006 36.0 34.0 40.0 23.0 41.0 50 34.03730722273323 35.0 34.0 40.0 23.0 41.0 51 33.49821369949061 35.0 33.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 6.0 11 14.0 12 23.0 13 25.0 14 63.0 15 131.0 16 332.0 17 717.0 18 1559.0 19 3059.0 20 5313.0 21 8536.0 22 13185.0 23 19831.0 24 29817.0 25 48581.0 26 71813.0 27 84916.0 28 84029.0 29 80954.0 30 81415.0 31 92295.0 32 111261.0 33 145396.0 34 268603.0 35 505839.0 36 278548.0 37 363636.0 38 593767.0 39 1257673.0 40 538.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.88533764367297 21.572098595406366 27.723870432577847 18.81869332834282 2 36.41810679844321 23.694873427127057 27.116867864823547 12.770151909606186 3 28.693817278305687 23.77657141577171 34.015241781006516 13.51436952491608 4 25.76791171800128 25.544615122268794 33.46382852863897 15.223644631090949 5 22.90065433055941 29.466696629018635 32.80884766094949 14.823801379472465 6 20.573297330339987 37.644877244677524 30.937091826178857 10.844733598803625 7 80.88079198878 4.878709075437446 11.991949665175534 2.248549270607005 8 81.47110331062312 3.859290629274422 11.973741033272422 2.6958650268300337 9 76.25324642324424 5.633331623263406 13.979195433776098 4.134226519716263 10 42.29751989280992 23.562523648942392 20.43911705476824 13.70083940347944 11 35.877676530398176 21.777355157679285 26.58982913029456 15.755139181627973 12 31.3203401738539 20.94924777395862 30.89005286042915 16.84035919175833 13 23.9160986705531 26.920161652187673 31.473042192723916 17.69069748453531 14 19.170895476913213 30.064618966313304 33.43846650563106 17.32601905114241 15 17.992585040452788 22.261160434184347 42.26999017552784 17.476264349835027 16 21.27565436066627 19.934477827739116 39.759390752664395 19.030477058930213 17 21.52127820742281 20.15844881724579 32.2372266808482 26.083046294483193 18 23.622400181893635 22.053471237225956 34.33480808800453 19.989320492875873 19 26.915031442405446 23.929514289561084 29.499139786655533 19.65631448137794 20 27.48393076191804 23.46683198948331 28.891510996110913 20.15772625248773 21 25.199879476198355 24.435213278235363 31.350880577627905 19.01402666793838 22 23.46781949465266 22.14343054960443 31.31289775684588 23.075852198897028 23 21.842915866727267 25.277723786133354 30.280063691674876 22.599296655464503 24 22.084565607314474 23.66996902846592 34.36166341151243 19.883801952707174 25 21.95946556220235 23.66780133419174 33.14664668534256 21.226086418263353 26 19.817904046772096 27.166243123290982 30.87719120773568 22.138661622201237 27 20.384683842994384 25.374523378221465 32.86400343748141 21.37678934130274 28 19.881272976053964 24.849050200668277 35.83586411639843 19.433812706879323 29 20.622624417823555 24.547523927129824 34.87771916171891 19.952132493327717 30 22.294181643627688 24.270227658478323 33.0869628363268 20.348627861567188 31 26.649199867915165 23.55975381736983 29.2809252297214 20.510121084993607 32 27.16238944458133 24.769977530644574 28.625149540798056 19.44248348397604 33 26.105036348620153 24.62308011533097 28.61520223262876 20.656681303420115 34 22.801518445753572 26.051759240459194 29.927717030152866 21.219005283634367 35 22.981798352889548 25.79806675390432 30.193235493247993 21.02689939995814 36 26.557506400117344 25.49401150371266 27.628660482957468 20.31982161321253 37 23.88105427978719 28.17983288040566 27.865830322044705 20.073282517762447 38 23.66618760623207 28.78153663993418 25.882486403137666 21.669789350696085 39 23.058631072163266 26.882732797720166 27.361383778951065 22.69725235116551 40 23.944423209069054 24.581339957807035 28.615298574596505 22.85893825852741 41 21.058836762264395 24.89052541778092 28.845700390449906 25.204937429504774 42 23.087702260929213 26.605532871036402 27.45762940472466 22.84913546330973 43 22.682463859117213 25.60894747122807 28.11152642527705 23.597062244377664 44 22.187362486894482 27.272821425104837 28.73466627262802 21.805149815372662 45 21.80685988530007 28.56341842496779 27.3124661448304 22.31725554490174 46 23.54761472943442 26.894125235405575 28.558336386169437 20.999923648990563 47 22.841572618842033 26.274935408732002 28.809331297627555 22.07416067479841 48 23.210152901928453 24.98571128190936 29.778122039742506 22.026013776419678 49 22.94343016423656 24.211627656599653 30.183529039998053 22.66141313916573 50 21.456536405100632 26.335462249965495 29.47958236720404 22.72841897772983 51 21.400730320286463 28.13850217624462 28.076000324672428 22.384767178796483 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3813.0 1 5920.0 2 8027.0 3 54263.5 4 100500.0 5 67462.0 6 34424.0 7 34380.0 8 34336.0 9 35005.5 10 35675.0 11 35139.5 12 34604.0 13 32717.0 14 30830.0 15 28921.5 16 27013.0 17 25682.0 18 24351.0 19 22695.5 20 21040.0 21 20742.0 22 20444.0 23 21853.0 24 23262.0 25 24290.0 26 30146.0 27 34974.0 28 38342.0 29 41710.0 30 48642.5 31 55575.0 32 63038.5 33 70502.0 34 77572.0 35 84642.0 36 93965.5 37 103289.0 38 119358.0 39 135427.0 40 162599.0 41 189771.0 42 225028.0 43 260285.0 44 265375.5 45 270466.0 46 277111.0 47 283756.0 48 290511.0 49 297266.0 50 295683.0 51 294100.0 52 288856.5 53 283613.0 54 261656.0 55 239699.0 56 226325.0 57 212951.0 58 207770.0 59 202589.0 60 187316.5 61 172044.0 62 156466.5 63 140889.0 64 127504.5 65 114120.0 66 98012.5 67 81905.0 68 67422.5 69 52940.0 70 47514.5 71 42089.0 72 35354.0 73 28619.0 74 23136.0 75 12891.0 76 8129.0 77 6306.0 78 4483.0 79 3538.5 80 2594.0 81 1946.0 82 1298.0 83 888.0 84 478.0 85 335.0 86 192.0 87 137.5 88 83.0 89 71.5 90 60.0 91 42.5 92 25.0 93 18.5 94 12.0 95 10.0 96 8.0 97 6.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4151877.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.96249732639162 #Duplication Level Percentage of deduplicated Percentage of total 1 81.59070061745192 17.10344843551755 2 6.609533752662205 2.7710466723775333 3 2.109467976122005 1.326591504286988 4 1.1428167604245298 0.9582517313981896 5 0.7265508536155116 0.7615160163201357 6 0.5256959783426195 0.6611940324301193 7 0.42345044533364995 0.6213605179716185 8 0.3466545894516197 0.581339672364877 9 0.2909498214267482 0.5489131368395096 >10 3.5839548257391884 18.47057602923772 >50 1.700882306084929 25.980100024880535 >100 0.9412398044621015 26.815955700580467 >500 0.004227270721581357 0.6030685289937563 >1k 0.00364014978802835 1.177682069435797 >5k 1.1742418671059197E-4 0.1242813470567122 >10k+ 1.1742418671059197E-4 1.4946745803085124 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 60722 1.46251924129737 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5049 0.12160764878150292 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.225647580600292E-5 0.0 0.0 0.018545828790207417 0.0 2 7.225647580600292E-5 0.0 0.0 0.07721808714468179 0.0 3 7.225647580600292E-5 0.0 0.0 0.14985993082165006 0.0 4 7.225647580600292E-5 0.0 0.0 0.22341702319216103 0.0 5 7.225647580600292E-5 0.0 0.0 0.395242922658836 0.0 6 7.225647580600292E-5 0.0 0.0 0.7316449885196503 0.0 7 7.225647580600292E-5 0.0 0.0 0.9847112522842079 0.0 8 7.225647580600292E-5 0.0 0.0 1.4881702902085008 0.0 9 7.225647580600292E-5 0.0 0.0 1.8252949208273752 0.0 10 7.225647580600292E-5 0.0 0.0 2.301368754421193 0.0 11 7.225647580600292E-5 0.0 0.0 2.6328814654191346 0.0 12 7.225647580600292E-5 0.0 0.0 2.8958468663691144 0.0 13 7.225647580600292E-5 0.0 0.0 3.019429525489315 0.0 14 7.225647580600292E-5 0.0 0.0 3.0778368434325007 0.0 15 7.225647580600292E-5 0.0 0.0 3.135714280553109 0.0 16 1.9268393548267445E-4 0.0 0.0 3.2374995694718316 0.0 17 1.9268393548267445E-4 0.0 0.0 3.343451648495367 0.0 18 1.9268393548267445E-4 0.0 0.0 3.5160723691959084 0.0 19 1.9268393548267445E-4 0.0 0.0 3.596686510703472 0.0 20 1.9268393548267445E-4 0.0 0.0 3.6907885276948234 0.0 21 2.1676942741800877E-4 0.0 0.0 3.7936817492425714 0.0 22 2.1676942741800877E-4 0.0 0.0 3.909557050943465 0.0 23 2.1676942741800877E-4 0.0 0.0 4.034488497612044 0.0 24 2.1676942741800877E-4 0.0 0.0 4.133431698482397 0.0 25 2.1676942741800877E-4 0.0 0.0 4.221126974618949 0.0 26 2.1676942741800877E-4 0.0 0.0 4.308870421739372 0.0 27 2.1676942741800877E-4 0.0 0.0 4.4037190889807185 0.0 28 2.4085491935334308E-4 0.0 0.0 4.4970021992462685 0.0 29 2.4085491935334308E-4 0.0 0.0 4.596619793890811 0.0 30 2.4085491935334308E-4 0.0 0.0 4.743709893139898 0.0 31 2.4085491935334308E-4 0.0 0.0 4.85339522341341 0.0 32 2.4085491935334308E-4 0.0 0.0 4.965248247961103 0.0 33 2.4085491935334308E-4 0.0 0.0 5.079341223258782 0.0 34 2.4085491935334308E-4 0.0 0.0 5.196155859145153 0.0 35 2.4085491935334308E-4 0.0 0.0 5.327831243555625 0.0 36 2.4085491935334308E-4 0.0 0.0 5.444453195506514 0.0 37 2.4085491935334308E-4 0.0 0.0 5.566759323554142 0.0 38 2.4085491935334308E-4 0.0 0.0 5.707201827029076 0.0 39 2.4085491935334308E-4 0.0 0.0 5.899548565624656 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 32660 0.0 43.808178 1 CGGTCTA 515 0.0 41.06796 31 TCACGAC 535 0.0 40.373833 25 CGCATTA 35 6.252234E-6 38.57143 11 TATGCGC 35 6.252234E-6 38.57143 29 GTTTTTT 39290 0.0 38.036396 2 TAGGGAC 2590 0.0 37.528957 5 TAACGCC 325 0.0 37.384617 12 AGGGCGA 3095 0.0 37.075928 6 CGGAATA 55 2.75395E-9 36.81818 24 CGACGGT 595 0.0 36.30252 28 GGGCGAT 5885 0.0 36.12999 7 TCAGACG 1825 0.0 35.50685 22 CACGACG 615 0.0 35.487804 26 CGCTAAT 45 8.707211E-7 35.000004 16 ATAACGC 360 0.0 35.000004 11 GTTGATC 1795 0.0 34.972145 16 CTCACGA 620 0.0 34.838707 24 ACACGCG 815 0.0 34.78528 36 TATGGGC 1795 0.0 34.72145 4 >>END_MODULE