##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546821_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2103777 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00448716760379 33.0 31.0 34.0 30.0 34.0 2 32.3908826838586 34.0 31.0 34.0 31.0 34.0 3 32.44261582857879 34.0 31.0 34.0 31.0 34.0 4 36.027258592521925 37.0 35.0 37.0 35.0 37.0 5 35.97994036440174 37.0 35.0 37.0 35.0 37.0 6 36.042020138065965 37.0 35.0 37.0 35.0 37.0 7 36.26034365809684 37.0 36.0 37.0 35.0 37.0 8 36.13946630274977 37.0 36.0 37.0 35.0 37.0 9 38.00337155506501 39.0 39.0 39.0 35.0 39.0 10 37.71969890344842 39.0 38.0 39.0 35.0 39.0 11 37.456611608549764 39.0 37.0 39.0 35.0 39.0 12 36.53829279434085 38.0 35.0 39.0 33.0 39.0 13 36.22841394311279 38.0 35.0 39.0 33.0 39.0 14 37.28424448028475 39.0 35.0 41.0 33.0 41.0 15 37.49528300765718 39.0 35.0 41.0 33.0 41.0 16 37.64521001988329 39.0 35.0 41.0 34.0 41.0 17 37.56603004976288 39.0 35.0 41.0 34.0 41.0 18 37.544710774953806 39.0 35.0 41.0 34.0 41.0 19 37.50993950404439 39.0 35.0 41.0 34.0 41.0 20 37.32937473886253 39.0 35.0 41.0 34.0 41.0 21 37.198112252391766 39.0 35.0 41.0 33.0 41.0 22 37.14239389440991 38.0 35.0 41.0 33.0 41.0 23 37.08548719754993 38.0 35.0 41.0 33.0 41.0 24 37.073409871863795 38.0 35.0 41.0 33.0 41.0 25 36.98706516897941 38.0 35.0 41.0 33.0 41.0 26 36.9069140883278 38.0 35.0 41.0 33.0 41.0 27 36.84283933135499 38.0 35.0 41.0 33.0 41.0 28 36.836452247552856 38.0 35.0 41.0 33.0 41.0 29 36.77192924915521 38.0 35.0 41.0 33.0 41.0 30 36.76934152241421 38.0 35.0 41.0 33.0 41.0 31 36.57404705917025 38.0 35.0 41.0 32.0 41.0 32 36.388824956257245 38.0 35.0 41.0 32.0 41.0 33 36.28201563188494 38.0 35.0 41.0 31.0 41.0 34 36.15616769267845 38.0 35.0 41.0 31.0 41.0 35 36.04254395784344 38.0 35.0 41.0 31.0 41.0 36 35.93302759750677 38.0 35.0 41.0 31.0 41.0 37 35.667404387442204 37.0 35.0 40.0 30.0 41.0 38 35.76026166271425 37.0 35.0 40.0 30.0 41.0 39 35.71585676618767 37.0 35.0 40.0 30.0 41.0 40 35.57784451488917 37.0 35.0 40.0 30.0 41.0 41 35.54655935491262 37.0 35.0 40.0 30.0 41.0 42 35.528633975939464 36.0 35.0 40.0 30.0 41.0 43 35.41307990343083 36.0 35.0 40.0 30.0 41.0 44 35.29210415362465 36.0 35.0 40.0 30.0 41.0 45 35.24747965207339 36.0 35.0 40.0 29.0 41.0 46 35.10043745130781 35.0 35.0 40.0 29.0 41.0 47 35.07759615206365 35.0 35.0 40.0 29.0 41.0 48 34.994316888149264 35.0 35.0 40.0 29.0 41.0 49 34.9945008430076 36.0 35.0 40.0 29.0 41.0 50 34.84457192943929 35.0 34.0 40.0 29.0 41.0 51 34.31053671563098 35.0 34.0 39.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 3.0 11 4.0 12 4.0 13 16.0 14 14.0 15 36.0 16 99.0 17 244.0 18 524.0 19 1178.0 20 2174.0 21 3761.0 22 6337.0 23 8963.0 24 12416.0 25 17940.0 26 24393.0 27 28680.0 28 29632.0 29 31331.0 30 35992.0 31 44027.0 32 56765.0 33 79517.0 34 168455.0 35 413785.0 36 120706.0 37 154172.0 38 253323.0 39 608967.0 40 318.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.3592391208764 22.90047852029944 30.267038759336184 13.473243599487969 2 30.497624035247085 25.747928606501546 30.73724068663171 13.017206671619663 3 28.49593849538235 25.44019637062293 32.64224297537239 13.421622158622327 4 25.39190227861603 26.460646732044317 32.452821758199654 15.694629231139992 5 23.378428417080325 31.226788770863074 29.83709775323145 15.557685058825152 6 20.184838982458693 40.542177236465655 28.037619956868053 11.235363824207603 7 86.14891217082419 4.462877957121882 7.746400878039831 1.6418089940140994 8 87.51464627667286 4.149346627518031 6.121799030980945 2.214208064828164 9 83.710916128468 4.601438270310969 7.718451147626388 3.9691944535946537 10 54.51628190630471 20.813089980544515 13.487741333801065 11.182886779349714 11 47.45645569848896 19.318872675193237 18.958425726681106 14.2662458996367 12 41.04993067230985 20.409149829093103 23.559959064102326 14.980960434494719 13 22.40432327190572 39.29090393135775 23.50258606306657 14.802186733669966 14 14.840926581096761 42.14767059436433 27.463462144514367 15.547940680024547 15 13.27802328859 22.617178531755027 48.32147133465192 15.78332684500306 16 15.333659413521492 17.03588355609934 45.93737834380735 21.693078686571816 17 16.0061641514286 18.634674682725404 28.61291857454474 36.74624259130127 18 21.104993542566536 22.45670524965336 33.6377382203532 22.8005629874269 19 28.25879358886422 24.96324467849967 24.796782168452264 21.981179564183847 20 31.125257097116283 22.887882128191343 24.08558511667349 21.901275658018886 21 22.275697471737736 28.425446233132124 26.994163354766215 22.30469294036393 22 22.108854693249334 23.296385500934747 26.149587147306963 28.44517265850896 23 19.361510274140272 30.50161685387757 24.682654102597375 25.454218769384777 24 20.345977734332106 24.70946302768782 36.16224533303672 18.782313904943347 25 18.746140869493296 25.37421979610957 33.778675211298534 22.1009641230986 26 16.903597672186738 33.16939010170755 26.574679730788958 23.35233249531676 27 18.476102742828733 31.19332514805514 29.017571729323024 21.313000379793106 28 15.478304021766565 27.475202932630218 39.04011689451876 18.006376151084456 29 15.965047626245557 24.16125853643233 38.36628121706816 21.50741262025395 30 19.40709495350505 28.06766116370699 33.21839719704132 19.30684668574664 31 29.631039791765 24.928307515482867 24.249623415409523 21.191029277342608 32 29.895326358259457 26.053997167950786 25.5769979422724 18.47367853151736 33 27.311022033228806 25.748926811159166 25.306722147832204 21.633329007779817 34 19.390553276321587 26.93674282017533 28.49940844490647 25.173295458596613 35 20.25937159689454 24.868652903801117 31.297138432447923 23.57483706685642 36 30.01962660491107 24.045181594817322 26.644649123932812 19.290542676338795 37 20.746590536924778 29.402165723838603 29.407156747126717 20.444086992109906 38 21.16108313761392 32.02116954411043 23.86621775977207 22.951529558503587 39 20.23303800735534 29.812760573007502 26.046201664910303 23.907999754726855 40 22.475861272368697 25.6014301896066 26.783494638452648 25.139213899572056 41 18.36173700919822 22.287343192743336 27.210441030584516 32.14047876747393 42 22.744425858824393 25.91933460628194 24.33285467043323 27.003384864460443 43 22.937934961737867 26.359685460959025 24.968520903118534 25.733858674184575 44 20.46756856834161 29.642210177219354 28.235216945522268 21.655004308916773 45 18.670562516844704 34.661658531298706 22.852612230288667 23.815166721567923 46 22.90537447647731 31.35522443681056 25.88520551370226 19.85419557300988 47 21.913063979689863 27.04174444344624 27.41502545184209 23.630166125021805 48 23.325048234675062 23.59209174736676 29.631467593761123 23.451392424197053 49 20.87226925667502 22.700267186113358 31.924961628537623 24.502501928674 50 19.012376311747868 30.499192642566204 27.667856431551442 22.820574614134483 51 19.47521053799904 32.11186356728874 24.92269855597813 23.490227338734098 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1538.0 1 2394.0 2 3250.0 3 9723.0 4 16196.0 5 11516.5 6 6837.0 7 7503.0 8 8169.0 9 8886.0 10 9603.0 11 9733.5 12 9864.0 13 9551.5 14 9239.0 15 8954.0 16 8669.0 17 7893.5 18 7118.0 19 6671.5 20 6225.0 21 5862.5 22 5500.0 23 6416.5 24 7333.0 25 8185.0 26 10733.5 27 12430.0 28 13753.5 29 15077.0 30 18837.0 31 22597.0 32 26381.5 33 30166.0 34 37031.5 35 43897.0 36 46213.0 37 48529.0 38 58581.5 39 68634.0 40 104447.0 41 140260.0 42 172556.5 43 204853.0 44 217577.0 45 230301.0 46 212914.5 47 195528.0 48 184556.5 49 173585.0 50 166235.0 51 158885.0 52 148603.5 53 138322.0 54 125421.5 55 112521.0 56 105041.5 57 97562.0 58 88290.5 59 79019.0 60 73776.0 61 68533.0 62 59942.5 63 51352.0 64 42431.5 65 33511.0 66 28158.5 67 22806.0 68 19831.5 69 16857.0 70 14553.0 71 12249.0 72 10469.0 73 8689.0 74 6395.5 75 3185.0 76 2268.0 77 1897.0 78 1526.0 79 1097.0 80 668.0 81 482.5 82 297.0 83 214.0 84 131.0 85 73.0 86 15.0 87 13.5 88 12.0 89 9.0 90 6.0 91 5.0 92 4.0 93 3.0 94 2.0 95 3.5 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2103777.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.076138216771188 #Duplication Level Percentage of deduplicated Percentage of total 1 80.68652186690693 14.585007214967405 2 7.995522449299367 2.890563378176645 3 2.5630620405794926 1.3899079111102353 4 1.2308201265499166 0.8899389891000038 5 0.7200926359218998 0.6508247007901677 6 0.4989086054782889 0.541100454609727 7 0.3902789888183856 0.4938315861487984 8 0.29203983618121154 0.42231619548918364 9 0.24076720627016396 0.3916927168744807 >10 2.4792203964534476 10.470960496218423 >50 1.2125969578466307 16.350410192375843 >100 1.6763106774174468 47.74615332503147 >500 0.009061138796424055 1.1062114390785713 >1k 0.004264065315964262 1.3375894620674829 >5k 2.6650408224776636E-4 0.24472212300305457 >10k+ 2.6650408224776636E-4 0.4887698149584629 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10146 0.4822754502972511 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5080 0.24147046003449987 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCG 4153 0.1974068544337161 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTC 2876 0.13670650453921684 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2511 0.11935675691862778 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGC 2195 0.10433615349915891 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.506711024980309E-5 0.0 0.0 0.040973924517665135 0.0 2 1.4260066537470463E-4 0.0 0.0 0.15191724217918534 0.0 3 1.4260066537470463E-4 0.0 0.0 0.21912968912579614 0.0 4 1.4260066537470463E-4 0.0 0.0 0.3811715785465855 0.0 5 1.4260066537470463E-4 0.0 0.0 0.7670014454954114 0.0 6 1.4260066537470463E-4 0.0 0.0 1.1047748882129618 0.0 7 1.4260066537470463E-4 0.0 0.0 1.377427360409397 0.0 8 1.4260066537470463E-4 0.0 0.0 2.0391419813031515 0.0 9 1.4260066537470463E-4 0.0 0.0 2.335228496176163 0.0 10 1.4260066537470463E-4 0.0 0.0 2.9979888552826655 0.0 11 1.4260066537470463E-4 0.0 0.0 3.3562967938141735 0.0 12 1.4260066537470463E-4 0.0 0.0 3.808340903051987 0.0 13 1.4260066537470463E-4 0.0 0.0 3.951559504643315 0.0 14 1.4260066537470463E-4 0.0 0.0 3.999378261098966 0.0 15 1.4260066537470463E-4 0.0 0.0 4.080042704145924 0.0 16 2.3766777562450774E-4 0.0 0.0 4.226350986820371 0.0 17 2.3766777562450774E-4 0.0 0.0 4.389200946678284 0.0 18 2.3766777562450774E-4 0.0 0.0 4.664135029520715 0.0 19 2.3766777562450774E-4 0.0 0.0 4.802267540713678 0.0 20 2.3766777562450774E-4 0.0 0.0 4.924618911605175 0.0 21 2.3766777562450774E-4 0.0 0.0 5.076346019563861 0.0 22 2.3766777562450774E-4 0.0 0.0 5.233682087027285 0.0 23 2.3766777562450774E-4 0.0 0.0 5.406228892130677 0.0 24 2.3766777562450774E-4 0.0 0.0 5.5347596251884115 0.0 25 2.3766777562450774E-4 0.0 0.0 5.634627624505829 0.0 26 2.3766777562450774E-4 0.0 0.0 5.736111764697494 0.0 27 2.3766777562450774E-4 0.0 0.0 5.846104411256516 0.0 28 2.3766777562450774E-4 0.0 0.0 5.949680027873677 0.0 29 2.3766777562450774E-4 0.0 0.0 6.074740811407293 0.0 30 2.3766777562450774E-4 0.0 0.0 6.253086710235923 0.0 31 2.3766777562450774E-4 0.0 0.0 6.393453298519757 0.0 32 2.3766777562450774E-4 0.0 0.0 6.517040541844501 0.0 33 2.3766777562450774E-4 0.0 0.0 6.643337197811365 0.0 34 2.3766777562450774E-4 0.0 0.0 6.777714558149461 0.0 35 2.3766777562450774E-4 0.0 0.0 6.967658644428568 0.0 36 2.3766777562450774E-4 0.0 0.0 7.09946919278992 0.0 37 2.3766777562450774E-4 0.0 0.0 7.231755076702521 0.0 38 2.3766777562450774E-4 0.0 0.0 7.375686681620723 0.0 39 2.8520133074940926E-4 9.506711024980309E-5 0.0 7.57271326761344 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAGTTA 35 1.2125747E-7 45.000004 32 TCGATAG 85 0.0 45.000004 1 TACGACC 35 1.2125747E-7 45.000004 31 GATATAC 35 1.2125747E-7 45.000004 11 ACACGAT 20 7.034624E-4 45.0 44 ACGCCGT 25 3.891915E-5 45.0 40 GACCGTT 25 3.891915E-5 45.0 44 TAAGTCG 40 6.8193913E-9 45.0 1 TCGCTAC 20 7.034624E-4 45.0 19 ACGTACT 20 7.034624E-4 45.0 30 CAATACG 25 3.891915E-5 45.0 1 TCGGTAA 20 7.034624E-4 45.0 12 TACACGA 20 7.034624E-4 45.0 34 TAATCGC 20 7.034624E-4 45.0 28 TATGCGA 30 2.1663654E-6 44.999996 19 TCACGAC 445 0.0 43.483147 25 CGACGGT 455 0.0 42.52747 28 ATTAGCG 180 0.0 42.500004 1 TAACGCC 170 0.0 42.352943 12 CGTTTTT 6745 0.0 41.997776 1 >>END_MODULE