##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546815_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5718354 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.600643471880193 31.0 31.0 33.0 30.0 34.0 2 31.977212673437148 31.0 31.0 34.0 30.0 34.0 3 31.993676676889887 33.0 31.0 34.0 30.0 34.0 4 35.73499821801868 37.0 35.0 37.0 33.0 37.0 5 35.66832291250245 37.0 35.0 37.0 33.0 37.0 6 35.72802872994571 37.0 35.0 37.0 33.0 37.0 7 36.07167604523959 37.0 35.0 37.0 35.0 37.0 8 35.9559053182087 37.0 35.0 37.0 35.0 37.0 9 37.71153429815643 39.0 38.0 39.0 35.0 39.0 10 37.40176333959038 39.0 37.0 39.0 35.0 39.0 11 37.101951890351664 39.0 37.0 39.0 33.0 39.0 12 36.38235355838411 38.0 35.0 39.0 33.0 39.0 13 36.13926052846676 38.0 35.0 39.0 32.0 39.0 14 37.113925265906936 39.0 35.0 41.0 32.0 41.0 15 37.323413170992914 39.0 35.0 41.0 33.0 41.0 16 37.434541478194596 39.0 35.0 41.0 33.0 41.0 17 37.350502259916055 39.0 35.0 41.0 33.0 41.0 18 37.22255932388936 39.0 35.0 41.0 32.0 41.0 19 37.13969386994929 38.0 35.0 41.0 32.0 41.0 20 36.99611339207051 38.0 35.0 41.0 32.0 41.0 21 36.85607379326289 38.0 35.0 41.0 32.0 41.0 22 36.807664583199994 38.0 35.0 41.0 32.0 41.0 23 36.709297465669316 38.0 35.0 41.0 32.0 41.0 24 36.680235606260126 38.0 35.0 41.0 32.0 41.0 25 36.58079860043642 38.0 35.0 41.0 32.0 41.0 26 36.51719428352984 38.0 35.0 40.0 32.0 41.0 27 36.42381636393969 38.0 35.0 40.0 31.0 41.0 28 36.39905679151728 38.0 35.0 40.0 31.0 41.0 29 36.29821466107205 38.0 35.0 40.0 31.0 41.0 30 36.28238038428541 38.0 35.0 40.0 31.0 41.0 31 36.11695760703167 38.0 35.0 40.0 31.0 41.0 32 35.876231167220496 38.0 35.0 40.0 30.0 41.0 33 35.72092983400468 38.0 35.0 40.0 30.0 41.0 34 35.4883566145083 37.0 35.0 40.0 29.0 41.0 35 35.32745192060513 37.0 35.0 40.0 28.0 41.0 36 35.21322709297116 37.0 34.0 40.0 27.0 41.0 37 34.93123703079593 37.0 34.0 40.0 25.0 41.0 38 35.02895570998228 37.0 34.0 40.0 27.0 41.0 39 34.93552252973495 37.0 34.0 40.0 26.0 41.0 40 34.789704344991584 37.0 34.0 40.0 25.0 41.0 41 34.73516784725115 36.0 34.0 40.0 24.0 41.0 42 34.737707564099736 36.0 34.0 40.0 25.0 41.0 43 34.62882063614809 36.0 34.0 40.0 24.0 41.0 44 34.49863194898392 36.0 34.0 40.0 24.0 41.0 45 34.48482710234448 36.0 34.0 40.0 24.0 41.0 46 34.31833058953678 35.0 34.0 40.0 23.0 41.0 47 34.19123282678897 35.0 34.0 40.0 23.0 41.0 48 34.05119322798134 35.0 33.0 40.0 23.0 41.0 49 34.11179685622821 35.0 34.0 40.0 24.0 41.0 50 33.97519181218931 35.0 33.0 40.0 24.0 41.0 51 33.40087042530071 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 6.0 11 14.0 12 19.0 13 34.0 14 74.0 15 182.0 16 495.0 17 1070.0 18 2457.0 19 4928.0 20 8616.0 21 14025.0 22 21600.0 23 31616.0 24 46107.0 25 68154.0 26 92045.0 27 106837.0 28 111310.0 29 118353.0 30 134760.0 31 160554.0 32 199821.0 33 265263.0 34 479485.0 35 838029.0 36 402704.0 37 494740.0 38 734085.0 39 1380572.0 40 395.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.36743545432829 23.24322698454835 29.41717144478988 15.972166116333478 2 32.959851733558295 24.408982025247123 29.654512469847095 12.97665377134749 3 28.27874944433311 24.380249981026008 33.5878471322342 13.75315344240668 4 25.910043344640783 26.173685644505397 32.79263578295433 15.123635227899495 5 23.256097821156228 30.590935783269103 31.41989810354518 14.733068292029488 6 21.442394087529383 38.326605872948754 29.179288305690765 11.051711733831098 7 84.11235121155494 4.58014666458215 9.264554100708002 2.042948023154915 8 85.03826450758383 3.591085826445862 8.971445279533237 2.3992043864370762 9 80.60228520304969 5.4468121420954345 10.555222709192192 3.395679945662686 10 48.92512775529462 23.889374459853308 16.027724061854162 11.157773722997911 11 40.749838152727165 21.182861361853426 23.570209189567485 14.497091295851918 12 36.76440807966768 20.602799337012016 27.539690617265038 15.093101966055267 13 23.011464487857868 32.92774459223756 28.105587726817895 15.955203193086682 14 16.91700094117993 35.670894106940565 31.000161934710587 16.411943017168927 15 15.326735630567818 23.55856248144134 45.45890303398495 15.655798854005889 16 18.28165937260967 20.231118954860086 43.3093858827208 18.177835789809446 17 18.92200098140129 20.214715633204943 30.32390089875513 30.53938248663864 18 22.4340255954773 23.96929256216037 33.68005898200776 19.916622860354572 19 27.409705660055323 24.935951849081047 27.666143089427482 19.988199401436148 20 29.389401215804405 24.356029724637544 26.21277031817198 20.04179874138607 21 23.810645510928495 26.47553824054964 29.94700922678099 19.76680702174087 22 23.163326369791026 23.943778227091222 29.016986356563446 23.875909046554305 23 20.880624039714927 27.646784371866453 28.64985273734365 22.822738851074977 24 21.02970540123959 23.91314003994856 36.11243725029965 18.944717308512203 25 20.065354470884454 24.471430065364963 33.98425490971702 21.478960554033556 26 18.125373140592554 30.981590156887805 29.459263977011567 21.433772725508074 27 18.62717838035211 30.258934651474885 31.412658257953254 19.70122871021976 28 16.75875610359205 27.767291077117644 36.860309802436156 18.61364301685415 29 18.267739283017455 24.925214493541322 36.56176235329257 20.245283870148647 30 20.299267936192827 27.45122110313562 32.55466520610651 19.694845754565037 31 26.776341583609547 25.423294885206477 27.631832516839637 20.16853101434434 32 28.241675838886504 26.468962921847787 27.757270711117222 17.532090528148483 33 26.36337309652393 26.561192259171087 28.030915889432517 19.04451875487247 34 20.69144372663882 27.80401493156947 29.82893329094351 21.6756080508482 35 20.535682121113872 26.61421450997962 31.590244325552426 21.259859043354083 36 27.431949823323286 25.817411793673493 27.8598177027865 18.89082068021672 37 21.312129329523845 30.2546327142391 29.29419899502549 19.139038961211565 38 21.905009728323922 30.605065723458186 25.963485296643057 21.526439251574843 39 20.93245713714121 28.704239017031824 28.47203933159787 21.891264514229096 40 23.43307182451454 26.06697661599824 27.711086092256622 22.788865467230604 41 19.15766320168356 25.46605194431824 28.742694138907805 26.633590715090392 42 22.314777993807308 26.62210139491189 26.731398580780414 24.331722030500387 43 22.295384301146797 26.696510919051182 27.679433627229095 23.328671152572923 44 21.009734619437694 29.348812612860275 28.343400915718053 21.298051851983978 45 18.85909826499024 32.93096230138953 25.534410776247853 22.675528657372386 46 22.22093980190803 30.235990986217367 27.560081100260668 19.982988111613935 47 22.098824242080852 27.67787723530233 28.367516246808083 21.85578227580874 48 22.437348229927704 25.542909725420987 30.151578583627387 21.868163461023922 49 21.53675690592083 25.035858220739744 31.217742028562768 22.20964284477666 50 19.942119707873978 29.718377001493785 28.48050330567153 21.858999984960708 51 19.043277138841002 31.15265336843434 27.045282611045067 22.758786881679587 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4642.0 1 7972.0 2 11302.0 3 52427.5 4 93553.0 5 62925.5 6 32298.0 7 33529.5 8 34761.0 9 37435.5 10 40110.0 11 41506.0 12 42902.0 13 42035.0 14 41168.0 15 39788.5 16 38409.0 17 35711.0 18 33013.0 19 30308.0 20 27603.0 21 27526.5 22 27450.0 23 30609.5 24 33769.0 25 37328.5 26 46527.5 27 52167.0 28 60087.0 29 68007.0 30 76222.0 31 84437.0 32 99534.0 33 114631.0 34 124547.0 35 134463.0 36 151140.5 37 167818.0 38 192129.5 39 216441.0 40 278723.5 41 341006.0 42 398920.0 43 456834.0 44 473325.0 45 489816.0 46 486012.5 47 482209.0 48 447078.5 49 411948.0 50 396248.0 51 380548.0 52 358024.0 53 335500.0 54 310320.5 55 285141.0 56 273153.0 57 261165.0 58 251729.0 59 242293.0 60 225248.0 61 208203.0 62 185778.0 63 163353.0 64 142047.0 65 120741.0 66 96975.0 67 73209.0 68 61498.5 69 49788.0 70 41211.0 71 32634.0 72 25771.0 73 18908.0 74 15529.5 75 9592.0 76 7033.0 77 4961.0 78 2889.0 79 2264.5 80 1640.0 81 1187.5 82 735.0 83 568.5 84 402.0 85 321.5 86 241.0 87 154.0 88 67.0 89 51.5 90 36.0 91 26.0 92 16.0 93 14.0 94 12.0 95 7.0 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5718354.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.868824418330078 #Duplication Level Percentage of deduplicated Percentage of total 1 81.27464410534294 14.522823451806385 2 8.24036182046561 2.944911570268215 3 2.6944998494277623 1.4444263411392455 4 1.298286314635709 0.927954008037853 5 0.7998817315933717 0.7146473108635893 6 0.5298946204581582 0.5681156359910691 7 0.3817393585260249 0.4774863499747246 8 0.3059012292340186 0.4372876283627214 9 0.23842832473309072 0.3834390483910966 >10 1.9955464476583176 7.849744543600642 >50 0.6937957664383098 9.088287238299642 >100 1.5253864666681156 56.2690128036324 >500 0.01807769662910443 2.083948998061092 >1k 0.0033586977343681634 1.0088156700307649 >5k 0.0 0.0 >10k+ 1.975704549628331E-4 1.2790994015404686 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 61019 1.0670727975218044 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 11444 0.20012751921269653 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.246264921689003E-5 0.0 0.0 0.03581450186539693 0.0 2 5.246264921689003E-5 0.0 0.0 0.13418196914706573 0.0 3 5.246264921689003E-5 0.0 0.0 0.20558363473125307 0.0 4 5.246264921689003E-5 0.0 0.0 0.31813350485122116 0.0 5 5.246264921689003E-5 0.0 0.0 0.5807440392812337 0.0 6 5.246264921689003E-5 0.0 0.0 0.9169246954630651 0.0 7 5.246264921689003E-5 0.0 0.0 1.1647057877144367 0.0 8 5.246264921689003E-5 0.0 0.0 1.652660888080731 0.0 9 5.246264921689003E-5 0.0 0.0 1.8955804415046706 0.0 10 5.246264921689003E-5 0.0 0.0 2.252448869027696 0.0 11 5.246264921689003E-5 0.0 0.0 2.5874753469267553 0.0 12 5.246264921689003E-5 0.0 0.0 2.8544752563412477 0.0 13 5.246264921689003E-5 0.0 0.0 2.9624259008798686 0.0 14 5.246264921689003E-5 0.0 0.0 3.0082957438451694 0.0 15 5.246264921689003E-5 0.0 0.0 3.0640110773135065 0.0 16 5.246264921689003E-5 0.0 0.0 3.1815623866588183 0.0 17 5.246264921689003E-5 0.0 0.0 3.3173881854813465 0.0 18 5.246264921689003E-5 0.0 0.0 3.5182676693328183 3.497509947792669E-5 19 5.246264921689003E-5 0.0 0.0 3.6180166530438655 3.497509947792669E-5 20 5.246264921689003E-5 0.0 0.0 3.721280634252444 3.497509947792669E-5 21 5.246264921689003E-5 0.0 0.0 3.859484739839471 3.497509947792669E-5 22 5.246264921689003E-5 0.0 0.0 4.003162448494794 3.497509947792669E-5 23 6.995019895585339E-5 0.0 0.0 4.157857313485664 3.497509947792669E-5 24 6.995019895585339E-5 0.0 0.0 4.2768076268100925 3.497509947792669E-5 25 8.743774869481672E-5 0.0 0.0 4.373583727065515 3.497509947792669E-5 26 8.743774869481672E-5 0.0 0.0 4.474784177404897 3.497509947792669E-5 27 8.743774869481672E-5 0.0 0.0 4.578520322456427 3.497509947792669E-5 28 8.743774869481672E-5 0.0 0.0 4.682955969497516 3.497509947792669E-5 29 8.743774869481672E-5 0.0 0.0 4.804581877932006 3.497509947792669E-5 30 8.743774869481672E-5 0.0 0.0 4.9591018674254865 3.497509947792669E-5 31 8.743774869481672E-5 0.0 0.0 5.095417317640706 3.497509947792669E-5 32 8.743774869481672E-5 0.0 0.0 5.219753796284735 3.497509947792669E-5 33 8.743774869481672E-5 0.0 0.0 5.342131669358 3.497509947792669E-5 34 8.743774869481672E-5 0.0 0.0 5.4743375453845635 3.497509947792669E-5 35 8.743774869481672E-5 0.0 0.0 5.6371641210040515 3.497509947792669E-5 36 8.743774869481672E-5 0.0 0.0 5.771853229093547 3.497509947792669E-5 37 8.743774869481672E-5 0.0 0.0 5.907486664868946 3.497509947792669E-5 38 8.743774869481672E-5 0.0 0.0 6.063003444697547 3.497509947792669E-5 39 8.743774869481672E-5 0.0 0.0 6.286756643607584 3.497509947792669E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACGT 20 7.0356415E-4 45.000004 16 GTATCGA 45 3.8562575E-10 45.0 13 CGTTTTT 30240 0.0 42.96131 1 CGTAATC 70 0.0 41.785713 12 CACGACG 1035 0.0 41.086956 26 GTCGAAC 45 1.9306754E-8 40.0 38 TAACGGG 1885 0.0 39.628647 3 CGGTCTA 1065 0.0 39.507046 31 TCACGAC 1115 0.0 38.94619 25 TACGGGA 1445 0.0 38.615917 4 TACCGAT 70 0.0 38.571426 21 TAACGCC 440 0.0 38.352272 12 CGACGGT 1100 0.0 38.25 28 ACGGGTA 500 0.0 38.25 5 CGCATCG 390 0.0 38.076923 21 TACGCGG 390 0.0 38.076923 2 TTAGACG 255 0.0 37.941177 1 CGGGTAT 635 0.0 37.913387 6 TCTAGCG 220 0.0 37.840908 1 CTAACGG 435 0.0 37.75862 2 >>END_MODULE