##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546805_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3713058 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.58275739296289 31.0 31.0 33.0 30.0 34.0 2 31.964217364770494 31.0 31.0 34.0 30.0 34.0 3 31.981393773003276 33.0 31.0 34.0 30.0 34.0 4 35.73487971370229 37.0 35.0 37.0 33.0 37.0 5 35.68461602269612 37.0 35.0 37.0 33.0 37.0 6 35.74707612970226 37.0 35.0 37.0 33.0 37.0 7 36.0734865978393 37.0 35.0 37.0 35.0 37.0 8 35.95884712816228 37.0 35.0 37.0 35.0 37.0 9 37.72487340623282 39.0 38.0 39.0 35.0 39.0 10 37.40466106373776 39.0 37.0 39.0 35.0 39.0 11 37.134220095673165 39.0 37.0 39.0 33.0 39.0 12 36.620035560985045 39.0 35.0 39.0 33.0 39.0 13 36.43255559164441 39.0 35.0 39.0 32.0 39.0 14 37.4430305155481 40.0 35.0 41.0 32.0 41.0 15 37.62737479457633 40.0 35.0 41.0 33.0 41.0 16 37.70271942964532 40.0 35.0 41.0 33.0 41.0 17 37.616928687890145 40.0 35.0 41.0 33.0 41.0 18 37.46398574975128 39.0 36.0 41.0 33.0 41.0 19 37.36994951331221 39.0 35.0 41.0 33.0 41.0 20 37.2180593462316 39.0 35.0 41.0 32.0 41.0 21 37.096491624962496 39.0 35.0 41.0 32.0 41.0 22 37.07851641423323 39.0 35.0 41.0 32.0 41.0 23 36.96119559672916 38.0 35.0 41.0 32.0 41.0 24 36.91432856691169 38.0 35.0 41.0 32.0 41.0 25 36.81629131567565 38.0 35.0 41.0 32.0 41.0 26 36.7763331464254 38.0 35.0 41.0 32.0 41.0 27 36.67445431770794 38.0 35.0 41.0 31.0 41.0 28 36.6410522001003 38.0 35.0 41.0 31.0 41.0 29 36.53686395418547 38.0 35.0 40.0 31.0 41.0 30 36.50416018279273 38.0 35.0 41.0 31.0 41.0 31 36.338424823959116 38.0 35.0 41.0 31.0 41.0 32 36.08187833316905 38.0 35.0 41.0 30.0 41.0 33 35.90726269290703 38.0 35.0 41.0 29.0 41.0 34 35.627985073219975 38.0 35.0 41.0 28.0 41.0 35 35.44699571081303 38.0 35.0 41.0 27.0 41.0 36 35.32055491726766 38.0 35.0 41.0 26.0 41.0 37 35.044177063757154 38.0 34.0 40.0 24.0 41.0 38 35.12218823406475 38.0 34.0 40.0 25.0 41.0 39 35.014873454710376 38.0 34.0 40.0 24.0 41.0 40 34.891644030338334 38.0 34.0 40.0 24.0 41.0 41 34.802222319177346 38.0 34.0 40.0 23.0 41.0 42 34.819186234095994 38.0 34.0 40.0 23.0 41.0 43 34.714723012675805 37.0 34.0 40.0 23.0 41.0 44 34.56781687762486 37.0 34.0 40.0 23.0 41.0 45 34.55865758089424 37.0 34.0 40.0 23.0 41.0 46 34.3886909388434 37.0 34.0 40.0 23.0 41.0 47 34.28323177284061 37.0 34.0 40.0 23.0 41.0 48 34.14630716783848 36.0 33.0 40.0 23.0 41.0 49 34.200133151704065 36.0 33.0 40.0 23.0 41.0 50 34.07017127122711 36.0 33.0 40.0 23.0 41.0 51 33.483513319748845 35.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 5.0 11 10.0 12 14.0 13 20.0 14 53.0 15 106.0 16 305.0 17 790.0 18 1672.0 19 3486.0 20 5968.0 21 9419.0 22 14790.0 23 21277.0 24 30871.0 25 46081.0 26 64533.0 27 74601.0 28 76399.0 29 77640.0 30 85352.0 31 99872.0 32 123432.0 33 159337.0 34 274466.0 35 429749.0 36 255405.0 37 330311.0 38 526983.0 39 999883.0 40 227.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.816147229588122 23.411592277847532 28.333195980240543 16.439064512323803 2 33.92737199365052 24.42908244363541 29.17797136484267 12.465574197871405 3 28.056119780515143 23.97829497950207 34.56442102439553 13.401164215587261 4 25.515006768006316 26.80992324924631 33.456520205178585 14.218549777568787 5 22.537730355949193 30.71282484679744 32.17730506768275 14.572139729570614 6 20.70342019973833 38.971300744561496 29.806860005957354 10.518419049742826 7 84.55348664093046 3.947904934423324 9.698205629968614 1.8004027946775945 8 85.77700644589984 3.0789177007199995 9.350029005741359 1.7940468476387927 9 80.94500543756655 5.413543230404696 10.913726637181536 2.727724694847212 10 43.54634374146593 29.362832468547488 16.83149037801187 10.259333411974712 11 35.04324467864494 22.568378948026126 27.236606592194356 15.15176978113458 12 31.873970188453832 22.02876981722343 29.778123584387856 16.319136409934885 13 23.25455190842696 29.277538891124244 30.614065279885207 16.853843920563587 14 17.679443736133397 31.556873067967157 33.17152600363366 17.59215719226578 15 17.124752697103034 24.16175562030003 41.737915217052894 16.975576465544034 16 21.174675967894927 22.083172414758938 38.70774439828303 18.0344072190631 17 21.693385883010716 21.75689148944078 30.58847989985613 25.961242727692373 18 23.410514998688413 23.503268734288557 33.729879791805025 19.356336475218 19 26.16886135363358 24.788732090907278 29.21066678732193 19.831739768137208 20 27.31971867932039 25.027322492673154 29.47505802494871 18.17790080305775 21 24.340206913008092 24.624231563309813 32.26992414338801 18.765637380294088 22 23.47116581534681 22.597411621364387 32.122417694525645 21.80900486876316 23 20.87279541553081 26.363202513938646 31.211228049763832 21.55277402076671 24 20.60686905510229 25.169900389382555 35.43734032702963 18.785890228485524 25 20.56275447353637 25.977778962784853 33.206268256515244 20.25319830716353 26 19.473328991898324 29.072290279333103 29.935891117240832 21.518489611527748 27 19.477045604997283 27.90820935196811 33.017959859501254 19.596785183533356 28 17.737239763020128 26.531958294214636 36.36283085262875 19.367971090136486 29 19.01914809841376 25.555593260326127 35.29144979690595 20.133808844354167 30 21.331204629714914 25.694481475915538 33.82204102386766 19.15227287050189 31 25.757583102660934 24.885444827417185 29.936268164946522 19.42070390497536 32 26.64838523933642 25.129017645293988 29.630159291882862 18.592437823486733 33 25.100335087682446 25.844438734864898 29.056562003609965 19.99866417384269 34 20.567494501836492 27.147731061567043 31.531799395538663 20.7529750410578 35 21.11281321218252 27.07525710613731 30.877244578457976 20.934685103222193 36 25.58144796014498 26.940651075205395 28.283048635383558 19.194852329266066 37 21.992815625287836 29.05456903716559 29.3565842494246 19.596031088121972 38 22.048941869477932 29.780116550832226 26.871193501421196 21.29974807826864 39 21.21329642574934 28.34124864195496 28.35759635319459 22.08785857910111 40 23.373402731656764 25.73094737545172 28.243620218159805 22.652029674731715 41 19.77065803981516 25.67226259325871 29.033535161583796 25.523544205342336 42 22.2754398126827 26.27017945854872 28.427754158432215 23.026626570336365 43 22.593560348370534 26.55288444188052 28.332253360976317 22.52130184877263 44 21.329050071396676 28.53626310173447 28.482937783358086 21.65174904351077 45 20.39362164555469 30.29826089438948 26.817787387107877 22.49033007294796 46 22.184113471968388 28.774799639542394 28.188032613549264 20.853054274939957 47 21.512295256362815 27.663990166595838 29.286291784292086 21.537422792749265 48 21.93515425829599 26.41394236233315 30.56504907814529 21.085854301225567 49 22.03385996125027 25.36865839424 30.31708634769508 22.280395296814646 50 20.178327405604758 29.053006982384872 29.51949579026237 21.249169821748005 51 19.83594115685777 29.77192922922292 27.998054433838632 22.394075180080677 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1999.0 1 3898.5 2 5798.0 3 37235.5 4 68673.0 5 47045.5 6 25418.0 7 25393.0 8 25368.0 9 25923.0 10 26478.0 11 25971.5 12 25465.0 13 24578.0 14 23691.0 15 22583.5 16 21476.0 17 20506.5 18 19537.0 19 18940.5 20 18344.0 21 18611.5 22 18879.0 23 20330.5 24 21782.0 25 26588.0 26 34982.5 27 38571.0 28 43932.5 29 49294.0 30 56561.5 31 63829.0 32 70634.0 33 77439.0 34 91089.0 35 104739.0 36 113719.5 37 122700.0 38 140549.5 39 158399.0 40 183455.0 41 208511.0 42 237708.5 43 266906.0 44 276944.5 45 286983.0 46 286564.0 47 286145.0 48 282250.0 49 278355.0 50 269757.5 51 261160.0 52 251908.5 53 242657.0 54 224589.5 55 206522.0 56 191973.5 57 177425.0 58 164228.0 59 151031.0 60 136820.0 61 122609.0 62 108335.5 63 94062.0 64 80577.0 65 67092.0 66 55879.0 67 44666.0 68 36211.5 69 27757.0 70 23033.5 71 18310.0 72 14258.5 73 10207.0 74 8369.5 75 5134.0 76 3736.0 77 2758.0 78 1780.0 79 1158.5 80 537.0 81 440.5 82 344.0 83 271.0 84 198.0 85 182.0 86 166.0 87 114.0 88 62.0 89 39.0 90 16.0 91 12.5 92 9.0 93 7.0 94 5.0 95 3.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3713058.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.8531630510351 #Duplication Level Percentage of deduplicated Percentage of total 1 82.17045580408275 16.31343457056328 2 6.286840866910766 2.496273536133806 3 2.0410350883239037 1.2156300720413489 4 1.0967915602020148 0.8709912671075913 5 0.701588825615588 0.696437867486525 6 0.5172234055764737 0.6161112362832833 7 0.36642750091939785 0.5092321445495285 8 0.3236132985463841 0.5139798065219731 9 0.2578679617123711 0.4607545220562402 >10 3.4222617097253556 16.94309079998936 >50 1.6427350182433755 23.652627696937383 >100 1.1683515357902294 33.64027796646793 >500 0.003159164573794208 0.43532723977367577 >1k 0.0015109047961624471 0.4869753099397583 >5k 0.0 0.0 >10k+ 1.373549814693134E-4 1.1488559641483937 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 42130 1.134644274342065 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.693197897797449E-5 0.0 0.0 0.01475872447993002 0.0 2 2.693197897797449E-5 0.0 0.0 0.04532652061993107 0.0 3 2.693197897797449E-5 0.0 0.0 0.07982638569071639 0.0 4 2.693197897797449E-5 0.0 0.0 0.11631921720587182 0.0 5 2.693197897797449E-5 0.0 0.0 0.21217013038848304 0.0 6 2.693197897797449E-5 0.0 0.0 0.37144585406422415 0.0 7 2.693197897797449E-5 0.0 0.0 0.5052977895847574 0.0 8 2.693197897797449E-5 0.0 0.0 0.7900765352978596 0.0 9 2.693197897797449E-5 0.0 0.0 0.9731062644321742 0.0 10 2.693197897797449E-5 0.0 0.0 1.193948492051565 0.0 11 2.693197897797449E-5 0.0 0.0 1.3704068183152538 0.0 12 2.693197897797449E-5 0.0 0.0 1.5009999843794521 0.0 13 2.693197897797449E-5 0.0 0.0 1.5761940696859569 0.0 14 2.693197897797449E-5 0.0 0.0 1.6048766272974997 0.0 15 2.693197897797449E-5 0.0 0.0 1.6410462750649195 0.0 16 2.693197897797449E-5 0.0 0.0 1.6995963973630361 0.0 17 2.693197897797449E-5 0.0 0.0 1.769457950831902 0.0 18 2.693197897797449E-5 0.0 0.0 1.8703720760623723 0.0 19 2.693197897797449E-5 0.0 0.0 1.9258519527569997 0.0 20 2.693197897797449E-5 0.0 0.0 1.9865297013943763 0.0 21 2.693197897797449E-5 0.0 0.0 2.065171080010062 0.0 22 2.693197897797449E-5 0.0 0.0 2.1542351344902233 0.0 23 2.693197897797449E-5 0.0 0.0 2.2498167278830548 0.0 24 2.693197897797449E-5 0.0 0.0 2.3231525066400796 0.0 25 2.693197897797449E-5 0.0 0.0 2.386119473490584 0.0 26 2.693197897797449E-5 0.0 0.0 2.4537187407252996 0.0 27 2.693197897797449E-5 0.0 0.0 2.5323870513199633 0.0 28 2.693197897797449E-5 0.0 0.0 2.606880905173041 0.0 29 2.693197897797449E-5 0.0 0.0 2.703512845746013 0.0 30 2.693197897797449E-5 0.0 0.0 2.813664639765929 0.0 31 2.693197897797449E-5 0.0 0.0 2.9059335997444693 0.0 32 2.693197897797449E-5 0.0 0.0 3.0006803017889836 0.0 33 2.693197897797449E-5 0.0 0.0 3.091117887197022 0.0 34 2.693197897797449E-5 0.0 0.0 3.1928399717968317 0.0 35 2.693197897797449E-5 0.0 0.0 3.302264602384342 0.0 36 2.693197897797449E-5 0.0 0.0 3.3997045023266534 0.0 37 2.693197897797449E-5 0.0 0.0 3.5099640242624814 0.0 38 2.693197897797449E-5 0.0 0.0 3.6626414130886187 0.0 39 2.693197897797449E-5 0.0 0.0 3.955499752495113 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCGAA 20 7.0353213E-4 45.000004 22 CGTTTTT 23665 0.0 43.58335 1 AGTACGG 535 0.0 40.79439 2 TCGATAG 145 0.0 40.344826 1 TACGGGA 1445 0.0 39.394463 4 AGGGCGA 2650 0.0 39.226414 6 GGGCGAT 4845 0.0 38.916405 7 TAGGGAC 3245 0.0 37.996918 5 CGTAAGG 610 0.0 37.991802 2 GACCGAT 1380 0.0 37.989132 9 TAACGGG 1215 0.0 37.59259 3 TTACGGG 1130 0.0 37.433628 3 ATAGGGA 4195 0.0 37.276516 4 GCGCGAC 405 0.0 37.22222 9 CATACGA 370 0.0 37.094597 18 TATCGCG 195 0.0 36.923077 1 TTAGGGA 4425 0.0 36.864403 4 AGGGATT 5565 0.0 36.792454 6 GTTTTTT 29465 0.0 36.66129 2 TAAGGGA 3850 0.0 36.642857 4 >>END_MODULE