##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546802_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5653096 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.5565960670047 31.0 31.0 33.0 30.0 34.0 2 31.94391144250867 31.0 31.0 34.0 30.0 34.0 3 31.99807079165116 33.0 31.0 34.0 30.0 34.0 4 35.75686809493418 37.0 35.0 37.0 35.0 37.0 5 35.70696941994263 37.0 35.0 37.0 33.0 37.0 6 35.76649573967964 37.0 35.0 37.0 33.0 37.0 7 36.098020093768085 37.0 35.0 37.0 35.0 37.0 8 35.99272699419929 37.0 35.0 37.0 35.0 37.0 9 37.8019028864891 39.0 38.0 39.0 35.0 39.0 10 37.28970160775617 39.0 37.0 39.0 34.0 39.0 11 37.134584659450326 39.0 37.0 39.0 34.0 39.0 12 36.72139921204239 39.0 35.0 39.0 33.0 39.0 13 36.5739062276671 39.0 35.0 39.0 33.0 39.0 14 37.65566036734561 40.0 36.0 41.0 33.0 41.0 15 37.79914209841828 40.0 36.0 41.0 33.0 41.0 16 37.84258077343813 40.0 35.0 41.0 33.0 41.0 17 37.73392562234924 40.0 35.0 41.0 33.0 41.0 18 37.62581813576136 39.0 36.0 41.0 33.0 41.0 19 37.545204256216415 39.0 36.0 41.0 33.0 41.0 20 37.43135973632855 39.0 35.0 41.0 33.0 41.0 21 37.32195667648312 39.0 35.0 41.0 33.0 41.0 22 37.279403357027725 39.0 35.0 41.0 33.0 41.0 23 37.16430288818729 39.0 35.0 41.0 32.0 41.0 24 37.14688376068618 39.0 35.0 41.0 32.0 41.0 25 37.05064375344059 39.0 35.0 41.0 32.0 41.0 26 37.023476693125325 39.0 35.0 41.0 32.0 41.0 27 36.94107865849085 39.0 35.0 41.0 32.0 41.0 28 36.92394503825868 39.0 35.0 41.0 32.0 41.0 29 36.846559124416075 38.0 35.0 41.0 32.0 41.0 30 36.82088965055608 39.0 35.0 41.0 32.0 41.0 31 36.68304429997297 39.0 35.0 41.0 31.0 41.0 32 36.441780751644764 39.0 35.0 41.0 30.0 41.0 33 36.29491503416889 39.0 35.0 41.0 30.0 41.0 34 36.037258167913656 39.0 35.0 41.0 30.0 41.0 35 35.87447745447804 38.0 35.0 41.0 29.0 41.0 36 35.75833826278556 38.0 35.0 41.0 28.0 41.0 37 35.49869628960838 38.0 35.0 41.0 27.0 41.0 38 35.60214845104346 38.0 35.0 41.0 27.0 41.0 39 35.508774307034585 38.0 35.0 40.0 27.0 41.0 40 35.41581869474709 38.0 35.0 40.0 26.0 41.0 41 35.3528659339944 38.0 35.0 40.0 26.0 41.0 42 35.366812627982966 38.0 35.0 40.0 26.0 41.0 43 35.27209797958499 38.0 35.0 40.0 26.0 41.0 44 35.141760019642334 38.0 34.0 40.0 26.0 41.0 45 35.12100360581175 38.0 34.0 40.0 26.0 41.0 46 34.955622016679 38.0 34.0 40.0 24.0 41.0 47 34.85125867312354 38.0 34.0 40.0 24.0 41.0 48 34.732825694097535 37.0 34.0 40.0 24.0 41.0 49 34.785401486194466 37.0 34.0 40.0 24.0 41.0 50 34.652353683715965 37.0 34.0 40.0 24.0 41.0 51 34.065030914033656 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 8.0 12 6.0 13 15.0 14 25.0 15 97.0 16 254.0 17 691.0 18 1704.0 19 3540.0 20 6586.0 21 10837.0 22 17243.0 23 26303.0 24 39726.0 25 61084.0 26 86913.0 27 101108.0 28 103964.0 29 106926.0 30 118879.0 31 142344.0 32 178269.0 33 233813.0 34 395570.0 35 630624.0 36 385011.0 37 510110.0 38 838914.0 39 1652261.0 40 267.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.585134234408894 23.30404436790035 30.451101484920827 15.659719912769923 2 31.77736588941705 24.978631178384376 30.552267288579564 12.691735643619001 3 27.484337785878747 24.454741260364234 34.9398276625764 13.121093291180621 4 25.27268243808349 26.528366049329428 33.93039849314429 14.268553019442798 5 22.654276523872934 31.563536157885874 32.532350414710805 13.249836903530385 6 20.508797303283018 40.0178415508953 29.000675028338453 10.472686117483233 7 87.7009164535681 3.051336824989351 7.983253778106722 1.2644929433358287 8 89.14895483819839 2.0970632729392884 7.592494449059418 1.1614874398028974 9 84.5922128334633 3.458122770248374 9.616217378937135 2.3334470173512 10 38.17159659061159 22.566324718349026 25.07174829509352 14.19033039594587 11 34.10145520260049 21.169992513836668 26.16716574422228 18.561386539340567 12 31.795709819893382 23.228422089417904 27.41879847786063 17.557069612828087 13 23.155771633809156 30.169627404169326 28.85247305193473 17.82212791008679 14 18.541857417599136 32.37919540018425 31.25137093019471 17.827576252021903 15 18.386791945510918 24.991526766925592 40.33800239727045 16.283678890293036 16 20.94747727616867 22.72991649177725 38.69426593852289 17.628340293531192 17 21.214888266535716 22.151967700530825 31.45016465313874 25.182979379794716 18 22.651233943311773 24.174753091049578 33.5402229150186 19.63379005062005 19 25.342060350646793 24.69844842542918 30.338437557048387 19.62105366687564 20 26.681432616746648 25.342431828506008 29.614497967131637 18.361637587615707 21 23.70578882792721 25.857335520217596 32.02289506493433 18.413980586920868 22 23.297145493372128 22.61932222626327 32.05183495910913 22.031697321255468 23 20.33059406739245 26.528100708001425 31.98042276303109 21.160882461575035 24 20.973445347469777 25.09688496356687 35.64568866334483 18.28398102561853 25 19.23517661826369 26.77462049114326 34.36304637317321 19.627156517419834 26 18.947511239858656 30.964130097914488 29.957690440777938 20.130668221448918 27 19.15042659809775 29.361114688305314 32.404968887844824 19.08348982575212 28 17.433367485710484 27.526703951250788 36.84303256127262 18.19689600176611 29 18.627120430999224 25.452283138301564 36.2736100713662 19.64698635933301 30 19.84944179260356 27.212982054435304 33.780569089928775 19.157007063032363 31 24.837133492868332 25.893068152389414 29.69737290857965 19.572425446162597 32 24.841166681054062 26.554334120630536 30.274737948904455 18.329761249410943 33 24.051139411041312 26.971521445947495 29.911644875657515 19.065694267353678 34 20.432626652722686 27.58297400221047 31.26189613620572 20.722503208861127 35 20.51440485001493 27.470946893525245 31.58460425932976 20.430043997130067 36 24.968565897341914 26.471795278198 29.648532414804208 18.91110640965588 37 20.80256553223225 29.780424744246336 30.041998225397197 19.375011498124213 38 20.833840430093527 30.32322465424256 27.69240076588121 21.150534149782704 39 20.99147086835249 29.346467846999236 29.376504485329807 20.285556799318464 40 22.146696252814387 27.209957163296007 28.531127014294466 22.112219569595137 41 19.535313039085132 26.426528047639735 29.629834695890533 24.408324217384596 42 21.912930542838826 27.359875013620854 27.92835996416831 22.79883447937201 43 21.893312973988056 27.73437776397217 28.290586255743754 22.08172300629602 44 21.079900288266817 29.19647923898692 29.158730012722234 20.564890460024028 45 20.144731311833375 31.311072728996642 27.87005562969389 20.674140329476096 46 22.11193653884526 29.358461275025228 28.914120687142052 19.615481498987457 47 21.63713476650671 27.881482996220125 29.190305630755255 21.291076606517915 48 22.313578258709917 26.371319361992086 30.543192615161672 20.771909764136325 49 21.442391921170277 26.173144768813405 31.095137956263258 21.289325353753057 50 20.133056293400998 29.83766771340872 29.17162560126345 20.85765039192683 51 19.88230873843289 30.990788056668418 28.00817463563329 21.118728569265407 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2919.0 1 4953.0 2 6987.0 3 44219.0 4 81451.0 5 58990.5 6 36530.0 7 36396.5 8 36263.0 9 37087.0 10 37911.0 11 37125.0 12 36339.0 13 34699.0 14 33059.0 15 30733.0 16 28407.0 17 27322.0 18 26237.0 19 25070.5 20 23904.0 21 23812.0 22 23720.0 23 26593.0 24 29466.0 25 33397.5 26 44935.5 27 52542.0 28 65767.5 29 78993.0 30 94028.0 31 109063.0 32 122312.0 33 135561.0 34 153319.0 35 171077.0 36 194840.5 37 218604.0 38 241313.5 39 264023.0 40 322386.0 41 380749.0 42 422823.5 43 464898.0 44 472356.5 45 479815.0 46 471364.0 47 462913.0 48 457144.5 49 451376.0 50 434313.0 51 417250.0 52 395090.0 53 372930.0 54 340098.5 55 307267.0 56 275504.0 57 243741.0 58 216514.0 59 189287.0 60 167351.5 61 145416.0 62 126495.5 63 107575.0 64 85249.0 65 62923.0 66 51183.5 67 39444.0 68 30393.5 69 21343.0 70 18523.0 71 15703.0 72 12847.5 73 9992.0 74 7975.5 75 4182.5 76 2406.0 77 1745.0 78 1084.0 79 731.0 80 378.0 81 264.0 82 150.0 83 104.5 84 59.0 85 45.0 86 31.0 87 20.0 88 9.0 89 8.5 90 8.0 91 6.0 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5653096.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.040364836771705 #Duplication Level Percentage of deduplicated Percentage of total 1 82.49283853315197 14.057080650258087 2 7.056924154071814 2.405051244216205 3 1.9879356578277811 1.0162544664423945 4 1.0277888209150357 0.7005558593419049 5 0.6286998028593404 0.5356637006764803 6 0.4506177008463196 0.4607214014597121 7 0.3427926819280628 0.408891865440074 8 0.25202625627337805 0.34356954842752685 9 0.2127756865309712 0.3263197794194088 >10 2.583398799734131 10.743646933956882 >50 1.2428787997642088 15.523909735857307 >100 1.711874525702373 51.424884036671095 >500 0.00808378544870857 0.8550737631389418 >1k 0.0011548264926713962 0.30017119634486256 >5k 1.0498422660649057E-4 0.10132723380995898 >10k+ 1.0498422660649057E-4 0.7968785845393385 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 44544 0.7879576076542836 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5664 0.10019288545604038 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.30682656017163E-5 0.0 0.0 0.013213998134827359 0.0 2 5.30682656017163E-5 0.0 0.0 0.04540874593320191 0.0 3 5.30682656017163E-5 0.0 0.0 0.07107609706256536 0.0 4 5.30682656017163E-5 0.0 0.0 0.10397842173562946 0.0 5 5.30682656017163E-5 0.0 0.0 0.18984287547920645 0.0 6 5.30682656017163E-5 0.0 0.0 0.31487170923685004 0.0 7 5.30682656017163E-5 0.0 0.0 0.40959856333591366 0.0 8 5.30682656017163E-5 0.0 0.0 0.60943596217011 0.0 9 5.30682656017163E-5 0.0 0.0 0.7067631612836577 0.0 10 5.30682656017163E-5 0.0 0.0 0.8646943197143654 0.0 11 5.30682656017163E-5 0.0 0.0 0.991279822596326 0.0 12 5.30682656017163E-5 0.0 0.0 1.09580661640984 0.0 13 5.30682656017163E-5 0.0 0.0 1.140047860499804 0.0 14 5.30682656017163E-5 0.0 0.0 1.1605322110220664 0.0 15 5.30682656017163E-5 0.0 0.0 1.1873670639946676 0.0 16 5.30682656017163E-5 0.0 0.0 1.2469450368435278 0.0 17 7.075768746895507E-5 0.0 0.0 1.3186402636714465 0.0 18 7.075768746895507E-5 0.0 0.0 1.4174887530655769 0.0 19 7.075768746895507E-5 0.0 0.0 1.4688588341680382 0.0 20 7.075768746895507E-5 0.0 0.0 1.524704339002911 0.0 21 7.075768746895507E-5 0.0 0.0 1.6028385153905047 0.0 22 7.075768746895507E-5 0.0 0.0 1.6900827440397261 0.0 23 7.075768746895507E-5 0.0 0.0 1.7802103484533076 0.0 24 7.075768746895507E-5 0.0 0.0 1.8522593637185711 0.0 25 7.075768746895507E-5 0.0 0.0 1.9197975764076889 0.0 26 7.075768746895507E-5 0.0 0.0 1.9882202601901684 0.0 27 7.075768746895507E-5 0.0 0.0 2.0565544968633116 0.0 28 7.075768746895507E-5 0.0 0.0 2.131593024424139 0.0 29 7.075768746895507E-5 0.0 0.0 2.215653157137257 0.0 30 7.075768746895507E-5 0.0 0.0 2.314307062890848 0.0 31 7.075768746895507E-5 0.0 0.0 2.4061505412255513 0.0 32 7.075768746895507E-5 0.0 0.0 2.489308513423441 0.0 33 7.075768746895507E-5 0.0 0.0 2.5755621344480972 0.0 34 7.075768746895507E-5 0.0 0.0 2.6644691687528392 0.0 35 7.075768746895507E-5 0.0 0.0 2.773966690111047 0.0 36 7.075768746895507E-5 0.0 0.0 2.8721606708960894 0.0 37 7.075768746895507E-5 0.0 0.0 2.975413826335162 0.0 38 7.075768746895507E-5 0.0 0.0 3.0938975740019274 0.0 39 7.075768746895507E-5 0.0 0.0 3.243903871436112 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 32170 0.0 43.566208 1 TAGTACG 260 0.0 38.94231 1 CGAGGGT 2200 0.0 38.659092 4 GGGCGAT 7965 0.0 38.615818 7 TAGGGCG 2040 0.0 38.382355 5 ATAGGGC 3015 0.0 38.35821 4 CGGGTCA 1365 0.0 38.24176 6 GCGCGAC 510 0.0 37.941177 9 AAGGGTC 4615 0.0 37.589382 5 TACGGGT 1270 0.0 37.559055 4 ACGGGAT 1795 0.0 37.35376 5 TAGGGTC 4765 0.0 37.35047 5 TCGATAG 280 0.0 36.964283 1 GCGGGTC 1825 0.0 36.863014 5 GTTTTTT 39595 0.0 36.85693 2 GGCGATA 2040 0.0 36.838234 8 ACCGCTC 245 0.0 36.734695 18 AGGGCGA 4630 0.0 36.690063 6 GCGATAT 595 0.0 36.68067 9 GTTACGG 825 0.0 36.545452 2 >>END_MODULE