##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546795_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 167798 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.575429981287023 31.0 31.0 33.0 30.0 34.0 2 31.957234293614942 31.0 31.0 34.0 30.0 34.0 3 32.00654358216427 33.0 31.0 34.0 30.0 34.0 4 35.7484534976579 37.0 35.0 37.0 35.0 37.0 5 35.70000238381864 37.0 35.0 37.0 33.0 37.0 6 35.75701736611879 37.0 35.0 37.0 33.0 37.0 7 36.03821261278442 37.0 35.0 37.0 35.0 37.0 8 35.90145889700712 37.0 35.0 37.0 35.0 37.0 9 37.667183160705136 39.0 38.0 39.0 35.0 39.0 10 37.389098797363495 39.0 37.0 39.0 35.0 39.0 11 37.09723596228799 39.0 37.0 39.0 33.0 39.0 12 36.55761093695992 39.0 35.0 39.0 33.0 39.0 13 36.3601413604453 39.0 35.0 39.0 32.0 39.0 14 37.42695383735205 40.0 35.0 41.0 33.0 41.0 15 37.58371971060442 40.0 35.0 41.0 33.0 41.0 16 37.64526990786541 40.0 35.0 41.0 33.0 41.0 17 37.51119798805707 39.0 35.0 41.0 33.0 41.0 18 37.38835981358538 39.0 35.0 41.0 32.0 41.0 19 37.313376798293184 39.0 35.0 41.0 32.0 41.0 20 37.18266010321935 39.0 35.0 41.0 32.0 41.0 21 37.06391613726028 39.0 35.0 41.0 32.0 41.0 22 37.02039356845731 39.0 35.0 41.0 32.0 41.0 23 36.867692105984574 38.0 35.0 41.0 32.0 41.0 24 36.862698005935705 38.0 35.0 41.0 32.0 41.0 25 36.775086711403 38.0 35.0 41.0 32.0 41.0 26 36.71189763882764 38.0 35.0 41.0 32.0 41.0 27 36.59218822631974 38.0 35.0 41.0 31.0 41.0 28 36.530423485381235 38.0 35.0 40.0 31.0 41.0 29 36.458318931095725 38.0 35.0 40.0 31.0 41.0 30 36.42992169155771 38.0 35.0 40.0 31.0 41.0 31 36.28500339694156 38.0 35.0 41.0 30.0 41.0 32 36.06597814038308 38.0 35.0 41.0 30.0 41.0 33 35.93110764133065 38.0 35.0 41.0 30.0 41.0 34 35.69659352316476 38.0 35.0 41.0 29.0 41.0 35 35.56838579720855 38.0 35.0 41.0 28.0 41.0 36 35.456584703035794 38.0 35.0 40.0 27.0 41.0 37 35.18101526835839 38.0 34.0 40.0 26.0 41.0 38 35.276701748530975 38.0 34.0 40.0 27.0 41.0 39 35.15868484725682 38.0 34.0 40.0 26.0 41.0 40 35.03665717112242 38.0 34.0 40.0 25.0 41.0 41 34.95427239895589 37.0 34.0 40.0 25.0 41.0 42 34.95673965124733 37.0 34.0 40.0 25.0 41.0 43 34.86201861762357 37.0 34.0 40.0 25.0 41.0 44 34.72447824169537 37.0 34.0 40.0 24.0 41.0 45 34.71078320361387 37.0 34.0 40.0 24.0 41.0 46 34.53808150275927 37.0 34.0 40.0 24.0 41.0 47 34.395588743608386 36.0 34.0 40.0 23.0 41.0 48 34.259436942037446 36.0 33.0 40.0 23.0 41.0 49 34.34529017032384 36.0 34.0 40.0 24.0 41.0 50 34.20932907424403 36.0 34.0 40.0 24.0 41.0 51 33.61355916041907 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 3.0 15 6.0 16 11.0 17 29.0 18 61.0 19 148.0 20 276.0 21 448.0 22 729.0 23 1052.0 24 1325.0 25 1957.0 26 2632.0 27 3054.0 28 3182.0 29 3331.0 30 3774.0 31 4397.0 32 5660.0 33 7268.0 34 12920.0 35 20745.0 36 11806.0 37 15272.0 38 23922.0 39 43776.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.29300706802226 23.231504547134055 28.308442293710296 15.167046091133388 2 32.904444629852556 24.702916602104914 29.46936197094125 12.923276797101277 3 28.16660508468516 25.15703405284926 33.3138654811142 13.362495381351385 4 25.989582712547225 27.186855624024126 31.98488658982825 14.838675073600399 5 24.039023111121704 30.80906804610305 30.64935219728483 14.502556645490412 6 21.483569530030156 39.704883252482155 28.033707195556563 10.777840021931132 7 85.5361804073946 4.309944099452913 8.352900511329098 1.800974981823383 8 86.47421304187178 3.587647051812298 8.034064768352424 1.9040751379635037 9 82.07845147141205 5.185997449314056 9.485810319550888 3.249740759723 10 46.88196522008606 28.428825134983732 14.715908413687886 9.973301231242328 11 36.87886625585525 22.79645764550233 25.110549589387237 15.214126509255177 12 33.14759413103851 22.01039344926638 28.424653452365344 16.417358967329765 13 24.033659519183782 30.450303340921824 28.533117200443392 16.98291993945101 14 18.003194316976366 33.34664298740152 30.668422746397457 17.98173994922466 15 17.59198560173542 24.07180061740903 41.512413735562994 16.823800045292554 16 21.230288799628124 22.4025316153947 37.93072623034839 18.436453354628778 17 21.749961262947114 22.009797494606612 29.507503069166496 26.732738173279774 18 24.02233638064816 24.43712082384772 32.086198881989056 19.45434391351506 19 28.170180812643775 24.71900737791869 27.71367954326035 19.397132266177188 20 28.387704263459636 25.716039523713036 27.212481674394212 18.683774538433116 21 25.885886601747337 25.219609292125057 30.00214543677517 18.892358669352436 22 24.64808877340612 23.471674275021158 29.738137522497286 22.142099429075436 23 21.94185866339289 26.35967055626408 29.654703870129563 22.04376691021347 24 21.47641807411292 24.912096687684002 34.29123112313615 19.320254115066927 25 21.597992824705898 26.18445988629185 31.974755360612168 20.242791928390087 26 20.103934492663797 29.860308227750032 28.745873013981093 21.28988426560507 27 19.93885505190765 28.604631759615728 31.317417370886425 20.139095817590196 28 18.55147260396429 27.016412591330052 35.08265891131003 19.349455893395632 29 19.64147367668268 26.134995649530985 34.44677528933598 19.77675538445035 30 21.797637635728673 26.297691271648056 32.00276522962133 19.901905863001943 31 26.63798138237643 25.22497288406298 28.00152564392901 20.13552008963158 32 27.76910332661891 25.67313078820963 28.320361386905684 18.23740449826577 33 25.96693643547599 26.48780080811452 27.65527598660294 19.88998676980655 34 21.581902048892122 27.642760938747777 29.790581532557002 20.9847554798031 35 22.08965541901572 27.077795921286306 29.94195401613845 20.890594643559517 36 26.19816684346655 27.111765336893168 27.283996233566548 19.406071586073733 37 22.12839247190074 29.858520363770722 27.89544571449004 20.117641449838498 38 22.844729972943657 30.18689138130371 25.633201826005074 21.335176819747552 39 22.2541389051121 29.064112802298002 27.185067760044817 21.496680532545085 40 23.60457216414975 26.78339431936018 26.599244329491412 23.012789186998653 41 20.631950321219563 25.750008939319898 27.600448157904147 26.017592581556393 42 22.780962824348325 26.875767291624452 26.573618279121327 23.7696516049059 43 22.69216558004267 26.96218071729103 26.863252243769292 23.482401458897005 44 21.192147701402877 29.17019273173697 27.786386011752224 21.851273555107927 45 20.673071192743656 30.5581711343401 26.29649936232851 22.47225831058773 46 22.90194162028153 29.21608124053922 27.680306082313255 20.201671056865994 47 22.748781272720773 27.40139930154114 28.379956852882632 21.469862572855458 48 23.182040310373186 25.691605382662488 29.565906625823906 21.560447681140417 49 22.24519958521556 24.87633940809783 30.260789759115127 22.617671247571487 50 20.819080084387178 29.175556323674893 28.381744716861938 21.623618875075984 51 20.49190097617373 29.873419230264965 27.371005613892898 22.26367417966841 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 115.0 1 219.0 2 323.0 3 1366.5 4 2410.0 5 1691.5 6 973.0 7 952.0 8 931.0 9 975.5 10 1020.0 11 970.0 12 920.0 13 901.0 14 882.0 15 829.5 16 777.0 17 732.0 18 687.0 19 735.5 20 784.0 21 743.5 22 703.0 23 819.0 24 935.0 25 1053.0 26 1305.5 27 1440.0 28 1852.0 29 2264.0 30 2569.5 31 2875.0 32 3265.5 33 3656.0 34 4104.0 35 4552.0 36 5013.5 37 5475.0 38 6165.5 39 6856.0 40 8397.0 41 9938.0 42 11190.5 43 12443.0 44 12754.5 45 13066.0 46 12658.0 47 12250.0 48 12050.5 49 11851.0 50 11744.5 51 11638.0 52 11165.5 53 10693.0 54 9938.5 55 9184.0 56 8728.5 57 8273.0 58 7794.0 59 7315.0 60 6731.0 61 6147.0 62 5441.0 63 4735.0 64 4220.5 65 3706.0 66 3011.0 67 2316.0 68 1992.0 69 1668.0 70 1407.5 71 1147.0 72 966.0 73 785.0 74 601.5 75 333.5 76 249.0 77 196.0 78 143.0 79 93.5 80 44.0 81 34.0 82 24.0 83 15.0 84 6.0 85 5.5 86 5.0 87 4.0 88 3.0 89 1.5 90 0.0 91 0.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 167798.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.036257881500376 #Duplication Level Percentage of deduplicated Percentage of total 1 62.93240331178406 26.454427347167425 2 10.038845412271748 8.439909891655443 3 7.051718271520925 8.89283543308025 4 5.241295225133266 8.81297750867114 5 3.972439605307928 8.34932478337048 6 3.046671203357151 7.684239383067736 7 2.272598389474878 6.6872072372733875 8 1.6714869003062267 5.62104435094578 9 1.2050584098899852 4.559053147236558 >10 2.557559260519451 13.393485023659398 >50 0.007088578881705796 0.1907054911262351 >100 0.001417715776341159 0.09952442818150396 >500 0.0 0.0 >1k 0.001417715776341159 0.8152659745646551 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1368 0.8152659745646551 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.00893931989654227 0.0 2 0.0 0.0 0.0 0.027413914349396298 0.0 3 0.0 0.0 0.0 0.04767637278155878 0.0 4 0.0 0.0 0.0 0.0816457883884194 0.0 5 0.0 0.0 0.0 0.1632915767768388 0.0 6 0.0 0.0 0.0 0.2806946447514273 0.0 7 0.0 0.0 0.0 0.35697684120192136 0.0 8 0.0 0.0 0.0 0.5071574154638315 0.0 9 0.0 0.0 0.0 0.6144292542223387 0.0 10 0.0 0.0 0.0 0.7640138738244794 0.0 11 0.0 0.0 0.0 0.8814169417990679 0.0 12 0.0 0.0 0.0 0.9904766445368837 0.0 13 0.0 0.0 0.0 1.038748971978212 0.0 14 0.0 0.0 0.0 1.0661628863276083 0.0 15 0.0 0.0 0.0 1.0852334354402318 0.0 16 0.0 0.0 0.0 1.1346976722010989 0.0 17 0.0 0.0 0.0 1.1847578636217357 0.0 18 0.0 0.0 0.0 1.262827924051538 0.0 19 0.0 0.0 0.0 1.3051407048951715 0.0 20 0.0 0.0 0.0 1.3552008963158082 0.0 21 0.0 0.0 0.0 1.4106246796743704 0.0 22 0.0 0.0 0.0 1.4684322816720103 0.0 23 0.0 0.0 0.0 1.5280277476489588 0.0 24 0.0 0.0 0.0 1.5697445738328228 0.0 25 0.0 0.0 0.0 1.620400719913229 0.0 26 0.0 0.0 0.0 1.6633094554166319 0.0 27 0.0 0.0 0.0 1.7240968307131193 0.0 28 0.0 0.0 0.0 1.7735610674739866 0.0 29 0.0 0.0 0.0 1.830772714811857 0.0 30 0.0 0.0 0.0 1.909438729901429 0.0 31 0.0 0.0 0.0 1.972013969177225 0.0 32 0.0 0.0 0.0 2.0304175258346344 0.0 33 0.0 0.0 0.0 2.097164447728817 0.0 34 0.0 0.0 0.0 2.169870916220694 0.0 35 0.0 0.0 0.0 2.2556883872274995 0.0 36 0.0 0.0 0.0 2.3117081252458314 0.0 37 0.0 0.0 0.0 2.392757958974481 0.0 38 0.0 0.0 0.0 2.4791713846410564 0.0 39 0.0 0.0 0.0 2.6233924123052716 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTACG 20 7.0160505E-4 45.000004 1 GTCTCGC 20 7.0160505E-4 45.000004 31 AAGACGG 20 7.0160505E-4 45.000004 2 TACGGGA 40 6.7557266E-9 45.000004 4 ACGGGCG 20 7.0160505E-4 45.000004 5 ACGGGAC 35 1.2036435E-7 45.000004 5 CGGGATG 20 7.0160505E-4 45.000004 6 GAACGGG 40 6.7557266E-9 45.000004 3 CGGTCTA 20 7.0160505E-4 45.000004 31 GTGACGG 20 7.0160505E-4 45.000004 2 CGTTTAC 20 7.0160505E-4 45.000004 33 ACGACGG 20 7.0160505E-4 45.000004 27 TTTAGCG 25 3.8765273E-5 45.0 1 TAGACGG 25 3.8765273E-5 45.0 2 ACACAAC 25 3.8765273E-5 45.0 11 TACGAGG 25 3.8765273E-5 45.0 2 ATACGGG 25 3.8765273E-5 45.0 3 GCGTAGG 25 3.8765273E-5 45.0 2 GTACAAG 30 2.154391E-6 44.999996 1 CGTTTTT 855 0.0 43.421055 1 >>END_MODULE