##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546792_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1445329 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.67912080917217 31.0 31.0 33.0 30.0 34.0 2 32.04655133883012 33.0 31.0 34.0 30.0 34.0 3 32.092306319184075 33.0 31.0 34.0 30.0 34.0 4 35.789683179400676 37.0 35.0 37.0 35.0 37.0 5 35.72343943835625 37.0 35.0 37.0 33.0 37.0 6 35.78549451370588 37.0 35.0 37.0 35.0 37.0 7 36.10677707290174 37.0 35.0 37.0 35.0 37.0 8 35.99918980384397 37.0 35.0 37.0 35.0 37.0 9 37.79969404889821 39.0 38.0 39.0 35.0 39.0 10 37.5168871585639 39.0 37.0 39.0 35.0 39.0 11 37.1251023123455 39.0 37.0 39.0 34.0 39.0 12 35.90123079243549 37.0 35.0 39.0 33.0 39.0 13 35.47467946744305 37.0 35.0 39.0 31.0 39.0 14 36.322660100226315 38.0 35.0 41.0 31.0 41.0 15 36.645370707984135 38.0 35.0 41.0 32.0 41.0 16 36.826722497092355 38.0 35.0 41.0 33.0 41.0 17 36.71798185741793 37.0 35.0 41.0 32.0 41.0 18 36.67103060963974 37.0 35.0 40.0 32.0 41.0 19 36.59937702765253 37.0 35.0 40.0 32.0 41.0 20 36.448585062639715 36.0 35.0 40.0 32.0 41.0 21 36.27605894574869 36.0 35.0 40.0 32.0 41.0 22 36.192274561708786 36.0 35.0 40.0 31.0 41.0 23 36.13653707910102 35.0 35.0 40.0 31.0 41.0 24 36.10713616069421 35.0 35.0 40.0 31.0 41.0 25 36.018373671323275 35.0 35.0 40.0 31.0 41.0 26 35.938469372717215 35.0 35.0 40.0 31.0 41.0 27 35.84163674844966 35.0 35.0 40.0 31.0 41.0 28 35.88515832727358 36.0 35.0 40.0 31.0 41.0 29 35.85931991954773 36.0 35.0 40.0 31.0 41.0 30 35.88692401522422 36.0 35.0 40.0 31.0 41.0 31 35.720122546492874 36.0 35.0 40.0 31.0 41.0 32 35.47278647283767 35.0 34.0 40.0 30.0 41.0 33 35.37173266432764 35.0 34.0 40.0 30.0 41.0 34 35.1945508600464 35.0 34.0 40.0 29.0 41.0 35 35.1044218997889 35.0 34.0 40.0 29.0 41.0 36 34.95052129999467 35.0 34.0 40.0 29.0 41.0 37 34.660246213837816 35.0 34.0 40.0 27.0 41.0 38 34.7642944962704 35.0 34.0 40.0 28.0 41.0 39 34.725675607422254 35.0 34.0 40.0 27.0 41.0 40 34.5806117499891 35.0 34.0 40.0 27.0 41.0 41 34.586592395226276 35.0 34.0 40.0 27.0 41.0 42 34.59704607047946 35.0 34.0 40.0 27.0 41.0 43 34.45274397732281 35.0 34.0 40.0 27.0 41.0 44 34.33573324827773 35.0 34.0 40.0 27.0 41.0 45 34.28922065495122 35.0 34.0 40.0 27.0 41.0 46 34.151258986708214 35.0 34.0 39.0 26.0 41.0 47 34.04194269955145 35.0 33.0 39.0 26.0 41.0 48 33.97214129101402 35.0 34.0 39.0 25.0 41.0 49 34.05165605893191 35.0 34.0 39.0 26.0 41.0 50 33.89248191934155 35.0 34.0 39.0 26.0 41.0 51 33.294544702278856 35.0 33.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 2.0 12 3.0 13 10.0 14 27.0 15 55.0 16 143.0 17 267.0 18 614.0 19 1205.0 20 2092.0 21 3567.0 22 5343.0 23 7659.0 24 11060.0 25 15530.0 26 20752.0 27 24408.0 28 26437.0 29 29118.0 30 34464.0 31 42740.0 32 54892.0 33 75576.0 34 156246.0 35 304524.0 36 84572.0 37 102868.0 38 157922.0 39 283143.0 40 85.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.61561900439277 23.716814649121414 30.147737989066847 13.519828357418968 2 30.774792452099142 26.063546777238955 29.84905166920473 13.312609101457177 3 29.124026432736077 25.080933130103944 32.03900288446437 13.756037552695616 4 25.95713501908562 27.526604669248318 31.071749061978277 15.444511249687787 5 23.413700271702844 32.14797461339252 29.57036079674593 14.867964318158702 6 22.079401990827 38.41928031610796 27.737006591578805 11.764311101486236 7 86.40274982374255 5.043834310388846 6.679032939905031 1.8743829259635696 8 88.52593423365892 4.007945595777848 5.731290246027029 1.7348299245362127 9 85.42982255251226 4.491157376624976 6.941187784926477 3.1378322859362817 10 61.7746547671845 17.734508890363372 11.090900410909905 9.399935931542231 11 56.139190454214926 17.198022042040257 15.656435316803302 11.00635218694152 12 48.68331016675096 20.181840951091413 19.20573101349243 11.929117868665196 13 23.02257825034992 44.55546107495248 19.628195379737072 12.793765294960524 14 14.127094938245893 46.177167966601374 25.827614335559584 13.868122759593144 15 13.26867446788932 21.5436762148964 52.23606528340606 12.951584033808219 16 15.305442567055666 15.738700323594143 50.97510670580885 17.98075040354134 17 16.426017882433687 15.890499671701045 27.776720732788174 39.906761713077096 18 23.166282555736444 22.178479778652473 32.601366194132964 22.05387147147812 19 31.76605464914909 23.80973466940745 23.632543178750307 20.79166750269316 20 35.823262385242394 22.142294245808394 22.12202204480779 19.912421324141423 21 24.285404914728755 28.20513530137429 26.309165594823046 21.200294189073908 22 23.746634849228098 24.17304295423395 24.762182174439175 27.318140022098774 23 21.761273730756113 31.028298747205653 23.00452007812754 24.205907443910693 24 22.407493380399895 22.443886478441932 37.75707814622138 17.391541994936794 25 17.94691727627412 23.574701676919236 36.15571264397241 22.322668402834232 26 16.608121749442514 35.63257915671795 27.254071564328953 20.50522752951058 27 18.905038230050046 33.47251732996432 28.78029846491699 18.842145975068654 28 14.454217690228315 28.470403624365108 40.661814714850394 16.413563970556186 29 15.911740510292121 24.389533455704548 39.398918862072236 20.299807171931096 30 18.90510741844936 29.10430773893003 32.73040255886376 19.260182283756848 31 31.507151658895655 25.17246938240359 23.172232758077918 20.148146200622836 32 32.8336316506484 26.67987703837673 24.508329937336068 15.978161373638805 33 29.851542451580226 27.84763884209062 23.84419049226854 18.456628214060604 34 20.13555391194669 28.820842866918188 28.178221014039018 22.8653822070961 35 20.712170031875097 26.109211120789798 31.02892144279953 22.149697404535576 36 31.94712069016812 24.04283038671472 25.80914103294129 18.20090789017587 37 22.396354048109462 31.054659527346367 28.49870167968677 18.0502847448574 38 22.288627710369056 32.01935337905764 22.581294639490384 23.110724271082915 39 21.31058049758913 31.50839705008341 26.08333465944432 21.097687792883143 40 25.546916999520526 25.335546439599565 24.22846286208884 24.88907369879107 41 17.604019569246866 23.6719805663624 26.963341910388568 31.76065795400217 42 24.422121191784015 25.871618157526765 22.532170875973566 27.174089774715654 43 24.461143449000193 26.967354837549095 23.033579205841715 25.537922507608997 44 21.360534521897783 32.00842161196517 26.202200329475154 20.428843536661894 45 18.90303176646978 37.36713232765689 20.716113770636305 23.013722135237032 46 23.083602418549688 33.18891408115384 24.477471911239586 19.250011589056886 47 23.556989446693454 27.288596575589363 25.99062220435624 23.163791773360945 48 26.108034918001366 21.527416941056327 29.773359560349235 22.59118858059307 49 22.36618790600618 21.57840879135477 31.542022612152664 24.51338069048639 50 19.773006699512706 33.001136765400815 25.053188581976837 22.172667953109638 51 18.483819254993154 35.614797738092854 21.792339322050548 24.109043684863448 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1077.0 1 1666.5 2 2256.0 3 6690.0 4 11124.0 5 8072.0 6 5020.0 7 5288.5 8 5557.0 9 5951.5 10 6346.0 11 6345.5 12 6345.0 13 6061.0 14 5777.0 15 5580.0 16 5383.0 17 5042.5 18 4702.0 19 4436.5 20 4171.0 21 4124.0 22 4077.0 23 4185.0 24 4293.0 25 4607.5 26 7052.5 27 9183.0 28 9780.0 29 10377.0 30 12505.5 31 14634.0 32 17303.0 33 19972.0 34 22262.5 35 24553.0 36 25699.5 37 26846.0 38 33887.5 39 40929.0 40 69228.0 41 97527.0 42 124421.5 43 151316.0 44 151739.0 45 152162.0 46 142696.5 47 133231.0 48 124413.5 49 115596.0 50 109410.5 51 103225.0 52 99532.0 53 95839.0 54 88744.5 55 81650.0 56 76334.5 57 71019.0 58 66503.5 59 61988.0 60 58298.0 61 54608.0 62 47565.5 63 40523.0 64 32015.0 65 23507.0 66 20027.5 67 16548.0 68 13377.0 69 10206.0 70 8930.5 71 7655.0 72 6205.5 73 4756.0 74 3833.5 75 2373.0 76 1835.0 77 1385.5 78 936.0 79 672.5 80 409.0 81 289.5 82 170.0 83 115.0 84 60.0 85 49.0 86 38.0 87 29.0 88 20.0 89 16.0 90 12.0 91 12.5 92 13.0 93 17.5 94 22.0 95 12.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1445329.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.597504544647002 #Duplication Level Percentage of deduplicated Percentage of total 1 83.17901436587779 14.637430833227928 2 6.504481522165917 2.2892528629377438 3 1.7332203900592653 0.9150106107282832 4 0.8750485577576314 0.6159468388770689 5 0.49867597121073515 0.43877263348435847 6 0.37638317511431135 0.39740427807616574 7 0.27290742692427983 0.3361742779897554 8 0.20875433024757478 0.2938844220197151 9 0.1815268428427385 0.2874977497710462 >10 2.7337460822401756 12.538518614706884 >50 1.7440060972203373 22.861488161012794 >100 1.6894688565858063 43.360119497855834 >500 0.001975986966767025 0.2444502505837572 >1k 0.0 0.0 >5k 7.9039478670681E-4 0.7840489687286709 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6040 0.41789793188955593 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5234 0.36213208203806885 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0756519795838872E-4 0.0 0.0 0.022071099382908667 0.0 2 2.0756519795838872E-4 0.0 0.0 0.07271700768475552 0.0 3 2.0756519795838872E-4 0.0 0.0 0.10011561381526282 0.0 4 2.0756519795838872E-4 0.0 0.0 0.1561582172640278 0.0 5 2.0756519795838872E-4 0.0 0.0 0.28215029242476974 0.0 6 2.0756519795838872E-4 0.0 0.0 0.40219216524403784 0.0 7 2.0756519795838872E-4 0.0 0.0 0.49359004074504836 0.0 8 2.0756519795838872E-4 0.0 0.0 0.7187982805299001 0.0 9 2.0756519795838872E-4 0.0 0.0 0.8288770238471656 0.0 10 2.0756519795838872E-4 0.0 0.0 1.0796157829808992 0.0 11 2.0756519795838872E-4 0.0 0.0 1.2882188069290799 0.0 12 2.0756519795838872E-4 0.0 0.0 1.5054703807921934 0.0 13 2.0756519795838872E-4 0.0 0.0 1.5827538228320335 0.0 14 2.0756519795838872E-4 0.0 0.0 1.6083535305802348 0.0 15 2.0756519795838872E-4 0.0 0.0 1.6518038453528574 0.0 16 2.0756519795838872E-4 0.0 0.0 1.7355909969287269 0.0 17 2.0756519795838872E-4 0.0 0.0 1.8265045536345013 0.0 18 2.0756519795838872E-4 0.0 0.0 1.966195931860497 0.0 19 2.0756519795838872E-4 0.0 0.0 2.0350383891833626 0.0 20 2.0756519795838872E-4 0.0 0.0 2.0998679193456993 0.0 21 2.0756519795838872E-4 0.0 0.0 2.1870453024882224 0.0 22 2.0756519795838872E-4 0.0 0.0 2.2751221348218986 0.0 23 2.0756519795838872E-4 0.0 0.0 2.3783512266065374 0.0 24 2.0756519795838872E-4 0.0 0.0 2.4504455386974175 0.0 25 2.0756519795838872E-4 0.0 0.0 2.5046892437638766 0.0 26 2.0756519795838872E-4 0.0 0.0 2.562323180396989 0.0 27 2.0756519795838872E-4 0.0 0.0 2.6230014066001583 0.0 28 2.0756519795838872E-4 0.0 0.0 2.6831261256087715 0.0 29 2.0756519795838872E-4 0.0 0.0 2.74643351098608 0.0 30 2.0756519795838872E-4 0.0 0.0 2.8394919080707575 0.0 31 2.0756519795838872E-4 0.0 0.0 2.9287449431928647 0.0 32 2.0756519795838872E-4 0.0 0.0 3.001116008881023 0.0 33 2.0756519795838872E-4 0.0 0.0 3.0753551613508066 0.0 34 2.0756519795838872E-4 0.0 0.0 3.155060197366828 0.0 35 2.0756519795838872E-4 0.0 0.0 3.2657616362779684 0.0 36 2.0756519795838872E-4 0.0 0.0 3.3512093094375053 0.0 37 2.0756519795838872E-4 0.0 0.0 3.4390093881739037 0.0 38 2.0756519795838872E-4 0.0 0.0 3.522450597753176 0.0 39 2.0756519795838872E-4 0.0 0.0 3.6157857484351315 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCGT 30 2.1658907E-6 45.000004 13 CGTTATG 30 2.1658907E-6 45.000004 17 CCATACT 35 1.2122109E-7 45.000004 27 TATAGTC 35 1.2122109E-7 45.000004 43 ACGCGAG 25 3.891306E-5 45.0 1 AACGTTG 25 3.891306E-5 45.0 44 AACGTCG 40 6.8175723E-9 45.0 23 ATCTCGA 25 3.891306E-5 45.0 11 TCGTTAA 20 7.03389E-4 45.0 17 CTCGTTA 20 7.03389E-4 45.0 16 GTCGATC 20 7.03389E-4 45.0 14 ACGTTGT 20 7.03389E-4 45.0 15 CGCATTA 20 7.03389E-4 45.0 15 TAAACGG 100 0.0 45.0 2 CACGATT 25 3.891306E-5 45.0 11 CGCGAGT 20 7.03389E-4 45.0 17 TATGCGA 20 7.03389E-4 45.0 37 CCGCTAT 20 7.03389E-4 45.0 40 ATCGTTC 20 7.03389E-4 45.0 2 GTAATCG 25 3.891306E-5 45.0 32 >>END_MODULE