SRR1546718_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1546718_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3544840
Sequences flagged as poor quality	0
Sequence length	50
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24086	0.679466492140689	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	37750	43.07338	1
GAGCGAT	3845	42.283485	7
GTTTTTA	20305	40.597885	2
AGCGATA	770	39.42857	8
ATCGCGA	135	39.111115	2
CGAGATT	860	38.88372	6
TATGCGA	170	38.823532	2
AGCGATC	545	38.752293	8
GAGACCG	1315	38.64639	7
CTATCTC	2005	37.52618	6
AGCGATT	1205	37.244816	8
AGACCGA	1265	37.04348	8
AGTACGA	230	36.347824	2
AGCGATG	1910	36.282722	8
TATTTTT	23200	36.025	7
GACCGAT	2330	35.785408	9
TATCGCG	105	35.61905	1
AGAGCGA	2465	35.43205	6
TTATTTT	23630	35.388065	6
GCGTAAG	255	35.37255	1