##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546681_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1407931 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.241469929989467 31.0 31.0 33.0 30.0 34.0 2 31.629000995077174 31.0 31.0 34.0 30.0 34.0 3 31.695146992288684 31.0 31.0 34.0 30.0 34.0 4 35.48815957600195 37.0 35.0 37.0 33.0 37.0 5 35.39535460189455 37.0 35.0 37.0 33.0 37.0 6 35.46248999418295 37.0 35.0 37.0 33.0 37.0 7 35.9145291921266 37.0 35.0 37.0 35.0 37.0 8 35.89957320351637 37.0 35.0 37.0 35.0 37.0 9 37.59189619377654 39.0 37.0 39.0 35.0 39.0 10 37.004480333198146 39.0 37.0 39.0 33.0 39.0 11 36.71306548403295 39.0 35.0 39.0 32.0 39.0 12 36.21695452404983 38.0 35.0 39.0 32.0 39.0 13 36.03842659903078 38.0 35.0 39.0 31.0 39.0 14 37.064430714289266 39.0 35.0 41.0 31.0 41.0 15 37.28164590452231 39.0 35.0 41.0 32.0 41.0 16 37.362238632432984 39.0 35.0 41.0 32.0 41.0 17 37.29062361720852 39.0 35.0 41.0 32.0 41.0 18 37.17123282319943 39.0 35.0 41.0 32.0 41.0 19 37.11107788662939 38.0 35.0 41.0 32.0 41.0 20 36.93348750755541 38.0 35.0 41.0 32.0 41.0 21 36.837256939438085 38.0 35.0 41.0 31.0 41.0 22 36.72792416673828 38.0 35.0 41.0 31.0 41.0 23 36.646877581358744 38.0 35.0 40.0 31.0 41.0 24 36.52429700035016 38.0 35.0 40.0 31.0 41.0 25 36.43642337586146 38.0 35.0 40.0 31.0 41.0 26 36.26527223280118 38.0 35.0 40.0 31.0 41.0 27 36.15667316082961 38.0 35.0 40.0 30.0 41.0 28 36.06886914202472 38.0 35.0 40.0 30.0 41.0 29 36.116595912725835 38.0 35.0 40.0 30.0 41.0 30 36.083461476450196 38.0 35.0 40.0 30.0 41.0 31 36.00937901076118 38.0 35.0 40.0 30.0 41.0 32 35.83983945235953 38.0 35.0 40.0 30.0 41.0 33 35.69923170950849 38.0 35.0 40.0 29.0 41.0 34 35.55061007961328 38.0 35.0 40.0 29.0 41.0 35 35.42970358632632 38.0 35.0 40.0 27.0 41.0 36 35.28242577228571 38.0 34.0 40.0 27.0 41.0 37 35.23453422078212 38.0 34.0 40.0 27.0 41.0 38 35.16722978611878 38.0 34.0 40.0 27.0 41.0 39 35.09951410971134 37.0 34.0 40.0 26.0 41.0 40 34.97909911778347 37.0 34.0 40.0 25.0 41.0 41 34.938266861089076 37.0 34.0 40.0 25.0 41.0 42 34.856716699895095 37.0 34.0 40.0 25.0 41.0 43 34.74462740006435 37.0 34.0 40.0 25.0 41.0 44 34.62075911390544 37.0 34.0 40.0 24.0 41.0 45 34.50258144752832 36.0 34.0 40.0 24.0 41.0 46 34.46955213004046 36.0 34.0 40.0 24.0 41.0 47 34.427287274731505 36.0 33.0 40.0 24.0 41.0 48 34.34810583757301 36.0 33.0 40.0 23.0 41.0 49 34.27602133911392 36.0 33.0 40.0 24.0 41.0 50 34.15590536752156 36.0 33.0 40.0 24.0 41.0 51 33.80146186141224 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 2.0 13 4.0 14 15.0 15 39.0 16 99.0 17 246.0 18 590.0 19 1231.0 20 2133.0 21 3510.0 22 5351.0 23 7965.0 24 11737.0 25 17262.0 26 23144.0 27 26044.0 28 27798.0 29 30744.0 30 36292.0 31 43763.0 32 53909.0 33 69711.0 34 111409.0 35 178118.0 36 112692.0 37 131302.0 38 182420.0 39 330183.0 40 215.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.5506718724142 24.043294735324388 28.311614702709154 15.094418689552258 2 31.904049275142032 25.898854418291805 28.97144817466197 13.225648131904192 3 27.21468594696757 25.985293313379703 32.836907490494916 13.963113249157807 4 24.203671912899143 28.27255028833089 32.639454632364796 14.884323166405173 5 22.415445075078253 32.05242302357147 30.85492115735785 14.677210743992426 6 20.224854769161276 41.05265101769902 28.01223923615575 10.710254976983958 7 85.39495188329542 3.7543743265827656 8.904129534757029 1.946544255364787 8 85.19742799895734 3.2490938831519443 8.281726874399386 3.271751243491336 9 78.82389122762407 5.834234774289365 11.429253280167849 3.912620717918705 10 42.37572721958676 29.13004969703771 16.27217526995286 12.222047813422675 11 34.12795087259248 23.335873704038054 27.318242158173945 15.217933265195525 12 30.944343153180093 22.07118104509383 29.406696777043763 17.577779024682314 13 21.051812908445086 33.302342231259914 30.81720624093084 14.82863861936416 14 16.560896805312193 36.62778928796937 30.382880979252537 16.428432927465906 15 15.086818885300488 25.568866656107435 44.1005986799069 15.243715778685177 16 17.175912740041948 22.723840870042636 41.899070337964005 18.20117605195141 17 17.05630460583651 23.949042957360835 30.820899603744785 28.17375283305787 18 20.46485232585972 25.09476671797126 34.49643483949142 19.943946116677594 19 24.809738545425876 28.223116047590402 27.928002153514626 19.0391432534691 20 26.846557111108428 25.990265147936935 27.139256114113547 20.023921626841087 21 21.33762236927804 30.605264036376784 28.510630137414406 19.546483456930773 22 21.296711273492804 26.05546720684465 27.790708493527028 24.857113026135515 23 18.22773985372863 31.23121800713245 26.847622504227836 23.693419634911088 24 19.27360076594663 27.04138199954401 35.48192347494302 18.20309375956634 25 18.536845910772616 28.349400645344126 32.174517075055526 20.939236368827736 26 17.70974571907288 33.37216099368506 29.029192481733833 19.888900805508225 27 18.7198094224788 31.515109760350473 29.790451378654208 19.974629438516516 28 17.150059200344337 29.40683882945968 35.42091196230497 18.022190007891012 29 17.11198915287752 26.251286462191686 34.58706428084899 22.049660104081806 30 19.246255675881844 29.8005371001846 31.545580003565515 19.40762722036804 31 24.254952835046602 27.972961743153608 27.543679342240495 20.228406079559296 32 24.282226898903424 27.778420959549866 28.328376887787826 19.610975253758884 33 22.536473733442904 28.74459046643621 28.96171758417138 19.757218215949504 34 18.18476899791254 28.74778664579443 29.990319127854985 23.077125228438042 35 18.09371339930721 27.284007525936993 31.979195003164218 22.643084071591577 36 22.986495787080475 28.565320317543968 29.161656359580125 19.286527535795432 37 18.639904938523266 30.842207466132926 30.91131596647847 19.606571628865336 38 18.74111728486694 32.39427216248524 26.92468593986495 21.93992461278287 39 18.47064948495345 31.042927529829235 28.95944474551665 21.526978239700668 40 21.425055631277385 27.606111379037753 28.428594867220053 22.54023812246481 41 17.29140135418568 26.62140403187372 28.9791190051217 27.1080756088189 42 20.961041414671598 27.815212535273393 26.865165977594074 24.358580072460935 43 20.99612836140407 26.89137464833149 29.71033381607479 22.402163174189642 44 20.002897869284787 30.664926051063585 28.8235005834803 20.508675496171332 45 17.813088851655372 33.39915095271004 26.585535796853684 22.202224398780906 46 21.33023564365015 30.950735511896532 26.88235431992051 20.836674524532807 47 20.427776645304352 28.44216087294051 28.415383992539407 22.714678489215736 48 21.260558933640926 26.6358223520897 30.047921382510935 22.055697331758445 49 20.492126389716542 25.88912382780122 30.793199382640204 22.825550399842037 50 18.571151569217527 30.186493514241818 29.684054119129417 21.55830079741124 51 18.457083479233003 31.066153099832306 27.404894131885726 23.071869289048966 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1561.0 1 1737.0 2 1913.0 3 10747.0 4 19581.0 5 13196.0 6 6811.0 7 7178.0 8 7545.0 9 8777.5 10 10010.0 11 11194.5 12 12379.0 13 12757.0 14 13135.0 15 12801.5 16 12468.0 17 11702.0 18 10936.0 19 10147.5 20 9359.0 21 9188.5 22 9018.0 23 8877.0 24 8736.0 25 9624.0 26 11910.5 27 13309.0 28 15390.0 29 17471.0 30 19707.5 31 21944.0 32 25589.0 33 29234.0 34 32705.5 35 36177.0 36 41148.0 37 46119.0 38 55016.0 39 63913.0 40 76820.0 41 89727.0 42 105904.5 43 122082.0 44 136495.5 45 150909.0 46 148919.0 47 146929.0 48 134980.0 49 123031.0 50 110981.0 51 98931.0 52 88441.0 53 77951.0 54 67723.5 55 57496.0 56 51842.5 57 46189.0 58 40527.0 59 34865.0 60 31452.5 61 28040.0 62 24801.5 63 21563.0 64 19134.0 65 16705.0 66 14198.5 67 11692.0 68 9380.5 69 7069.0 70 6002.5 71 4936.0 72 4156.5 73 3377.0 74 2704.0 75 1603.0 76 1175.0 77 867.5 78 560.0 79 453.0 80 346.0 81 230.0 82 114.0 83 71.5 84 29.0 85 22.0 86 15.0 87 22.0 88 29.0 89 17.0 90 5.0 91 4.5 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1407931.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.565920747760714 #Duplication Level Percentage of deduplicated Percentage of total 1 77.26204288105514 22.07061393750311 2 7.845674512674244 4.482378326835573 3 3.0915990950836085 2.649431242020213 4 1.8370189186976051 2.099045473746115 5 1.1686040619806706 1.6691125510025544 6 0.8688284961601582 1.489133157882432 7 0.706901359990137 1.4135301758173766 8 0.5362849472161392 1.2255578640314617 9 0.4648353673959385 1.1950605239209755 >10 4.997573519259447 31.934640881800586 >50 1.0136104910906907 20.018575486462822 >100 0.20301615378970087 7.650479431510153 >500 0.0022557350287034606 0.4279342599355703 >1k 0.0015038233524689735 0.6652061584509592 >5k 0.0 0.0 >10k+ 2.5063722541149563E-4 1.0093005290800963 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14097 1.0012564536188209 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3073 0.2182635370625407 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTC 1522 0.10810188851584346 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.102620796047533E-5 0.0 0.0 0.09659564282624646 0.0 2 7.102620796047533E-5 0.0 0.0 0.34426402998442396 0.0 3 7.102620796047533E-5 0.0 0.0 0.5390889184200078 0.0 4 7.102620796047533E-5 0.0 0.0 0.8822165290770642 0.0 5 7.102620796047533E-5 0.0 0.0 1.5557580591662517 0.0 6 7.102620796047533E-5 0.0 0.0 2.671224655185517 0.0 7 7.102620796047533E-5 0.0 0.0 3.3080456357591386 0.0 8 7.102620796047533E-5 0.0 0.0 4.963382438485977 0.0 9 7.102620796047533E-5 0.0 0.0 5.733945768649174 0.0 10 7.102620796047533E-5 0.0 0.0 6.838829459682328 0.0 11 7.102620796047533E-5 0.0 0.0 7.520823108518813 0.0 12 7.102620796047533E-5 0.0 0.0 8.191949747537343 0.0 13 7.102620796047533E-5 0.0 0.0 8.520659037978424 0.0 14 7.102620796047533E-5 0.0 0.0 8.667044052584963 0.0 15 7.102620796047533E-5 0.0 0.0 8.816483194133804 0.0 16 7.102620796047533E-5 0.0 0.0 9.07587090560546 0.0 17 7.102620796047533E-5 0.0 0.0 9.362035497478214 0.0 18 7.102620796047533E-5 0.0 0.0 9.806020323439146 0.0 19 7.102620796047533E-5 0.0 0.0 10.0053908891842 0.0 20 7.102620796047533E-5 0.0 0.0 10.205116585969057 0.0 21 7.102620796047533E-5 0.0 0.0 10.43275558248238 0.0 22 7.102620796047533E-5 0.0 0.0 10.688805062179894 0.0 23 7.102620796047533E-5 0.0 0.0 10.982072274848697 0.0 24 7.102620796047533E-5 0.0 0.0 11.202892755397814 0.0 25 1.4205241592095066E-4 0.0 0.0 11.388697315422418 0.0 26 1.4205241592095066E-4 0.0 0.0 11.566760018779329 0.0 27 1.4205241592095066E-4 0.0 0.0 11.760093356847744 0.0 28 1.4205241592095066E-4 0.0 0.0 11.955983638402735 0.0 29 1.4205241592095066E-4 0.0 0.0 12.166505318797583 0.0 30 1.4205241592095066E-4 0.0 0.0 12.487827883610773 0.0 31 1.4205241592095066E-4 0.0 0.0 12.7158220111639 0.0 32 1.4205241592095066E-4 0.0 0.0 12.93571915100953 0.0 33 1.4205241592095066E-4 0.0 0.0 13.148229565227274 0.0 34 1.4205241592095066E-4 0.0 0.0 13.36294179189179 0.0 35 1.4205241592095066E-4 0.0 0.0 13.612101729417137 0.0 36 1.4205241592095066E-4 0.0 0.0 13.83526607482895 0.0 37 1.4205241592095066E-4 0.0 0.0 14.06517790999701 0.0 38 1.4205241592095066E-4 0.0 0.0 14.292816906510334 0.0 39 1.4205241592095066E-4 0.0 0.0 14.52976033626648 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGTCG 30 2.1658507E-6 45.000004 1 CCGGTCT 30 2.1658507E-6 45.000004 23 CACGCTA 20 7.033829E-4 45.0 38 CCGTCGA 20 7.033829E-4 45.0 17 AACGCAT 20 7.033829E-4 45.0 44 CGCAAGT 20 7.033829E-4 45.0 16 ACGGGTA 85 0.0 42.352943 5 CGGTCTA 85 0.0 42.352943 31 ATACCGG 70 0.0 41.785713 2 TCGATAG 65 0.0 41.538464 1 CGTTTTT 6840 0.0 41.348682 1 CGTTGAT 120 0.0 41.250004 25 ACTACGG 60 3.6379788E-12 41.250004 2 TCGTTGA 110 0.0 40.90909 24 TATAGCG 90 0.0 40.0 1 TACGTAG 45 1.9288564E-8 40.0 1 CGTTCGG 310 0.0 39.919353 45 AGGGCGA 1605 0.0 39.532707 6 CATACGA 115 0.0 39.130432 18 ATACGAA 115 0.0 39.130432 19 >>END_MODULE