##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546595_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3434931 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.482555253657207 31.0 31.0 33.0 30.0 34.0 2 31.8500028093723 31.0 31.0 34.0 30.0 34.0 3 31.93461469822829 33.0 31.0 34.0 30.0 34.0 4 35.69713452759313 37.0 35.0 37.0 33.0 37.0 5 35.64075959604429 37.0 35.0 37.0 33.0 37.0 6 35.68952243873312 37.0 35.0 37.0 33.0 37.0 7 36.037189393324056 37.0 35.0 37.0 35.0 37.0 8 34.70381413775124 37.0 35.0 37.0 33.0 37.0 9 36.97688716309003 39.0 37.0 39.0 33.0 39.0 10 36.94218486484881 39.0 37.0 39.0 32.0 39.0 11 36.89864745463591 39.0 37.0 39.0 33.0 39.0 12 36.64098638371484 39.0 35.0 39.0 32.0 39.0 13 36.576270382141594 39.0 35.0 39.0 32.0 39.0 14 37.701235920022846 40.0 36.0 41.0 33.0 41.0 15 37.83850039491332 40.0 36.0 41.0 33.0 41.0 16 37.87877078171294 40.0 36.0 41.0 33.0 41.0 17 37.780249443147476 40.0 36.0 41.0 33.0 41.0 18 37.68701001563059 39.0 36.0 41.0 33.0 41.0 19 37.60774554132237 39.0 36.0 41.0 33.0 41.0 20 37.45208477259077 39.0 35.0 41.0 33.0 41.0 21 37.35332645692155 39.0 35.0 41.0 32.0 41.0 22 37.265988166865654 39.0 35.0 41.0 32.0 41.0 23 37.19406765376073 39.0 35.0 41.0 32.0 41.0 24 37.06500858386966 39.0 35.0 41.0 32.0 41.0 25 36.96192645500012 39.0 35.0 41.0 32.0 41.0 26 36.86491053240953 39.0 35.0 41.0 31.0 41.0 27 36.73444706749568 38.0 35.0 41.0 31.0 41.0 28 36.73507298982134 38.0 35.0 41.0 31.0 41.0 29 36.69352572147737 38.0 35.0 41.0 31.0 41.0 30 36.62306520858789 38.0 35.0 41.0 31.0 41.0 31 36.52253451379373 38.0 35.0 41.0 31.0 41.0 32 36.40489488726266 39.0 35.0 41.0 30.0 41.0 33 36.227950430445325 39.0 35.0 41.0 30.0 41.0 34 36.0395486838018 39.0 35.0 41.0 30.0 41.0 35 35.89797961007077 38.0 35.0 41.0 29.0 41.0 36 35.780109993475854 38.0 35.0 41.0 28.0 41.0 37 35.73747594929854 38.0 35.0 41.0 28.0 41.0 38 35.631151833908746 38.0 35.0 41.0 28.0 41.0 39 35.54523045732214 38.0 35.0 41.0 27.0 41.0 40 35.41865265998065 38.0 35.0 40.0 27.0 41.0 41 35.325743952353044 38.0 35.0 40.0 26.0 41.0 42 35.25363537142376 38.0 34.0 40.0 26.0 41.0 43 35.16467812599438 38.0 34.0 40.0 26.0 41.0 44 35.04346375516713 38.0 34.0 40.0 26.0 41.0 45 34.93190518237484 37.0 34.0 40.0 25.0 41.0 46 34.87212086647447 37.0 34.0 40.0 25.0 41.0 47 34.81528013226467 37.0 34.0 40.0 25.0 41.0 48 34.731262432928055 37.0 34.0 40.0 24.0 41.0 49 34.66412105512454 37.0 34.0 40.0 24.0 41.0 50 34.56030354030401 37.0 34.0 40.0 24.0 41.0 51 34.20166198389429 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 6.0 11 6.0 12 11.0 13 20.0 14 41.0 15 80.0 16 225.0 17 593.0 18 1290.0 19 2650.0 20 4634.0 21 7470.0 22 11472.0 23 16984.0 24 25264.0 25 37029.0 26 50583.0 27 58766.0 28 61648.0 29 67315.0 30 76403.0 31 92904.0 32 115293.0 33 149024.0 34 238906.0 35 356814.0 36 274894.0 37 355311.0 38 522229.0 39 906381.0 40 684.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.31268342799317 23.623676865707054 26.59718637725183 15.46645332904795 2 34.27448760979478 24.85118332799116 27.443695375540294 13.430633686673765 3 29.89425406216311 24.38922353898812 31.75787228331515 13.958650115533617 4 25.831290351975046 27.32546883765642 30.942950527972762 15.900290282395774 5 22.885991014084418 31.54508780525722 30.065290976732868 15.503630203925495 6 20.85287884967704 40.25303565049778 28.26388652348475 10.630198976340427 7 84.4838513495613 4.235863835401642 9.103268741060592 2.1770160739764495 8 81.14940300110833 6.68301634006622 8.894705599617577 3.2728750592078852 9 77.82194169256967 5.869812232036102 12.110083142863715 4.198162932530523 10 39.401752174934515 27.086482959919717 18.410675498285116 15.101089366860645 11 32.086961863280514 24.896569974768052 26.263933686004172 16.75253447594726 12 28.37352482480725 22.520423263232946 30.870925791522453 18.235126120437354 13 24.077892685471703 26.529237414084882 31.462582508935405 17.93028739150801 14 19.86956943239908 29.891109894201662 31.959914187504783 18.279406485894476 15 18.803114240140488 23.94411998377842 39.0545836291908 18.19818214689029 16 21.89537431756271 21.79840002608495 36.53753161271653 19.76869404363581 17 21.663171691076183 22.106470260974675 30.94073796533322 25.289620082615926 18 23.15071248883893 22.80104025379258 33.34809345515237 20.700153802216114 19 26.55011119582897 24.803846132571515 28.482668210802487 20.16337446079703 20 27.418949609177012 23.936987380532535 27.830166020802167 20.81389698948829 21 25.060823638087637 26.18655221895287 29.53293676059286 19.219687382366633 22 24.04368530255775 23.173187467230054 28.97819490406066 23.80493232615153 23 21.89878049952095 26.710784001192454 28.282664193254536 23.107771306032056 24 21.82649374907385 24.59257551316169 32.75736834306133 20.823562394703124 25 22.120793692799072 24.975203286470673 30.970025307640825 21.933977713089433 26 20.294381459190884 27.67531574870063 29.674569882189772 22.355732909918714 27 20.669148812596237 26.349233798291728 30.44002921747191 22.54158817164013 28 20.20346260230555 26.290076860350325 33.045729302859364 20.46073123448477 29 21.078560238910185 24.773627184941997 31.773796911786583 22.374015664361234 30 21.895985683555217 26.265738671315376 31.041205776768148 20.797069868361255 31 25.02932373314049 25.750153350969786 27.766059929588106 21.454462986301618 32 25.38985499272038 25.763807191469056 28.448140588559127 20.398197227251437 33 24.474610989274602 26.72251640571528 27.161156949004216 21.6417156560059 34 21.174719375731275 26.74117762481983 29.474769653305994 22.609333346142908 35 21.351404147565116 26.76729168649967 29.837717264189585 22.043586901745623 36 24.762477033745363 26.90840078010301 27.202496935164056 21.126625250987573 37 21.837702125603105 28.760635948727938 27.733220841990715 21.668441083678243 38 22.686161672534325 29.242392350821607 26.49278835586508 21.57865762077899 39 22.006148012871293 27.255249086517313 27.35137911067209 23.387223789939306 40 23.756110384750087 25.007110768746156 28.332912655305158 22.9038661911986 41 20.751100968258168 25.076544477894895 29.160673096490147 25.011681457356786 42 22.8928033780009 25.988789876710772 27.399152996086386 23.71925374920195 43 21.81569294987294 26.004306927853865 28.772106339253977 23.407893783019222 44 21.92626285651735 26.847235068186233 28.740926673636242 22.485575401660178 45 21.007205093785 28.117013121952084 28.110724786029177 22.765056998233735 46 22.81396627763411 27.15073461446533 28.291776457809487 21.74352265009108 47 21.99863694496338 26.579485876135507 28.780811026480592 22.64106615242053 48 21.97217353128782 25.88069454670269 29.68522511805914 22.461906803950356 49 22.218524913600884 24.572953576068922 29.88784927557497 23.320672234755225 50 21.484827497262682 26.802750914064937 29.036070884684438 22.67635070398794 51 21.172535925758044 27.445907938179836 28.03410024830193 23.34745588776019 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3622.0 1 5022.5 2 6423.0 3 27886.0 4 49349.0 5 34033.0 6 18717.0 7 18748.0 8 18779.0 9 19706.0 10 20633.0 11 20690.0 12 20747.0 13 20765.0 14 20783.0 15 20045.5 16 19308.0 17 18493.0 18 17678.0 19 17131.0 20 16584.0 21 17485.5 22 18387.0 23 19222.0 24 20057.0 25 21947.0 26 28013.0 27 32189.0 28 36658.0 29 41127.0 30 47522.0 31 53917.0 32 61918.0 33 69919.0 34 77789.5 35 85660.0 36 94878.0 37 104096.0 38 112321.0 39 120546.0 40 144082.5 41 167619.0 42 192715.0 43 217811.0 44 241182.5 45 264554.0 46 278095.0 47 291636.0 48 279985.5 49 268335.0 50 252731.5 51 237128.0 52 222082.0 53 207036.0 54 193546.5 55 180057.0 56 173794.5 57 167532.0 58 157082.0 59 146632.0 60 136068.0 61 125504.0 62 115740.0 63 105976.0 64 97561.0 65 89146.0 66 75880.5 67 62615.0 68 53282.5 69 43950.0 70 36242.5 71 28535.0 72 24321.0 73 20107.0 74 16786.5 75 10467.0 76 7468.0 77 5654.0 78 3840.0 79 2921.5 80 2003.0 81 1493.0 82 983.0 83 667.0 84 351.0 85 231.0 86 111.0 87 96.5 88 82.0 89 82.0 90 82.0 91 42.0 92 2.0 93 4.5 94 7.0 95 6.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3434931.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.289586995400278 #Duplication Level Percentage of deduplicated Percentage of total 1 79.97349612995039 17.82576199314837 2 7.008384460004646 3.1242799023697 3 2.3682781912014295 1.5836382831628044 4 1.2934564359225125 1.153224390130209 5 0.8346394440707486 0.9301884249203738 6 0.5930677068504546 0.7931540547603456 7 0.46598495809580764 0.727062858341712 8 0.36799240279826556 0.6561918940654657 9 0.3108660802462859 0.6236168885611806 >10 4.333180140894926 23.812400815860265 >50 1.8640441646322978 29.629229109126154 >100 0.5789942650387445 16.687801952569124 >500 0.005439728781102342 0.8340739890287142 >1k 0.0020398982929133785 0.7505332158871553 >5k 0.0 0.0 >10k+ 1.3599321952755854E-4 0.868842228068398 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28663 0.8344563544362318 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3688 0.10736751335034096 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.9112666309745377E-5 0.0 0.0 0.061806190575589434 0.0 2 2.9112666309745377E-5 0.0 0.0 0.19784968024102959 0.0 3 2.9112666309745377E-5 0.0 0.0 0.32416953935901477 0.0 4 2.9112666309745377E-5 0.0 0.0 0.5079578017724373 0.0 5 2.9112666309745377E-5 0.0 0.0 0.8400750990340127 0.0 6 2.9112666309745377E-5 0.0 0.0 1.4600002154337306 0.0 7 2.9112666309745377E-5 0.0 0.0 1.8115065484575963 0.0 8 2.9112666309745377E-5 0.0 0.0 2.69953020890376 0.0 9 2.9112666309745377E-5 0.0 0.0 3.1948240008314577 0.0 10 2.9112666309745377E-5 0.0 0.0 3.9334705704423176 0.0 11 2.9112666309745377E-5 0.0 0.0 4.406638735974609 0.0 12 2.9112666309745377E-5 0.0 0.0 4.836370803372761 0.0 13 2.9112666309745377E-5 0.0 0.0 5.034948300271534 0.0 14 2.9112666309745377E-5 0.0 0.0 5.120306637891708 0.0 15 2.9112666309745377E-5 2.9112666309745377E-5 0.0 5.218503661354479 0.0 16 2.9112666309745377E-5 2.9112666309745377E-5 0.0 5.407066401042699 0.0 17 2.9112666309745377E-5 2.9112666309745377E-5 0.0 5.6156004298194055 0.0 18 2.9112666309745377E-5 2.9112666309745377E-5 0.0 5.9311235072844255 0.0 19 2.9112666309745377E-5 2.9112666309745377E-5 0.0 6.0661771662953345 0.0 20 2.9112666309745377E-5 2.9112666309745377E-5 0.0 6.22449184568773 0.0 21 2.9112666309745377E-5 2.9112666309745377E-5 0.0 6.405630855466966 0.0 22 2.9112666309745377E-5 2.9112666309745377E-5 0.0 6.601646437730482 0.0 23 2.9112666309745377E-5 2.9112666309745377E-5 0.0 6.816527027762712 0.0 24 2.9112666309745377E-5 2.9112666309745377E-5 0.0 6.985758957021262 0.0 25 2.9112666309745377E-5 2.9112666309745377E-5 0.0 7.130594471912245 0.0 26 2.9112666309745377E-5 2.9112666309745377E-5 0.0 7.272373156840705 0.0 27 2.9112666309745377E-5 2.9112666309745377E-5 0.0 7.418489629049317 0.0 28 2.9112666309745377E-5 2.9112666309745377E-5 0.0 7.5674591425562845 0.0 29 2.9112666309745377E-5 2.9112666309745377E-5 0.0 7.728073722587149 0.0 30 2.9112666309745377E-5 2.9112666309745377E-5 0.0 7.949475549872763 0.0 31 2.9112666309745377E-5 2.9112666309745377E-5 0.0 8.123773083069208 0.0 32 2.9112666309745377E-5 2.9112666309745377E-5 0.0 8.29748836293946 0.0 33 2.9112666309745377E-5 2.9112666309745377E-5 0.0 8.472397262128409 0.0 34 2.9112666309745377E-5 2.9112666309745377E-5 0.0 8.649285822626423 0.0 35 2.9112666309745377E-5 2.9112666309745377E-5 0.0 8.84611655954661 0.0 36 2.9112666309745377E-5 2.9112666309745377E-5 0.0 9.02559614734619 0.0 37 2.9112666309745377E-5 2.9112666309745377E-5 0.0 9.211189395070818 0.0 38 2.9112666309745377E-5 2.9112666309745377E-5 0.0 9.408544159984581 0.0 39 2.9112666309745377E-5 2.9112666309745377E-5 0.0 9.639320265821933 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 270 0.0 41.666668 31 CGTTTTT 17435 0.0 41.15429 1 TATCACG 50 1.0822987E-9 40.500004 1 TCGATAG 195 0.0 39.23077 1 TCACGAC 270 0.0 39.166668 25 CGACGGT 275 0.0 38.45454 28 TACGGGA 975 0.0 38.076923 4 GCGATCG 270 0.0 37.500004 9 CCGCGTA 30 1.1403946E-4 37.500004 14 TAGGGCG 1635 0.0 37.43119 5 AGGGCGA 3825 0.0 37.35294 6 ACGGGAT 995 0.0 37.311558 5 CGTTCGA 250 0.0 36.899998 14 CACGACC 575 0.0 36.782608 27 TAGGGAC 2310 0.0 36.72078 5 GGGCGAT 8000 0.0 36.703125 7 ACGGGTA 290 0.0 36.465515 5 CGCATCG 155 0.0 36.29032 21 GTAGGGC 1615 0.0 36.08359 4 GCCAGTA 2000 0.0 36.0 25 >>END_MODULE