##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546591_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3001620 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.42767039132202 31.0 31.0 33.0 30.0 34.0 2 31.78485651081749 31.0 31.0 34.0 30.0 34.0 3 31.855342448411193 31.0 31.0 34.0 30.0 34.0 4 35.63808610017257 37.0 35.0 37.0 33.0 37.0 5 35.575012160100215 37.0 35.0 37.0 33.0 37.0 6 35.62161366195588 37.0 35.0 37.0 33.0 37.0 7 35.99005403748642 37.0 35.0 37.0 35.0 37.0 8 34.660651248325905 37.0 35.0 37.0 33.0 37.0 9 36.93688141736796 39.0 37.0 39.0 33.0 39.0 10 36.88326037273206 39.0 37.0 39.0 32.0 39.0 11 36.8482326210513 39.0 37.0 39.0 32.0 39.0 12 36.60448291256055 39.0 35.0 39.0 32.0 39.0 13 36.53603853918884 39.0 35.0 39.0 32.0 39.0 14 37.629613675282016 40.0 36.0 41.0 32.0 41.0 15 37.77714933935675 40.0 36.0 41.0 33.0 41.0 16 37.827792991784435 40.0 36.0 41.0 33.0 41.0 17 37.71406273945403 40.0 36.0 41.0 33.0 41.0 18 37.639814167016475 39.0 36.0 41.0 33.0 41.0 19 37.54568433046155 39.0 36.0 41.0 33.0 41.0 20 37.384880497864486 39.0 35.0 41.0 32.0 41.0 21 37.28610783510238 39.0 35.0 41.0 32.0 41.0 22 37.20041844070868 39.0 35.0 41.0 32.0 41.0 23 37.12026572317615 39.0 35.0 41.0 32.0 41.0 24 36.98679413116917 39.0 35.0 41.0 32.0 41.0 25 36.869180975606504 39.0 35.0 41.0 31.0 41.0 26 36.76898474823595 38.0 35.0 41.0 31.0 41.0 27 36.6449930370933 38.0 35.0 41.0 31.0 41.0 28 36.66040937893538 38.0 35.0 41.0 31.0 41.0 29 36.575899347685585 38.0 35.0 41.0 31.0 41.0 30 36.505109241009855 38.0 35.0 41.0 31.0 41.0 31 36.36203783290357 38.0 35.0 41.0 30.0 41.0 32 36.25918603953865 38.0 35.0 41.0 30.0 41.0 33 36.063881170834414 38.0 35.0 41.0 30.0 41.0 34 35.89543846322986 38.0 35.0 41.0 29.0 41.0 35 35.73610783510238 38.0 35.0 41.0 28.0 41.0 36 35.6292058954831 38.0 35.0 41.0 27.0 41.0 37 35.59040984535018 38.0 35.0 41.0 27.0 41.0 38 35.495718978418324 38.0 35.0 40.0 27.0 41.0 39 35.4139727880278 38.0 35.0 40.0 27.0 41.0 40 35.275492900500396 38.0 34.0 40.0 26.0 41.0 41 35.182219268261804 38.0 34.0 40.0 26.0 41.0 42 35.10086619891925 38.0 34.0 40.0 26.0 41.0 43 34.99626335112373 38.0 34.0 40.0 25.0 41.0 44 34.85868897462037 37.0 34.0 40.0 24.0 41.0 45 34.7277117023474 37.0 34.0 40.0 24.0 41.0 46 34.66151344940399 37.0 34.0 40.0 24.0 41.0 47 34.59004370973008 37.0 34.0 40.0 24.0 41.0 48 34.508218561976534 37.0 34.0 40.0 24.0 41.0 49 34.4561350204223 36.0 34.0 40.0 24.0 41.0 50 34.34148326570319 36.0 34.0 40.0 24.0 41.0 51 33.9716226570985 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 6.0 11 5.0 12 8.0 13 18.0 14 38.0 15 96.0 16 196.0 17 575.0 18 1159.0 19 2452.0 20 4214.0 21 6824.0 22 10535.0 23 15530.0 24 22950.0 25 33731.0 26 45656.0 27 53277.0 28 56986.0 29 61673.0 30 70763.0 31 85355.0 32 104880.0 33 134737.0 34 211377.0 35 304766.0 36 249901.0 37 320801.0 38 456386.0 39 746147.0 40 577.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.13182881244128 23.291156109034457 26.33721123926413 15.239803839260132 2 34.94509631465675 23.98254942331141 27.543992910495003 13.528361351536835 3 29.565501295966847 24.97261478801447 31.884515694858113 13.577368221160574 4 26.042570345346842 27.205075925666804 31.225671470739137 15.526682258247213 5 22.88754072800688 31.197186852433017 29.94356380887654 15.971708610683564 6 20.956117030137058 40.4188071774575 27.864219987873216 10.76085580453222 7 83.76626621624322 4.214790679699629 9.667146407606559 2.351796696450583 8 80.6157008548717 6.595271886514616 9.241309692765906 3.5477175658477758 9 77.0893717392608 5.717745750627994 12.525336318388069 4.667546191723136 10 39.36447651601468 25.731538302649902 19.070335352243124 15.83364982909229 11 31.46161073020569 24.545412144108848 26.58874207927719 17.404235046408274 12 27.90679699628867 21.447751547497685 31.38948301250658 19.255968443707065 13 23.955697256814652 25.129463423084868 32.921055963113254 17.99378335698723 14 20.012793091730465 28.680445892551354 32.71173566274212 18.595025352976062 15 18.35458852219801 23.470359339290116 39.410385058734946 18.76466707977692 16 21.735029750601342 21.12562549556573 36.65250764587123 20.4868371079617 17 21.043803013039625 22.620818091563887 30.893284293148366 25.442094602248122 18 23.694438336631553 22.507279402456007 32.60089551642113 21.197386744491308 19 26.436057862087807 24.95432466468107 27.972594798808643 20.63702267442248 20 27.4089658251211 23.956863293821336 26.895043343261303 21.739127537796257 21 25.094082528767796 25.653780291975664 29.372005783543553 19.880131395712983 22 23.765300071294835 22.70074159953625 28.835861967870684 24.698096361298234 23 22.25101778373012 26.0922102064885 28.032995515754827 23.623776494026558 24 22.691479934168882 24.346919330228342 31.984561670031514 20.977039065571258 25 22.673123180149386 24.41531572950607 29.99303709330295 22.9185239970416 26 20.445892551355602 26.72070415309066 29.012333339996406 23.821069955557334 27 21.35027085373898 25.36093842658298 30.353842258513737 22.934948461164304 28 21.302596597837166 25.227210639587955 31.52650901846336 21.943683744111514 29 21.791365995695656 24.91604533551882 30.407213438076774 22.885375230708753 30 23.190177304255702 25.582418827166663 30.27718365416009 20.95022021441755 31 25.869297246153742 25.246800061300227 27.243088732084676 21.64081396046135 32 26.14927938912987 25.3570738467894 27.35869297246154 21.134953791619193 33 24.478881404041815 25.407846429594688 27.384878832097336 22.728393334266165 34 22.080809696097443 26.178396998953897 29.142929484744904 22.597863820203756 35 21.596437923521297 25.719678040524784 30.080156715373697 22.60372732058022 36 24.886094842118588 26.111932889572962 27.520438962960004 21.481533305348446 37 22.16636349704493 26.991424630699424 28.82756644745171 22.014645424803938 38 22.699075832383848 27.19318234819864 27.606892278169788 22.500849541247725 39 21.97603294221121 25.616833576535335 27.670524583391636 24.73660889786182 40 23.454034821196554 24.0638055450057 29.283120448291257 23.199039185506493 41 20.598110353742314 23.90822289297113 29.38786388683444 26.105802866452116 42 23.1693218995076 25.744398025066463 27.328609217689113 23.757670857736823 43 22.6598303582732 24.404055143555816 28.804512230062436 24.131602268108555 44 23.050552701541168 25.69309239677241 28.15436331047901 23.101991591207415 45 21.24522757710836 26.565221447085243 28.454867704772756 23.734683271033642 46 23.63543686409339 25.599109814033756 28.112319347552322 22.653133974320532 47 22.299858076638614 25.69086026878819 29.382000386457978 22.62728126811522 48 22.00701621124593 25.06743025432933 29.96242029304176 22.963133241382984 49 22.890705685596444 23.67428255408746 29.41511583744778 24.01989592286832 50 21.582778632871584 25.312531233134106 30.095415142489724 23.00927499150459 51 21.73626241829412 26.33617846362964 28.006176664601117 23.921382453475122 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3275.0 1 4669.5 2 6064.0 3 25705.5 4 45347.0 5 30872.0 6 16397.0 7 16543.0 8 16689.0 9 17493.0 10 18297.0 11 18198.5 12 18100.0 13 17801.5 14 17503.0 15 16814.0 16 16125.0 17 15853.0 18 15581.0 19 14865.5 20 14150.0 21 14049.0 22 13948.0 23 15133.5 24 16319.0 25 18194.0 26 21405.0 27 22741.0 28 27259.5 29 31778.0 30 35621.5 31 39465.0 32 43775.0 33 48085.0 34 54900.5 35 61716.0 36 71088.0 37 80460.0 38 88459.0 39 96458.0 40 114882.5 41 133307.0 42 157071.0 43 180835.0 44 202918.5 45 225002.0 46 242527.5 47 260053.0 48 254248.5 49 248444.0 50 228905.0 51 209366.0 52 197118.0 53 184870.0 54 173096.5 55 161323.0 56 155392.0 57 149461.0 58 142625.0 59 135789.0 60 129000.5 61 122212.0 62 112147.5 63 102083.0 64 93213.5 65 84344.0 66 72657.5 67 60971.0 68 52447.0 69 43923.0 70 37577.0 71 31231.0 72 25864.0 73 20497.0 74 17499.0 75 11095.0 76 7689.0 77 5859.0 78 4029.0 79 2778.0 80 1527.0 81 1239.5 82 952.0 83 678.0 84 404.0 85 276.0 86 148.0 87 105.5 88 63.0 89 38.5 90 14.0 91 9.5 92 5.0 93 5.5 94 6.0 95 5.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3001620.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.37290218108332 #Duplication Level Percentage of deduplicated Percentage of total 1 79.13361695526203 19.287159052859177 2 7.236223418489699 3.5273553107862754 3 2.4690892624114555 1.8053661320735275 4 1.3713532962643813 1.3369543898223175 5 0.8740305883428606 1.0651331016477623 6 0.6552943897571648 0.9582855636818439 7 0.5170508801924738 0.8821421367901937 8 0.4455331604123807 0.8687148909727888 9 0.3482487190324811 0.7639048767299608 >10 5.003916491865564 30.079826183633386 >50 1.6939259537940454 28.515238895246082 >100 0.2437908787687865 8.042166010747877 >500 0.004953753379165291 0.8756562298746782 >1k 0.0028307162166658806 1.0388931223962263 >5k 0.0 0.0 >10k+ 1.4153581083329404E-4 0.9532041027378313 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27632 0.92056955910475 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.663068609617474E-5 0.0 0.0 0.09161719338224025 0.0 2 6.663068609617474E-5 0.0 0.0 0.28777793324937867 0.0 3 6.663068609617474E-5 0.0 0.0 0.4740773315742832 0.0 4 6.663068609617474E-5 0.0 0.0 0.7598896595838247 0.0 5 6.663068609617474E-5 0.0 0.0 1.2930017790393187 0.0 6 6.663068609617474E-5 0.0 0.0 2.1908502741852733 0.0 7 6.663068609617474E-5 0.0 0.0 2.658930844010901 0.0 8 6.663068609617474E-5 0.0 0.0 3.806344573930078 0.0 9 6.663068609617474E-5 0.0 0.0 4.443433879038652 0.0 10 6.663068609617474E-5 0.0 0.0 5.39418713894497 0.0 11 6.663068609617474E-5 0.0 0.0 6.041670831084548 0.0 12 6.663068609617474E-5 0.0 0.0 6.605966111633052 0.0 13 6.663068609617474E-5 0.0 0.0 6.871022980923635 0.0 14 6.663068609617474E-5 0.0 0.0 6.995189264463856 0.0 15 6.663068609617474E-5 0.0 0.0 7.130416241896043 0.0 16 6.663068609617474E-5 0.0 0.0 7.379481746523544 0.0 17 6.663068609617474E-5 0.0 0.0 7.65040211619059 0.0 18 6.663068609617474E-5 0.0 0.0 8.06514482179623 0.0 19 6.663068609617474E-5 0.0 0.0 8.255941791432626 0.0 20 6.663068609617474E-5 0.0 0.0 8.459665114171681 0.0 21 6.663068609617474E-5 0.0 0.0 8.686575915672204 0.0 22 6.663068609617474E-5 0.0 0.0 8.923481320087152 0.0 23 6.663068609617474E-5 0.0 0.0 9.197100232541095 0.0 24 6.663068609617474E-5 0.0 0.0 9.415648882936548 0.0 25 6.663068609617474E-5 0.0 0.0 9.596651141716807 0.0 26 6.663068609617474E-5 0.0 0.0 9.764427209306975 0.0 27 6.663068609617474E-5 0.0 0.0 9.962953338530527 0.0 28 6.663068609617474E-5 0.0 0.0 10.149019529454094 0.0 29 6.663068609617474E-5 0.0 0.0 10.357906730365602 0.0 30 6.663068609617474E-5 0.0 0.0 10.628493946602168 0.0 31 9.99460291442621E-5 0.0 0.0 10.839180176038273 0.0 32 9.99460291442621E-5 0.0 0.0 11.054264030756725 0.0 33 9.99460291442621E-5 0.0 0.0 11.273778826100573 0.0 34 9.99460291442621E-5 0.0 0.0 11.497857823442008 0.0 35 9.99460291442621E-5 0.0 0.0 11.743725055136892 0.0 36 9.99460291442621E-5 0.0 0.0 11.95157948041391 0.0 37 9.99460291442621E-5 0.0 0.0 12.164797675921669 0.0 38 9.99460291442621E-5 0.0 0.0 12.406500489735542 0.0 39 9.99460291442621E-5 0.0 0.0 12.722429887860555 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 355 0.0 42.464787 25 CGTTTTT 15160 0.0 41.645775 1 CGGTCTA 370 0.0 39.527027 31 GCGTAAG 215 0.0 38.720932 1 ACGACGG 385 0.0 38.57143 27 TAACGGG 700 0.0 37.92857 3 TGATTCG 670 0.0 37.611942 15 TAGGGAC 2145 0.0 37.55245 5 GGGCGAT 6180 0.0 37.06311 7 CGACGGT 395 0.0 37.025314 28 AGGGCGA 3310 0.0 36.8429 6 CACGACG 405 0.0 36.666668 26 CATATGC 1695 0.0 36.63717 33 CGTAAGG 400 0.0 36.5625 2 GTATGCG 130 0.0 36.346153 1 ATAGGGC 1640 0.0 36.219513 4 GGCGATT 1585 0.0 36.19874 8 ATGGGAC 1505 0.0 36.1794 5 TAGGGCG 1345 0.0 36.133827 5 CGTTCGG 1230 0.0 36.036587 45 >>END_MODULE