##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546585_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1413308 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.42263469816912 31.0 31.0 33.0 30.0 34.0 2 31.767468237638223 31.0 31.0 34.0 30.0 34.0 3 31.864622573423485 31.0 31.0 34.0 30.0 34.0 4 35.61202724388456 37.0 35.0 37.0 33.0 37.0 5 35.54026793876494 37.0 35.0 37.0 33.0 37.0 6 35.58653669263883 37.0 35.0 37.0 33.0 37.0 7 35.97031644906843 37.0 35.0 37.0 35.0 37.0 8 34.639794722735594 37.0 35.0 37.0 33.0 37.0 9 36.91141562914807 39.0 37.0 39.0 33.0 39.0 10 36.86017838999001 39.0 37.0 39.0 32.0 39.0 11 36.730349647776706 39.0 35.0 39.0 32.0 39.0 12 36.0651146105449 37.0 35.0 39.0 32.0 39.0 13 35.73918494765472 37.0 35.0 39.0 31.0 39.0 14 36.731435752150276 39.0 35.0 41.0 31.0 41.0 15 37.05751683284889 39.0 35.0 41.0 32.0 41.0 16 37.186667732723514 39.0 35.0 41.0 32.0 41.0 17 37.10922530686871 38.0 35.0 41.0 32.0 41.0 18 37.06877340254212 38.0 35.0 41.0 32.0 41.0 19 37.00366232979648 38.0 35.0 41.0 32.0 41.0 20 36.843317946265074 38.0 35.0 41.0 32.0 41.0 21 36.70317085872294 38.0 35.0 41.0 32.0 41.0 22 36.606291056160444 38.0 35.0 41.0 31.0 41.0 23 36.577172137991155 38.0 35.0 40.0 31.0 41.0 24 36.437669637474634 38.0 35.0 40.0 31.0 41.0 25 36.34177122042754 38.0 35.0 40.0 31.0 41.0 26 36.22302781842316 37.0 35.0 40.0 31.0 41.0 27 36.099487160618914 37.0 35.0 40.0 31.0 41.0 28 36.14569930970461 37.0 35.0 40.0 31.0 41.0 29 36.150049387677704 37.0 35.0 40.0 31.0 41.0 30 36.12180713616565 37.0 35.0 40.0 31.0 41.0 31 35.97674958324725 37.0 35.0 40.0 30.0 41.0 32 35.82941510272354 37.0 35.0 40.0 30.0 41.0 33 35.69291831646039 37.0 35.0 40.0 30.0 41.0 34 35.56550518358348 37.0 35.0 40.0 29.0 41.0 35 35.44928989293204 37.0 35.0 40.0 29.0 41.0 36 35.26101812202294 37.0 34.0 40.0 27.0 41.0 37 35.19310228202204 37.0 34.0 40.0 27.0 41.0 38 35.12219841676407 37.0 34.0 40.0 27.0 41.0 39 35.03158759449462 36.0 34.0 40.0 27.0 41.0 40 34.87372603848559 36.0 34.0 40.0 26.0 41.0 41 34.82220860562595 36.0 34.0 40.0 26.0 41.0 42 34.76009900177456 36.0 34.0 40.0 26.0 41.0 43 34.66508078918396 36.0 34.0 40.0 26.0 41.0 44 34.555010655851376 36.0 34.0 40.0 26.0 41.0 45 34.44558440198456 35.0 34.0 40.0 25.0 41.0 46 34.381945053732096 35.0 34.0 40.0 25.0 41.0 47 34.313487222884184 35.0 34.0 40.0 24.0 41.0 48 34.27379523783917 35.0 34.0 40.0 24.0 41.0 49 34.22879443122094 35.0 34.0 40.0 24.0 41.0 50 34.09809468282922 35.0 34.0 40.0 24.0 41.0 51 33.722087471379204 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 2.0 12 7.0 13 9.0 14 12.0 15 47.0 16 116.0 17 305.0 18 704.0 19 1339.0 20 2341.0 21 3629.0 22 5491.0 23 7954.0 24 11373.0 25 15819.0 26 20922.0 27 24805.0 28 27041.0 29 30190.0 30 35873.0 31 43786.0 32 54566.0 33 71086.0 34 127135.0 35 218649.0 36 100374.0 37 126266.0 38 180898.0 39 302279.0 40 287.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.176626750856855 24.227132373127443 28.40583934995061 13.19040152606509 2 31.42761521197078 26.114265255697976 29.470646171959686 12.987473360371554 3 29.50000990583794 25.869025010825663 31.298697806847482 13.332267276488919 4 26.15028005218962 28.140433649282393 30.49377771865722 15.21550857987077 5 23.327045484777557 32.93379786996182 28.515440371100993 15.223716274159631 6 21.23797502030697 41.406614835548936 26.461960167210545 10.89344997693355 7 84.92508356281859 5.26127355112969 7.57294234519298 2.240700540858751 8 82.46645458739354 7.329187976010891 6.7886830046953675 3.4156744319001944 9 79.5514495071138 6.517829093162991 10.052090556340161 3.8786308433830414 10 49.167202053621715 23.08215901983149 14.803637989737553 12.947000936809244 11 43.9043011148313 21.149742306701725 20.706880595029535 14.239075983437438 12 38.71109482151095 21.20224324775633 24.845115148290393 15.241546782442327 13 22.45632233030592 36.80924469400866 25.61083642065282 15.12359655503259 14 16.7721402553442 40.14213462316778 27.561295910021027 15.524429211466998 15 15.159469839553728 23.371621755484295 46.21674822473233 15.252160180229646 16 16.628859385215396 18.267992539488915 44.894955664299644 20.208192410996045 17 16.601759842865107 20.05493494694716 29.195122365400888 34.14818284478684 18 21.004904804897446 23.081805239905243 34.273350182691956 21.639939772505357 19 28.11779173400278 24.555227876726093 26.617481822787393 20.709498566483738 20 29.628432019064494 23.370489659720317 24.685914181480612 22.31516413973458 21 22.557361877241195 28.13010327543607 27.8646268187826 21.447908028540134 22 22.383372909514414 25.075850416186707 25.62173284238114 26.919043831917744 23 19.77679316893416 29.517911170105883 24.627894273576604 26.077401387383357 24 20.286023994769717 24.430768098673468 36.31105180187192 18.972156104684895 25 19.030671304485647 24.961013452127915 33.07658344819388 22.931731795192555 26 17.576352783681973 31.58752373863305 27.79655956097326 23.039563916711714 27 19.144871464677195 31.238413707415507 28.437042739445328 21.179672088461963 28 17.171770060029377 28.493010723777125 35.544622969657006 18.790596246536495 29 17.67781686652874 24.924857143665783 34.12087103448081 23.27645495532467 30 20.5829868648589 28.595394634432125 30.289151409317718 20.53246709139126 31 28.377112419939603 26.75736640562425 23.75349180787203 21.112029366564116 32 28.951297240233554 26.031693020912638 26.120562538385123 18.89644720046869 33 27.39445329680438 26.616137459067662 24.66390907006824 21.325500174059727 34 21.310287637231234 26.680879185570305 28.738321724634687 23.27051145256377 35 22.96774659168419 24.392842890580113 29.056440634313258 23.58296988342244 36 29.745108638739755 24.720372346296774 26.014782340438174 19.519736674525298 37 22.840385818236363 29.58866715535467 28.706835311198976 18.86411171520999 38 22.445638176533354 31.69231335278651 24.100337647561606 21.761710823118527 39 22.555663733595225 29.410928120409707 26.614368559436443 21.41903958655863 40 24.922663708123068 24.627115957738866 26.52705567363943 23.92316466049863 41 19.167088844045317 23.48900593501204 27.843541535178463 29.50036368576418 42 23.434099290458978 25.31861420157531 25.53795775584657 25.70932875211914 43 22.771752512545035 24.938796072759793 27.37492464487571 24.91452676981946 44 21.499489141786505 28.60657408010144 27.70691172766304 22.187025050449016 45 19.390960781372495 32.67412340409875 24.484259623521552 23.450656191007198 46 23.815757074890964 29.8273978495841 26.29073068290847 20.06611439261647 47 23.610069425772725 26.72354504467533 27.433156820735466 22.23322870881648 48 23.887149864006997 23.98408556379784 29.165192583640646 22.963571988554513 49 22.325777537521898 22.437005946333 31.594528581172682 23.64268793497242 50 21.092500714635452 28.705561703464493 28.006421813221184 22.195515768678874 51 20.781598915452257 29.6835509315733 25.1728568719628 24.36199328101164 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1799.0 1 2385.5 2 2972.0 3 7232.5 4 11493.0 5 8350.5 6 5208.0 7 5620.0 8 6032.0 9 6419.5 10 6807.0 11 7149.5 12 7492.0 13 7453.0 14 7414.0 15 7440.0 16 7466.0 17 7119.5 18 6773.0 19 6741.0 20 6709.0 21 6131.0 22 5553.0 23 6054.0 24 6555.0 25 7063.0 26 8925.5 27 10280.0 28 12537.0 29 14794.0 30 16696.0 31 18598.0 32 21026.0 33 23454.0 34 26016.0 35 28578.0 36 29447.5 37 30317.0 38 38964.0 39 47611.0 40 65419.0 41 83227.0 42 98821.5 43 114416.0 44 118628.0 45 122840.0 46 121546.0 47 120252.0 48 121838.5 49 123425.0 50 122655.5 51 121886.0 52 114024.0 53 106162.0 54 90445.5 55 74729.0 56 68385.0 57 62041.0 58 58055.5 59 54070.0 60 50524.5 61 46979.0 62 41137.5 63 35296.0 64 31409.5 65 27523.0 66 23637.5 67 19752.0 68 16255.5 69 12759.0 70 10632.0 71 8505.0 72 7923.5 73 7342.0 74 5652.5 75 3203.5 76 2444.0 77 1689.0 78 934.0 79 825.0 80 716.0 81 500.5 82 285.0 83 242.0 84 199.0 85 120.0 86 41.0 87 30.0 88 19.0 89 16.0 90 13.0 91 9.0 92 5.0 93 5.5 94 6.0 95 4.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1413308.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.953093370266945 #Duplication Level Percentage of deduplicated Percentage of total 1 81.28339509260437 18.65705357012846 2 7.263289655945101 3.3342993129640397 3 2.3326714520567324 1.6062607692364308 4 1.1532739746930492 1.0588482089051374 5 0.7229830138304644 0.8297348310783823 6 0.504538362922135 0.6948429691820036 7 0.37243867152388 0.5984033721530059 8 0.3138398429028765 0.5762876173967707 9 0.249633589525405 0.5156876779858363 >10 3.314705440745061 19.14475241994688 >50 1.7868462853190457 29.730290993424223 >100 0.6963350677320406 21.51243155377662 >500 0.004139165926161405 0.6296749227725068 >1k 0.0015919868946774633 0.6496994038356064 >5k 3.183973789354927E-4 0.4617323772141015 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6318 0.44703631480186906 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4111 0.2908778553577847 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10379903035997814 0.0 2 0.0 0.0 0.0 0.32774172367240545 0.0 3 0.0 0.0 0.0 0.4812114556770357 0.0 4 0.0 0.0 0.0 0.7849669003501006 0.0 5 0.0 0.0 0.0 1.2711312749945518 0.0 6 0.0 0.0 0.0 1.9687852895476428 0.0 7 0.0 0.0 0.0 2.346905274717188 0.0 8 0.0 0.0 0.0 3.446453285483419 0.0 9 0.0 0.0 0.0 3.9823591177577713 0.0 10 0.0 0.0 0.0 4.841690558604352 0.0 11 0.0 0.0 0.0 5.478494425843482 0.0 12 0.0 0.0 0.0 6.061169964367286 0.0 13 0.0 0.0 0.0 6.306905501136341 0.0 14 0.0 0.0 0.0 6.396270310505566 0.0 15 7.07559852487922E-5 0.0 0.0 6.520305552646699 0.0 16 7.07559852487922E-5 0.0 0.0 6.786418813167406 0.0 17 7.07559852487922E-5 0.0 0.0 7.065692686944389 0.0 18 7.07559852487922E-5 0.0 0.0 7.53721057264234 0.0 19 7.07559852487922E-5 0.0 0.0 7.706954181254193 0.0 20 7.07559852487922E-5 0.0 0.0 7.900896336821131 0.0 21 7.07559852487922E-5 0.0 0.0 8.129155145233735 0.0 22 7.07559852487922E-5 0.0 0.0 8.344607120316308 0.0 23 7.07559852487922E-5 0.0 0.0 8.578809431489809 0.0 24 7.07559852487922E-5 0.0 0.0 8.764826916708884 0.0 25 7.07559852487922E-5 0.0 0.0 8.915324897333065 0.0 26 7.07559852487922E-5 0.0 0.0 9.059313327314358 0.0 27 7.07559852487922E-5 0.0 0.0 9.204504609044879 0.0 28 7.07559852487922E-5 0.0 0.0 9.338162665179848 0.0 29 7.07559852487922E-5 0.0 0.0 9.495240952432166 0.0 30 7.07559852487922E-5 0.0 0.0 9.718617597862604 0.0 31 7.07559852487922E-5 0.0 0.0 9.892323541648388 0.0 32 7.07559852487922E-5 0.0 0.0 10.06086429851101 0.0 33 7.07559852487922E-5 0.0 0.0 10.22898051946214 0.0 34 7.07559852487922E-5 0.0 0.0 10.40537519068738 0.0 35 7.07559852487922E-5 0.0 0.0 10.612336447540097 0.0 36 7.07559852487922E-5 0.0 0.0 10.789792458544069 0.0 37 7.07559852487922E-5 0.0 0.0 10.968805101223513 0.0 38 7.07559852487922E-5 0.0 0.0 11.1335250348827 0.0 39 7.07559852487922E-5 0.0 0.0 11.314660357119608 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGATA 85 0.0 45.000004 6 TGTAACG 65 0.0 45.000004 1 ACAACGC 20 7.033837E-4 45.0 39 ATTAGCG 75 0.0 45.0 1 GATCGAC 25 3.8912614E-5 45.0 10 CCGTAAG 20 7.033837E-4 45.0 1 CTACGAA 150 0.0 45.0 11 GCGTAAT 20 7.033837E-4 45.0 1 GCGTAAG 45 3.8562575E-10 45.0 1 TGCGTTA 20 7.033837E-4 45.0 22 ACGTTAG 55 1.8189894E-12 44.999996 1 CGATCTA 30 2.165858E-6 44.999996 10 CGAATAT 150 0.0 43.5 14 GCAAGCG 70 0.0 41.785717 1 GCACCGT 70 0.0 41.785717 9 CGTTAGG 140 0.0 41.785717 2 CGTAAGG 140 0.0 41.785717 2 CGGTCTA 175 0.0 41.142857 31 TCTAGCG 55 6.184564E-11 40.90909 1 TAACGTG 50 1.0822987E-9 40.5 1 >>END_MODULE