##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546583_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 877143 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.38380172902252 31.0 31.0 33.0 30.0 34.0 2 31.753255740512095 31.0 31.0 34.0 30.0 34.0 3 31.872845134715774 31.0 31.0 34.0 30.0 34.0 4 35.637233609571076 37.0 35.0 37.0 33.0 37.0 5 35.55942759618443 37.0 35.0 37.0 33.0 37.0 6 35.60300315912001 37.0 35.0 37.0 33.0 37.0 7 35.954698378713616 37.0 35.0 37.0 35.0 37.0 8 34.62166260233508 37.0 35.0 37.0 33.0 37.0 9 36.90247428298464 39.0 37.0 39.0 33.0 39.0 10 36.841963055054876 39.0 37.0 39.0 32.0 39.0 11 36.77791648568135 39.0 37.0 39.0 32.0 39.0 12 36.36641345823885 38.0 35.0 39.0 32.0 39.0 13 36.22650354617206 39.0 35.0 39.0 32.0 39.0 14 37.29194213486284 39.0 35.0 41.0 32.0 41.0 15 37.494466694712266 39.0 35.0 41.0 32.0 41.0 16 37.55811880160932 39.0 35.0 41.0 33.0 41.0 17 37.46246507125976 39.0 35.0 41.0 32.0 41.0 18 37.40289667705266 39.0 35.0 41.0 32.0 41.0 19 37.353466880542854 39.0 35.0 41.0 32.0 41.0 20 37.21362537237372 39.0 35.0 41.0 32.0 41.0 21 37.10082392494724 39.0 35.0 41.0 32.0 41.0 22 36.98171107789722 39.0 35.0 41.0 32.0 41.0 23 36.912933238935956 39.0 35.0 41.0 31.0 41.0 24 36.76863863702954 38.0 35.0 41.0 31.0 41.0 25 36.66098914316138 38.0 35.0 41.0 31.0 41.0 26 36.52137906817931 38.0 35.0 41.0 31.0 41.0 27 36.4109899982101 38.0 35.0 40.0 31.0 41.0 28 36.42705123337928 38.0 35.0 40.0 31.0 41.0 29 36.37036720352326 38.0 35.0 40.0 30.0 41.0 30 36.31374473717512 38.0 35.0 40.0 30.0 41.0 31 36.215102896563046 38.0 35.0 40.0 30.0 41.0 32 36.11864200022117 38.0 35.0 40.0 30.0 41.0 33 35.998600000228016 38.0 35.0 41.0 30.0 41.0 34 35.86436077127675 38.0 35.0 41.0 29.0 41.0 35 35.75441632664229 38.0 35.0 41.0 29.0 41.0 36 35.60890527542259 38.0 35.0 40.0 28.0 41.0 37 35.555981179807624 38.0 35.0 40.0 28.0 41.0 38 35.44703657214388 38.0 34.0 40.0 27.0 41.0 39 35.37343397826808 38.0 34.0 40.0 27.0 41.0 40 35.214447359210524 38.0 34.0 40.0 27.0 41.0 41 35.1391688698422 37.0 34.0 40.0 26.0 41.0 42 35.07069428816054 37.0 34.0 40.0 26.0 41.0 43 34.97297247997191 37.0 34.0 40.0 26.0 41.0 44 34.84869171845412 37.0 34.0 40.0 26.0 41.0 45 34.71580346648152 36.0 34.0 40.0 26.0 41.0 46 34.64196943941866 36.0 34.0 40.0 25.0 41.0 47 34.56242368690168 36.0 34.0 40.0 25.0 41.0 48 34.48746555578737 36.0 34.0 40.0 25.0 41.0 49 34.41313332033659 36.0 34.0 40.0 25.0 41.0 50 34.30057356668183 35.0 34.0 40.0 24.0 41.0 51 33.94132883691713 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 3.0 13 5.0 14 8.0 15 31.0 16 75.0 17 203.0 18 430.0 19 814.0 20 1384.0 21 2255.0 22 3277.0 23 4833.0 24 7012.0 25 9457.0 26 12472.0 27 14562.0 28 16166.0 29 18074.0 30 21203.0 31 25669.0 32 31800.0 33 41378.0 34 67591.0 35 103085.0 36 71213.0 37 91488.0 38 129332.0 39 203141.0 40 178.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.93535261639209 23.819833254098818 27.0124711706073 14.232342958901798 2 32.41136279945231 25.605745015350973 28.434930222324066 13.547961962872645 3 29.662894191711043 25.669702659657545 30.113105844771038 14.554297303860375 4 26.25147780920557 28.233138724244505 29.60771504760341 15.90766841894651 5 22.98382361826977 32.63960380462479 28.910109298027802 15.466463279077642 6 21.55270007285015 41.173674075948846 26.411428923220043 10.862196927980957 7 85.81884595784268 4.8028656672857215 7.156985805051172 2.2213025698204283 8 82.81785296126174 6.9579304628777745 6.9708131969359615 3.2534033789245314 9 79.66488930539262 6.165927334539522 9.88903747735546 4.280145882712397 10 43.510351219812506 25.92918144475872 15.823987650816344 14.73647968461243 11 36.82808846448071 23.220501104152916 22.980517429883154 16.970893001483226 12 32.30716086202592 21.926983399514103 27.818839117452914 17.947016621007066 13 24.011934200010717 29.579783456061325 28.937014831105078 17.47126751282288 14 20.040517908710438 33.13040177029287 29.092405685275946 17.736674635720743 15 18.19828693838975 23.33325352878607 39.77629645337191 18.692163079452268 16 20.951315805974623 20.223270321942945 38.166638735075125 20.658775137007307 17 21.18753726587341 21.15139720661283 28.59225918692847 29.068806340585283 18 23.8142469357904 23.349556457726962 31.17769850526083 21.658498101221806 19 27.65375771111438 25.051331424864586 25.450012141691836 21.844898722329198 20 28.945337305319658 23.956527042910906 24.361934143007467 22.73620150876197 21 25.889165164631077 25.62535413267848 27.243106312197668 21.24237439049277 22 25.193269512496823 23.144344764764696 26.224002243647842 25.438383479090636 23 22.75717870404256 27.59436032665141 25.055777678212106 24.592683291093927 24 22.967178669840607 24.89046825888139 31.66644435399929 20.47590871727871 25 22.90652721392065 24.716494345847824 29.031412209867717 23.345566230363808 26 20.52173932870695 28.107047539568804 26.867568914076724 24.503644217647523 27 21.67651112760405 26.999474430053024 28.04240585628569 23.281608586057235 28 20.46849829503285 25.803432279571293 32.422421429573056 21.305647995822802 29 21.33506167181406 24.811347750594827 30.378284954676715 23.475305622914394 30 22.69139695579854 25.9976993489089 29.653431652535563 21.657472042756996 31 27.649767483751226 25.49128249327647 24.552324991478013 22.306625031494296 32 27.061835983414333 25.31901867768425 25.16157570658376 22.45756963231765 33 26.569897952785347 25.320386755637337 24.993188111858615 23.1165271797187 34 21.573335248642465 26.723350696522687 27.372161665771717 24.331152389063128 35 22.783628211135472 25.632764554924343 28.487601223517718 23.096006010422474 36 27.23159165609256 26.34747127891347 25.072080607152998 21.348856457840967 37 22.452439339993592 29.008154884665327 27.00369267040836 21.535713104932718 38 22.822960452286573 30.266216569020106 24.769507366529744 22.14131561216358 39 21.796673974483067 28.205321139198514 26.280549465708557 23.717455420609866 40 23.613025470191292 25.379214107619852 27.520712130177177 23.48704829201168 41 20.67006178012023 24.444588852672826 28.39799211759086 26.487357249616082 42 23.857569404304655 25.957341049292985 25.421510517669297 24.76357902873306 43 23.685761614696805 25.230093610733938 27.099686140116262 23.98445863445299 44 22.323840012403906 27.5366730396298 27.475337544733296 22.664149403232997 45 21.35056655528232 28.795646775953294 26.083888259953053 23.769898408811336 46 24.151592157721147 27.21551674014385 26.90325294735294 21.72963815478206 47 23.686445653673346 26.689262754191734 27.17994671336373 22.44434487877119 48 23.393562965217757 25.40862778361111 27.9508586399253 23.24695061124583 49 22.477178749645155 24.44094064479794 28.567633783773 24.514246821783907 50 21.576755443525172 26.884099856009797 28.58325267373735 22.955892026727685 51 21.70683685556403 28.075581746647927 26.197324723562748 24.020256674225298 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 938.0 1 1248.5 2 1559.0 3 4621.0 4 7683.0 5 5487.5 6 3292.0 7 3424.5 8 3557.0 9 3903.5 10 4250.0 11 4321.0 12 4392.0 13 4453.5 14 4515.0 15 4305.0 16 4095.0 17 4158.0 18 4221.0 19 4012.0 20 3803.0 21 3817.0 22 3831.0 23 4042.5 24 4254.0 25 4518.0 26 5759.5 27 6737.0 28 7266.0 29 7795.0 30 8856.0 31 9917.0 32 12038.0 33 14159.0 34 15720.0 35 17281.0 36 19351.0 37 21421.0 38 24947.5 39 28474.0 40 35050.0 41 41626.0 42 49078.5 43 56531.0 44 61386.0 45 66241.0 46 70515.5 47 74790.0 48 72823.0 49 70856.0 50 66772.0 51 62688.0 52 58845.0 53 55002.0 54 52007.0 55 49012.0 56 47519.0 57 46026.0 58 43855.0 59 41684.0 60 39966.0 61 38248.0 62 34753.0 63 31258.0 64 28462.5 65 25667.0 66 22484.0 67 19301.0 68 16389.0 69 13477.0 70 11419.0 71 9361.0 72 7822.0 73 6283.0 74 5187.5 75 3072.5 76 2053.0 77 1542.0 78 1031.0 79 802.0 80 573.0 81 413.5 82 254.0 83 163.5 84 73.0 85 52.0 86 31.0 87 24.5 88 18.0 89 12.5 90 7.0 91 5.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 877143.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.10229756231564 #Duplication Level Percentage of deduplicated Percentage of total 1 77.29728201102193 21.722312198319667 2 6.1687173598949 3.4671026165117724 3 2.4824538786909747 2.0928797275109523 4 1.5286702836601964 1.718365887443532 5 1.079510578883338 1.5168363754723588 6 0.8808177702244872 1.4851801846214348 7 0.6846455289399958 1.3468078665286523 8 0.587097464246885 1.3199030110677545 9 0.5397159897608115 1.3650533409058223 >10 8.31679841986793 54.27677560416506 >50 0.39378475397823953 6.759100379438074 >100 0.03800043747994638 1.9575421157819899 >500 0.0016703489002174233 0.2924401985809435 >1k 8.351744501087116E-4 0.6797004936520163 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4508 0.5139412843743837 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1284 0.14638434097974903 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1400649609014721E-4 0.0 0.0 0.042068397057264326 0.0 2 2.2801299218029442E-4 0.0 0.0 0.1228990027851787 0.0 3 2.2801299218029442E-4 0.0 0.0 0.20156348508738028 0.0 4 2.2801299218029442E-4 0.0 0.0 0.34532567665705594 0.0 5 2.2801299218029442E-4 0.0 0.0 0.6038924097895098 0.0 6 2.2801299218029442E-4 0.0 0.0 1.089560083133537 0.0 7 2.2801299218029442E-4 0.0 0.0 1.3852929339913789 0.0 8 2.2801299218029442E-4 0.0 0.0 2.2753416489671583 0.0 9 2.2801299218029442E-4 0.0 0.0 2.765569582154791 0.0 10 2.2801299218029442E-4 0.0 0.0 3.432507584282152 0.0 11 2.2801299218029442E-4 0.0 0.0 3.8343804829999213 0.0 12 2.2801299218029442E-4 0.0 0.0 4.22086250474552 0.0 13 2.2801299218029442E-4 0.0 0.0 4.401448794552314 0.0 14 2.2801299218029442E-4 0.0 0.0 4.474070932561737 0.0 15 2.2801299218029442E-4 0.0 0.0 4.546921083563341 0.0 16 2.2801299218029442E-4 0.0 0.0 4.694559496000082 0.0 17 2.2801299218029442E-4 0.0 0.0 4.842881947413364 0.0 18 2.2801299218029442E-4 0.0 0.0 5.1008786480653665 0.0 19 2.2801299218029442E-4 0.0 0.0 5.207360715413564 0.0 20 2.2801299218029442E-4 0.0 0.0 5.338126166428963 0.0 21 2.2801299218029442E-4 0.0 0.0 5.489184773748408 0.0 22 2.2801299218029442E-4 0.0 0.0 5.639901361579583 0.0 23 2.2801299218029442E-4 0.0 0.0 5.821741722843368 0.0 24 2.2801299218029442E-4 0.0 0.0 5.960031602600716 0.0 25 2.2801299218029442E-4 0.0 0.0 6.0733540597143225 0.0 26 2.2801299218029442E-4 0.0 0.0 6.190552737694994 0.0 27 2.2801299218029442E-4 0.0 0.0 6.310031545597468 0.0 28 2.2801299218029442E-4 0.0 0.0 6.429396347003852 0.0 29 2.2801299218029442E-4 0.0 0.0 6.558451700577899 0.0 30 2.2801299218029442E-4 0.0 0.0 6.747930497079723 0.0 31 2.2801299218029442E-4 0.0 0.0 6.898305065422628 0.0 32 2.2801299218029442E-4 0.0 0.0 7.03933110108614 0.0 33 2.2801299218029442E-4 0.0 0.0 7.192441825335208 0.0 34 2.2801299218029442E-4 0.0 0.0 7.345894569072546 0.0 35 3.4201948827044165E-4 0.0 0.0 7.520324508090471 0.0 36 3.4201948827044165E-4 0.0 0.0 7.663630673675786 0.0 37 3.4201948827044165E-4 0.0 0.0 7.810015014655535 0.0 38 3.4201948827044165E-4 0.0 0.0 7.9819368107594775 0.0 39 4.5602598436058885E-4 0.0 0.0 8.203565439158723 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 20 7.032372E-4 45.0 1 CGTATGT 20 7.032372E-4 45.0 18 CGTACTA 20 7.032372E-4 45.0 6 ATACCGG 20 7.032372E-4 45.0 2 TATGACG 60 3.6379788E-12 41.250004 1 ATAACGC 105 0.0 40.714287 11 CGTTTTT 2915 0.0 40.368782 1 TAGCATA 515 0.0 39.757282 30 TGGGATC 475 0.0 39.31579 6 GCGATGA 260 0.0 38.94231 9 CGGGTAT 35 6.246599E-6 38.571426 6 CGGTCTA 135 0.0 38.333332 31 TAGGGAT 770 0.0 38.27922 5 GTTGATC 560 0.0 38.16964 16 GCGATAT 130 0.0 38.076927 9 GTAGCAT 550 0.0 38.045456 29 ACGGGAT 225 0.0 38.0 5 CGTTCGG 315 0.0 37.857143 45 CATATGC 530 0.0 37.78302 33 GGTACCT 560 0.0 37.767857 8 >>END_MODULE