##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546581_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1328796 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.329343255097097 31.0 31.0 33.0 30.0 34.0 2 31.682678153757237 31.0 31.0 34.0 30.0 34.0 3 31.789110593349168 31.0 31.0 34.0 30.0 34.0 4 35.54568571850005 37.0 35.0 37.0 33.0 37.0 5 35.457821215596674 37.0 35.0 37.0 33.0 37.0 6 35.511547295446405 37.0 35.0 37.0 33.0 37.0 7 35.88124512716775 37.0 35.0 37.0 35.0 37.0 8 34.54384570694072 37.0 35.0 37.0 32.0 37.0 9 36.805751221406446 39.0 37.0 39.0 32.0 39.0 10 36.735931625320966 39.0 37.0 39.0 32.0 39.0 11 36.66644165093814 39.0 35.0 39.0 32.0 39.0 12 36.22782353348445 38.0 35.0 39.0 32.0 39.0 13 36.00710869087505 38.0 35.0 39.0 31.0 39.0 14 37.03370946330362 39.0 35.0 41.0 31.0 41.0 15 37.251091965960164 39.0 35.0 41.0 32.0 41.0 16 37.37077474646221 39.0 35.0 41.0 32.0 41.0 17 37.237318595179396 39.0 35.0 41.0 32.0 41.0 18 37.18673596248032 39.0 35.0 41.0 32.0 41.0 19 37.144522560272605 39.0 35.0 41.0 32.0 41.0 20 36.92217466036924 39.0 35.0 41.0 31.0 41.0 21 36.84689974984874 38.0 35.0 41.0 31.0 41.0 22 36.749882600489464 38.0 35.0 41.0 31.0 41.0 23 36.65868425251129 38.0 35.0 41.0 31.0 41.0 24 36.544547093760066 38.0 35.0 41.0 31.0 41.0 25 36.49582027640059 38.0 35.0 40.0 31.0 41.0 26 36.3380037266819 38.0 35.0 40.0 31.0 41.0 27 36.194156213594866 38.0 35.0 40.0 30.0 41.0 28 36.237907097854 38.0 35.0 40.0 30.0 41.0 29 36.20928720435643 38.0 35.0 40.0 30.0 41.0 30 36.17856390296178 38.0 35.0 40.0 30.0 41.0 31 36.07693280232632 38.0 35.0 40.0 30.0 41.0 32 35.912480170018576 38.0 35.0 40.0 30.0 41.0 33 35.772452656389696 38.0 35.0 40.0 29.0 41.0 34 35.62636552187093 38.0 35.0 40.0 28.0 41.0 35 35.4875827440781 38.0 35.0 40.0 27.0 41.0 36 35.35672894861213 38.0 35.0 40.0 27.0 41.0 37 35.29955087161611 38.0 34.0 40.0 27.0 41.0 38 35.210186514709555 38.0 34.0 40.0 26.0 41.0 39 35.135059106138186 38.0 34.0 40.0 26.0 41.0 40 35.01128389910867 37.0 34.0 40.0 25.0 41.0 41 34.93282941851119 37.0 34.0 40.0 25.0 41.0 42 34.87997706194179 37.0 34.0 40.0 25.0 41.0 43 34.775410220982 37.0 34.0 40.0 24.0 41.0 44 34.69193766387015 37.0 34.0 40.0 24.0 41.0 45 34.61535706007544 37.0 34.0 40.0 24.0 41.0 46 34.55303522888389 37.0 34.0 40.0 24.0 41.0 47 34.45600679111015 36.0 34.0 40.0 24.0 41.0 48 34.4113197210106 36.0 34.0 40.0 23.0 41.0 49 34.37948789731456 36.0 34.0 40.0 24.0 41.0 50 34.238152432728576 36.0 34.0 40.0 24.0 41.0 51 33.885078672723274 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 5.0 11 4.0 12 4.0 13 6.0 14 13.0 15 53.0 16 117.0 17 332.0 18 725.0 19 1445.0 20 2491.0 21 4276.0 22 6460.0 23 9326.0 24 12135.0 25 16498.0 26 20790.0 27 23452.0 28 25136.0 29 27967.0 30 33387.0 31 40153.0 32 50179.0 33 64544.0 34 106010.0 35 162966.0 36 100915.0 37 125925.0 38 178650.0 39 314524.0 40 306.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.27298697467482 23.499318179765744 26.25113260425227 13.97656224130717 2 31.818653879150748 26.73781378029434 27.59370136574764 13.84983097480727 3 29.04682133299619 26.541320112342298 30.52078723897423 13.891071315687284 4 25.52491127306223 26.920610838684038 31.953362291879266 15.601115596374463 5 24.32367346078706 31.005436500410898 29.02304040650333 15.647849632298714 6 20.276626359501385 41.27405561124507 27.354612747178646 11.094705282074901 7 82.21690914180958 4.759797591202863 10.617054837612395 2.4062384293751635 8 78.8555203357024 8.251755724731261 8.503186343125657 4.389537596440688 9 75.85287734159344 5.744674126050951 11.927564502000306 6.474884030355299 10 43.673520991935554 23.00353101604761 18.079449366193156 15.243498625823678 11 37.2309970830737 23.618147556133522 24.10385040292114 15.047004957871637 12 32.23180984891586 21.19384766359923 27.747524826986236 18.826817660498676 13 23.54876143516386 30.734890833506423 30.099202586401525 15.617145144928191 14 18.317710167700685 35.21518728232174 29.96133341762016 16.50576913235741 15 16.334486256731658 24.050945367084186 42.69172995704382 16.922838419140334 16 18.79438228290874 21.36979641720776 39.13655670245846 20.69926459742504 17 19.391539408607493 22.33405278161584 29.878100174895167 28.396307634881502 18 21.37205410010265 23.595420214991616 33.547662696155015 21.48486298875072 19 26.031836339061826 26.037932082878037 26.8238314985897 21.10640007947044 20 27.6859653400522 24.986002366051675 26.162179898193553 21.165852395702576 21 22.780772970418333 28.730670471614907 29.456741290611955 19.03181526735481 22 22.629432960364117 23.631618397406374 28.3382099283863 25.400738713843207 23 20.757663328306226 28.87764562807233 26.778075791919903 23.58661525170154 24 20.462283149557944 25.7977146228616 33.43206933193658 20.307932895643876 25 19.813425085566184 26.458764174485776 30.86395503899771 22.863855700950335 26 17.74659165138968 29.57293670360236 29.393074632976017 23.287397012031942 27 20.97440088621579 28.23676471030918 29.204106574673617 21.584727828801412 28 17.919454905041857 27.144497725760765 34.40716257424014 20.52888479495724 29 19.513228516642133 24.38470615504562 33.5958265979127 22.50623873039955 30 20.84571296120699 27.156538701200184 30.975936110584318 21.02181222700851 31 24.73600161349071 24.9127781841607 27.39111195397939 22.960108248369202 32 26.357469468601654 25.84316930514541 27.658346352638024 20.141014873614914 33 24.759556771694076 24.756697040027213 28.301710721585554 22.182035466693158 34 19.088784132402566 25.68219651473966 30.442219874232013 24.786799478625763 35 19.5866032107261 25.050120560266585 31.787798879587235 23.575477349420076 36 25.130343559131724 25.15344718075611 28.54983007173411 21.166379188378052 37 19.425254139837868 27.763027582864485 30.80766347881842 22.004054798479224 38 20.520982904825118 29.446957998067425 26.14125870336756 23.890800393739898 39 20.13108106887739 26.69815381744075 29.02221258944187 24.14855252423999 40 22.025277017691202 24.24969671793112 28.324061782244982 25.4009644821327 41 18.636419736362843 23.32630441392057 29.213889867218146 28.82338598249844 42 22.10407015072291 24.614989810324534 28.001890433143988 25.279049605808567 43 21.672325925123197 24.649682870809364 29.476608900086998 24.201382303980445 44 21.257740089524653 26.88253125385687 29.33437487770884 22.52535377890963 45 18.953323158709086 28.396232378785008 27.980818726125 24.669625736380905 46 22.883798566521875 27.669333742726497 28.09362761477307 21.353240075978555 47 21.20438351710872 25.63598927149088 29.922426015731535 23.23720119566886 48 22.276030331217132 24.18031059696146 29.807284188092076 23.73637488372933 49 21.56937558511615 22.32005514766751 31.98421729144278 24.12635197577356 50 20.509393465964678 26.57909867278348 29.463740107586116 23.447767753665723 51 20.063425838127145 28.040195786260647 26.91752533872769 24.97885303688452 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1649.0 1 2061.0 2 2473.0 3 7717.5 4 12962.0 5 9156.5 6 5351.0 7 5699.0 8 6047.0 9 6458.5 10 6870.0 11 7050.5 12 7231.0 13 7208.0 14 7185.0 15 7016.0 16 6847.0 17 6594.0 18 6341.0 19 6278.5 20 6216.0 21 6438.0 22 6660.0 23 6974.0 24 7288.0 25 8080.5 26 9447.5 27 10022.0 28 11534.0 29 13046.0 30 14711.5 31 16377.0 32 20596.0 33 24815.0 34 26863.0 35 28911.0 36 31298.0 37 33685.0 38 40468.0 39 47251.0 40 60808.0 41 74365.0 42 89095.5 43 103826.0 44 121055.5 45 138285.0 46 135711.0 47 133137.0 48 122956.0 49 112775.0 50 104544.0 51 96313.0 52 88140.0 53 79967.0 54 73610.5 55 67254.0 56 61369.5 57 55485.0 58 51915.5 59 48346.0 60 44436.5 61 40527.0 62 36353.5 63 32180.0 64 29339.0 65 26498.0 66 22376.0 67 18254.0 68 15340.0 69 12426.0 70 10757.0 71 9088.0 72 7592.0 73 6096.0 74 4832.5 75 2776.5 76 1984.0 77 1551.5 78 1119.0 79 938.5 80 758.0 81 510.0 82 262.0 83 174.5 84 87.0 85 53.5 86 20.0 87 23.5 88 27.0 89 22.5 90 18.0 91 18.0 92 18.0 93 14.0 94 10.0 95 6.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1328796.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.299251091014664 #Duplication Level Percentage of deduplicated Percentage of total 1 80.31496954828407 21.92538520065803 2 6.662207054655285 3.637465264107277 3 2.3761497759720127 1.9460132809235464 4 1.2897545452296575 1.408373327040074 5 0.8640377403020703 1.179379161230957 6 0.6616298009956757 1.083719884000741 7 0.5042357624566058 0.9635681081860475 8 0.40149666093862924 0.8768446527334094 9 0.3565907805105066 0.8761195128507495 >10 5.152951563669192 35.70629055496822 >50 1.322241388257652 23.79540730039495 >100 0.0869182602759354 3.5881285054345997 >500 0.003692605828525903 0.6631442737101224 >1k 0.0028404660219430024 1.7639389544384783 >5k 2.840466021943002E-4 0.5862220193227929 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7560 0.5689360895126114 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCG 4724 0.35550979984888575 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTC 4687 0.35272532427851977 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGC 2636 0.19837507036445023 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2344 0.17640029018750808 No Hit GCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC 1837 0.13824544926384486 No Hit GAACTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCT 1509 0.11356144961303316 No Hit CTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCT 1498 0.11273363255157301 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5051219299275434E-4 0.0 0.0 0.11965719342923971 0.0 2 1.5051219299275434E-4 0.0 0.0 0.4276051402924151 0.0 3 1.5051219299275434E-4 0.0 0.0 0.6256039301743834 0.0 4 1.5051219299275434E-4 0.0 0.0 1.1091243501636068 0.0 5 1.5051219299275434E-4 0.0 0.0 2.05546976360555 0.0 6 1.5051219299275434E-4 0.0 0.0 2.980969238317996 0.0 7 1.5051219299275434E-4 0.0 0.0 3.5583340106382018 0.0 8 1.5051219299275434E-4 0.0 0.0 5.02928967275639 0.0 9 1.5051219299275434E-4 0.0 0.0 5.669568541747567 0.0 10 1.5051219299275434E-4 0.0 0.0 7.0244793030683415 0.0 11 1.5051219299275434E-4 0.0 0.0 7.717362183510486 0.0 12 1.5051219299275434E-4 0.0 0.0 8.577313598174587 0.0 13 1.5051219299275434E-4 0.0 0.0 8.8678773867471 0.0 14 1.5051219299275434E-4 0.0 0.0 8.990770592325685 0.0 15 1.5051219299275434E-4 0.002257682894891315 0.0 9.191779626067508 0.0 16 1.5051219299275434E-4 0.002257682894891315 0.0 9.510112914247182 0.0 17 1.5051219299275434E-4 0.002257682894891315 0.0 9.812266141680137 0.0 18 1.5051219299275434E-4 0.002257682894891315 0.0 10.299850390880165 0.0 19 1.5051219299275434E-4 0.002257682894891315 0.0 10.552635619011497 0.0 20 1.5051219299275434E-4 0.002257682894891315 0.0 10.770125737886026 0.0 21 1.5051219299275434E-4 0.002257682894891315 0.0 11.02118007579794 0.0 22 1.5051219299275434E-4 0.002257682894891315 0.0 11.278856950201536 0.0 23 1.5051219299275434E-4 0.002257682894891315 0.0 11.553616958509808 0.0 24 1.5051219299275434E-4 0.002257682894891315 0.0 11.772386431024778 0.0 25 1.5051219299275434E-4 0.002257682894891315 0.0 11.95074337972119 0.0 26 1.5051219299275434E-4 0.002257682894891315 0.0 12.125488035785779 0.0 27 1.5051219299275434E-4 0.002257682894891315 0.0 12.315660191632125 0.0 28 1.5051219299275434E-4 0.002257682894891315 0.0 12.497177896381386 0.0 29 1.5051219299275434E-4 0.002257682894891315 0.0 12.69653129600029 0.0 30 1.5051219299275434E-4 0.002257682894891315 0.0 12.95428342650038 0.0 31 1.5051219299275434E-4 0.002257682894891315 0.0 13.179524923314037 0.0 32 1.5051219299275434E-4 0.002257682894891315 0.0 13.385651371617614 0.0 33 1.5051219299275434E-4 0.002257682894891315 0.0 13.591476795535206 0.0 34 1.5051219299275434E-4 0.002257682894891315 0.0 13.799635158444186 0.0 35 1.5051219299275434E-4 0.002257682894891315 0.0 14.031047655170545 0.0 36 1.5051219299275434E-4 0.002257682894891315 0.0 14.236572054702151 0.0 37 1.5051219299275434E-4 0.002257682894891315 0.0 14.449998344365877 0.0 38 1.5051219299275434E-4 0.002257682894891315 0.0 14.682765450829171 0.0 39 1.5051219299275434E-4 0.002257682894891315 0.0 14.997335934184028 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 85 0.0 45.000004 1 CGCACAT 25 3.8911356E-5 45.0 28 TAAATCG 20 7.0336845E-4 45.0 35 TTCGACT 20 7.0336845E-4 45.0 27 CGGTCTA 210 0.0 43.92857 31 CGTAAGG 230 0.0 42.06522 2 CGTTTTT 5045 0.0 41.43211 1 GCGTAAG 120 0.0 41.250004 1 CACGACG 225 0.0 40.0 26 ATAGGGT 405 0.0 39.444447 4 ATAGACG 40 3.458772E-7 39.375 1 TCACGAC 245 0.0 38.57143 25 CTCACGA 245 0.0 38.57143 24 TAATCGG 35 6.249027E-6 38.571426 2 TACGGGT 100 0.0 38.25 4 TAAGGGA 915 0.0 38.11475 4 GCGCGAC 480 0.0 37.968754 9 GATGAAT 1055 0.0 37.962086 20 CGATGAA 1030 0.0 37.79126 19 ACCCGCT 460 0.0 37.663044 34 >>END_MODULE