##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546575_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2677009 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.444863651933932 31.0 31.0 33.0 30.0 34.0 2 31.809383158592293 31.0 31.0 34.0 30.0 34.0 3 31.886116931246775 31.0 31.0 34.0 30.0 34.0 4 35.663104606671105 37.0 35.0 37.0 33.0 37.0 5 35.60296958284414 37.0 35.0 37.0 33.0 37.0 6 35.649122584197514 37.0 35.0 37.0 33.0 37.0 7 35.99848637042311 37.0 35.0 37.0 35.0 37.0 8 34.6535738206334 37.0 35.0 37.0 33.0 37.0 9 36.94178129397398 39.0 37.0 39.0 33.0 39.0 10 36.883871888364965 39.0 37.0 39.0 32.0 39.0 11 36.836437606298674 39.0 37.0 39.0 32.0 39.0 12 36.56800780273806 39.0 35.0 39.0 32.0 39.0 13 36.48130955106987 39.0 35.0 39.0 32.0 39.0 14 37.590611387559775 40.0 36.0 41.0 32.0 41.0 15 37.739850332964885 40.0 36.0 41.0 33.0 41.0 16 37.78020245729469 40.0 36.0 41.0 33.0 41.0 17 37.679503132040274 40.0 36.0 41.0 33.0 41.0 18 37.584522876090446 39.0 36.0 41.0 33.0 41.0 19 37.49923515386015 39.0 36.0 41.0 32.0 41.0 20 37.3457810563954 39.0 35.0 41.0 32.0 41.0 21 37.241143380541494 39.0 35.0 41.0 32.0 41.0 22 37.15429944389429 39.0 35.0 41.0 32.0 41.0 23 37.07754101685874 39.0 35.0 41.0 32.0 41.0 24 36.93187695670803 39.0 35.0 41.0 31.0 41.0 25 36.830546703429086 38.0 35.0 41.0 31.0 41.0 26 36.713614709550846 38.0 35.0 41.0 31.0 41.0 27 36.592336447131856 38.0 35.0 41.0 31.0 41.0 28 36.60111938361059 38.0 35.0 41.0 31.0 41.0 29 36.54626712125361 38.0 35.0 41.0 31.0 41.0 30 36.48918102255166 38.0 35.0 41.0 31.0 41.0 31 36.36414744963502 38.0 35.0 41.0 30.0 41.0 32 36.24188637393449 38.0 35.0 41.0 30.0 41.0 33 36.062166021854985 38.0 35.0 41.0 30.0 41.0 34 35.860210780016054 38.0 35.0 41.0 29.0 41.0 35 35.72074692315192 38.0 35.0 41.0 28.0 41.0 36 35.59275108899522 38.0 35.0 41.0 27.0 41.0 37 35.54300639258217 38.0 35.0 41.0 27.0 41.0 38 35.43613301262715 38.0 35.0 41.0 27.0 41.0 39 35.353438856574634 38.0 35.0 40.0 26.0 41.0 40 35.22499774935385 38.0 34.0 40.0 26.0 41.0 41 35.14569655910757 38.0 34.0 40.0 25.0 41.0 42 35.06721979642205 38.0 34.0 40.0 25.0 41.0 43 34.96453280508209 38.0 34.0 40.0 25.0 41.0 44 34.84370653964929 37.0 34.0 40.0 24.0 41.0 45 34.718454812815345 37.0 34.0 40.0 24.0 41.0 46 34.644888007474016 37.0 34.0 40.0 24.0 41.0 47 34.56640302666147 37.0 34.0 40.0 23.0 41.0 48 34.480006977936945 37.0 34.0 40.0 23.0 41.0 49 34.40584697324514 36.0 34.0 40.0 24.0 41.0 50 34.294177569070555 36.0 34.0 40.0 24.0 41.0 51 33.93020083234685 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 4.0 11 7.0 12 7.0 13 13.0 14 36.0 15 88.0 16 222.0 17 533.0 18 1219.0 19 2350.0 20 4153.0 21 6879.0 22 10185.0 23 15157.0 24 21741.0 25 31706.0 26 42291.0 27 48132.0 28 51032.0 29 54813.0 30 62800.0 31 74521.0 32 91831.0 33 117696.0 34 189027.0 35 278965.0 36 211184.0 37 277716.0 38 402698.0 39 679478.0 40 522.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.24198088239524 22.950427137151948 26.010558799017858 15.797033181434953 2 34.986845393497 24.59020496382343 27.374058137271856 13.048891505407715 3 29.788992117695535 24.872721757752775 31.472998409792417 13.865287714759269 4 25.964611997942477 27.759749780445265 30.679015274136173 15.596622947476083 5 23.040340917792953 31.065976991485645 30.420816665166235 15.472865425555163 6 21.573069048329685 39.707972591799276 28.122542733326632 10.5964156265444 7 84.36452772478539 4.1472778014567755 9.30183648990347 2.1863579838543687 8 81.53614724492894 6.711632273182495 8.837736443919313 2.914484037969241 9 78.70436744889538 5.495312118861012 11.41736916088067 4.382951271362927 10 40.411108068743886 25.708990892447503 18.459146009595038 15.420755029213574 11 32.971499161937814 25.01851880214075 25.147169845151808 16.862812190769624 12 29.295194749065097 22.695142227762403 29.375172067034516 18.634490956137988 13 23.90085352720144 27.35015085866353 30.73370317395272 18.015292440182307 14 20.035868388937057 30.503446196856267 31.198064705796657 18.262620708410022 15 19.008639866358312 23.819419359441824 39.02004064984466 18.1519001243552 16 20.99649272751791 21.968995995157282 36.943506727097294 20.091004550227513 17 21.768884602181014 21.978633616846263 30.27995049699123 25.972531283981485 18 24.02121173294524 23.150687950619517 32.34057113741493 20.487529179020317 19 26.78634998985808 24.669323113967863 27.982498377853794 20.56182851832026 20 27.708386486560187 24.053972175663212 27.02019305874579 21.217448279030815 21 25.46326889450129 25.54130374608378 29.544017222205827 19.451410137209102 22 24.68217327621984 22.993086687418682 28.695047345750424 23.62969269061105 23 22.53836277726373 27.21649422919385 27.729043869482695 22.516099124059725 24 22.672654443821443 24.45423231673857 32.18890933874335 20.684203900696634 25 22.29125863977297 25.33939930721189 30.380996104234242 21.988345948780896 26 20.842664331722453 27.815035362227025 28.66404259380525 22.67825771224527 27 21.568661143836273 26.345410120025747 29.97942853385999 22.10650020227799 28 20.488575122459434 26.148660688103774 32.71961356872539 20.6431506207114 29 21.682556913331258 24.76898658166633 32.11774782976075 21.43070867524166 30 22.70638611973288 25.51803150456349 30.89608589287522 20.87949648282841 31 25.67100073253396 24.529166693126545 28.09011848671409 21.709714087625407 32 26.517990787479604 25.42505460385079 27.645966076318757 20.410988532350842 33 25.488483602408508 25.026662218916705 27.798300267201192 21.686553911473588 34 22.205752763625377 26.03842572064569 29.82705698785473 21.928764527874208 35 23.293160389076018 25.608356191555576 29.703187400565334 21.395296018803077 36 26.436145713368912 25.338614849632556 27.576261417126354 20.648978019872178 37 23.218898404898898 27.708909458279745 28.54443149051796 20.527760646303392 38 23.115574135163534 28.423886509160035 26.680971188367312 21.77956816730911 39 22.724279223566302 27.07779465814272 27.551607036061515 22.646319082229457 40 23.807204234277883 25.32173033411543 28.21006578610681 22.660999645499885 41 20.90396408827912 25.4533324318297 28.850482011827378 24.7922214680638 42 23.807540430383312 26.663488990884975 26.916980854378895 22.611989724352814 43 22.93993034763798 26.02135442951443 28.07319661607413 22.965518606773454 44 22.917143722714417 27.18029711517593 28.025867675454208 21.876691486655442 45 21.485060378952777 27.911112738134236 27.49501402498086 23.10881285793212 46 23.28456871082615 26.76337658932039 28.300091632116292 21.651963067737164 47 23.21691858338915 26.263714466406352 28.6673298446139 21.852037105590604 48 23.13342988387413 24.96891119902847 29.521604148510523 22.37605476858688 49 22.391893340664897 24.619715510855585 29.587199744192116 23.401191404287395 50 21.67164921746621 27.34690096297771 28.726575069415155 22.25487475014092 51 22.07004160240029 27.992472195648205 27.08541510319913 22.852071098752376 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2477.0 1 3509.5 2 4542.0 3 19976.5 4 35411.0 5 24867.5 6 14324.0 7 14517.5 8 14711.0 9 15555.0 10 16399.0 11 16259.5 12 16120.0 13 16006.5 14 15893.0 15 15621.0 16 15349.0 17 14555.5 18 13762.0 19 14145.5 20 14529.0 21 14125.5 22 13722.0 23 14468.5 24 15215.0 25 17185.0 26 21143.5 27 23132.0 28 24569.0 29 26006.0 30 32918.5 31 39831.0 32 44647.0 33 49463.0 34 55855.0 35 62247.0 36 68184.0 37 74121.0 38 83740.5 39 93360.0 40 112755.0 41 132150.0 42 149501.0 43 166852.0 44 174145.0 45 181438.0 46 194274.0 47 207110.0 48 210476.5 49 213843.0 50 208151.5 51 202460.0 52 190160.5 53 177861.0 54 163932.5 55 150004.0 56 140893.5 57 131783.0 58 125473.5 59 119164.0 60 111134.0 61 103104.0 62 96433.5 63 89763.0 64 81121.5 65 72480.0 66 61483.0 67 50486.0 68 42374.5 69 34263.0 70 29762.5 71 25262.0 72 21289.0 73 17316.0 74 13693.0 75 7899.0 76 5728.0 77 4682.5 78 3637.0 79 2469.5 80 1302.0 81 967.5 82 633.0 83 437.5 84 242.0 85 181.0 86 120.0 87 86.0 88 52.0 89 72.5 90 93.0 91 53.0 92 13.0 93 9.0 94 5.0 95 5.5 96 6.0 97 3.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2677009.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.01755112613924 #Duplication Level Percentage of deduplicated Percentage of total 1 79.88721756847585 18.38808114707402 2 6.468102047646101 2.9775973914156006 3 2.221791409256964 1.5342059206256735 4 1.2398438345778064 1.1415267540329272 5 0.841616793121577 0.9685978782146625 6 0.6004243575479998 0.8292179008344235 7 0.5023990949148246 0.8094797797049638 8 0.40774377005441675 0.7508210458873839 9 0.35161627042701143 0.7284010933202523 >10 5.186409414059119 30.317137174032716 >50 2.0529465886073366 32.42872399697694 >100 0.23366910677776964 7.085397904120749 >500 0.004034428886404035 0.6066641051823597 >1k 0.0020172144432020174 0.637734407909666 >5k 0.0 0.0 >10k+ 1.6810120360016812E-4 0.7964135006676771 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20583 0.7688804931175054 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3347 0.12502759609698735 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.471024565102321E-5 0.0 0.0 0.047739846971003835 0.0 2 7.471024565102321E-5 0.0 0.0 0.15341748944437616 0.0 3 7.471024565102321E-5 0.0 0.0 0.27306594785448984 0.0 4 7.471024565102321E-5 0.0 0.0 0.41568780680229317 0.0 5 7.471024565102321E-5 0.0 0.0 0.7249135135518783 0.0 6 7.471024565102321E-5 0.0 0.0 1.2394056202276496 0.0 7 7.471024565102321E-5 0.0 0.0 1.5136295768897303 0.0 8 7.471024565102321E-5 0.0 0.0 2.1561003343657044 0.0 9 7.471024565102321E-5 0.0 0.0 2.5396627355380574 0.0 10 7.471024565102321E-5 0.0 0.0 3.1455254726450304 0.0 11 7.471024565102321E-5 0.0 0.0 3.5261741742369934 0.0 12 7.471024565102321E-5 0.0 0.0 3.900846056176875 0.0 13 7.471024565102321E-5 0.0 0.0 4.081121878932794 0.0 14 7.471024565102321E-5 0.0 0.0 4.166702465326041 0.0 15 7.471024565102321E-5 0.0 0.0 4.255570302527933 0.0 16 7.471024565102321E-5 0.0 0.0 4.402226514740891 0.0 17 7.471024565102321E-5 0.0 0.0 4.551647006042939 0.0 18 7.471024565102321E-5 0.0 0.0 4.786461308124104 0.0 19 1.1206536847653483E-4 0.0 0.0 4.901066824952774 0.0 20 1.1206536847653483E-4 0.0 0.0 5.0240772444171835 0.0 21 1.1206536847653483E-4 0.0 0.0 5.169538092699725 0.0 22 1.1206536847653483E-4 0.0 0.0 5.319108004493074 0.0 23 1.1206536847653483E-4 0.0 0.0 5.487206057207876 0.0 24 1.1206536847653483E-4 0.0 0.0 5.626690085838336 0.0 25 1.1206536847653483E-4 0.0 0.0 5.740174948982241 0.0 26 1.1206536847653483E-4 0.0 0.0 5.8503725613175 0.0 27 1.1206536847653483E-4 0.0 0.0 5.9677050021124325 0.0 28 1.1206536847653483E-4 0.0 0.0 6.090453935717063 0.0 29 1.1206536847653483E-4 0.0 0.0 6.222877846133502 0.0 30 1.1206536847653483E-4 0.0 0.0 6.410549983208872 0.0 31 1.1206536847653483E-4 0.0 0.0 6.554666047069696 0.0 32 1.1206536847653483E-4 0.0 0.0 6.708419732619502 0.0 33 1.1206536847653483E-4 0.0 0.0 6.854590328235728 0.0 34 1.1206536847653483E-4 0.0 0.0 7.003824043923648 0.0 35 1.4942049130204643E-4 0.0 0.0 7.1535807313311235 0.0 36 1.4942049130204643E-4 0.0 0.0 7.295455487822417 0.0 37 1.4942049130204643E-4 0.0 0.0 7.435537198418086 0.0 38 1.4942049130204643E-4 0.0 0.0 7.58738577270379 0.0 39 1.4942049130204643E-4 0.0 0.0 7.7805864679573356 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATACG 25 3.8922008E-5 45.0 1 TATCACG 30 2.1665892E-6 44.999996 1 CGTTTTT 13560 0.0 41.847343 1 GGGCGAT 5460 0.0 38.653847 7 GACCGAT 1580 0.0 38.164555 9 AGGGCGA 2740 0.0 37.445255 6 TACGGGT 225 0.0 37.000004 4 TAGGGAC 1785 0.0 36.80672 5 CGTTCGG 560 0.0 36.562504 45 CGACGGT 240 0.0 36.5625 28 CGGTCTA 240 0.0 36.5625 31 GGCGATA 1355 0.0 36.365314 8 TTAGGGA 2050 0.0 36.219513 4 CGTTAGG 400 0.0 36.0 2 TGGGCGA 1810 0.0 35.428173 6 CGTTCGA 210 0.0 35.357143 14 GGACCGA 1675 0.0 35.328358 8 TAGCGGG 1670 0.0 35.2994 3 TAGGGCG 1395 0.0 35.161293 5 GCGATAT 320 0.0 35.15625 9 >>END_MODULE