##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546572_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1288074 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.458504713238526 31.0 31.0 33.0 30.0 34.0 2 31.8230963438436 31.0 31.0 34.0 30.0 34.0 3 31.924554800422957 33.0 31.0 34.0 30.0 34.0 4 35.672630609732046 37.0 35.0 37.0 33.0 37.0 5 35.61138490490453 37.0 35.0 37.0 33.0 37.0 6 35.662282601775985 37.0 35.0 37.0 33.0 37.0 7 36.00910972506238 37.0 35.0 37.0 35.0 37.0 8 34.66676293442768 37.0 35.0 37.0 33.0 37.0 9 36.958736066406125 39.0 37.0 39.0 33.0 39.0 10 36.907433113314916 39.0 37.0 39.0 32.0 39.0 11 36.84954358212339 39.0 37.0 39.0 33.0 39.0 12 36.4788156581066 39.0 35.0 39.0 32.0 39.0 13 36.356849839372586 39.0 35.0 39.0 32.0 39.0 14 37.430327760672135 40.0 35.0 41.0 32.0 41.0 15 37.599748927468454 40.0 35.0 41.0 33.0 41.0 16 37.66409926758866 40.0 35.0 41.0 33.0 41.0 17 37.56976617803014 39.0 35.0 41.0 33.0 41.0 18 37.505293950502846 39.0 36.0 41.0 33.0 41.0 19 37.443244720412025 39.0 35.0 41.0 32.0 41.0 20 37.30862202016344 39.0 35.0 41.0 32.0 41.0 21 37.19822774157385 39.0 35.0 41.0 32.0 41.0 22 37.11921908213348 39.0 35.0 41.0 32.0 41.0 23 37.05543547963859 39.0 35.0 41.0 32.0 41.0 24 36.91968939672721 39.0 35.0 41.0 32.0 41.0 25 36.806061608261636 38.0 35.0 41.0 31.0 41.0 26 36.700991557938444 38.0 35.0 41.0 31.0 41.0 27 36.590280527361 38.0 35.0 41.0 31.0 41.0 28 36.61151300313491 38.0 35.0 41.0 31.0 41.0 29 36.572751254974484 38.0 35.0 41.0 31.0 41.0 30 36.50727675583856 38.0 35.0 41.0 31.0 41.0 31 36.39414428053047 38.0 35.0 41.0 31.0 41.0 32 36.3036285182373 38.0 35.0 41.0 30.0 41.0 33 36.19596156742547 38.0 35.0 41.0 30.0 41.0 34 36.04169092769515 38.0 35.0 41.0 30.0 41.0 35 35.93093098688429 38.0 35.0 41.0 30.0 41.0 36 35.809722112238894 38.0 35.0 41.0 29.0 41.0 37 35.74036274313432 38.0 35.0 41.0 29.0 41.0 38 35.64585342146491 38.0 35.0 40.0 29.0 41.0 39 35.582163757672305 38.0 35.0 40.0 28.0 41.0 40 35.44702012462017 38.0 35.0 40.0 27.0 41.0 41 35.37954806944322 38.0 34.0 40.0 27.0 41.0 42 35.30579221380138 38.0 34.0 40.0 27.0 41.0 43 35.20854236635473 37.0 34.0 40.0 27.0 41.0 44 35.072648776390174 37.0 34.0 40.0 27.0 41.0 45 34.96344697587251 37.0 34.0 40.0 26.0 41.0 46 34.91042207202381 37.0 34.0 40.0 26.0 41.0 47 34.83900536770403 37.0 34.0 40.0 26.0 41.0 48 34.77004038587845 36.0 34.0 40.0 26.0 41.0 49 34.71183099728742 36.0 34.0 40.0 26.0 41.0 50 34.58244169201459 36.0 34.0 40.0 26.0 41.0 51 34.2170931173209 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 1.0 12 7.0 13 6.0 14 22.0 15 34.0 16 109.0 17 222.0 18 541.0 19 1038.0 20 1841.0 21 2874.0 22 4562.0 23 6393.0 24 9261.0 25 13333.0 26 17383.0 27 20071.0 28 22014.0 29 24683.0 30 29511.0 31 35776.0 32 45101.0 33 58810.0 34 97231.0 35 151886.0 36 102057.0 37 130642.0 38 187922.0 39 324469.0 40 270.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.99884323416202 23.40812717281771 27.14285048840362 14.450179104616659 2 32.773815790086594 25.156939741039725 28.415137639607664 13.654106829266022 3 30.14562827912061 25.260505219420626 30.580075368340637 14.013791133118128 4 25.534557797145197 27.91943630567809 30.407569751427328 16.13843614574939 5 23.29082024790501 31.75912253488542 29.275724841895727 15.67433237531384 6 20.771710320990874 41.12698494030623 27.33592945746906 10.765375281233842 7 85.25076975391165 4.405647501618696 8.032768303684415 2.3108144407852342 8 82.18782461256107 6.79735791577192 7.509040629653266 3.505776842013735 9 79.29451258235164 5.565130574796169 10.695115342752047 4.445241500100149 10 42.35991099890224 25.158259540989103 17.28557520763559 15.196254252473071 11 35.683198325562046 24.339362490043275 24.13820945069926 15.839229733695422 12 31.505332768148413 22.32363979088158 28.084799475806516 18.08622796516349 13 23.735825736720095 30.17544023091841 28.887858927359762 17.20087510500173 14 19.40571737338072 33.1064053773308 29.635098604583277 17.852778644705193 15 18.229309806734705 23.82634848618946 40.15398183644729 17.79035987062855 16 20.10459026422395 21.530983468341105 38.23840866285633 20.12601760457862 17 19.886202190246834 22.371307859641604 29.6517901921784 28.090699757933162 18 23.309297447196357 23.66820539813706 32.28292784420771 20.739569310458872 19 26.937660413920316 25.47361409360021 26.733634868804124 20.85509062367535 20 28.13347680335136 24.871241869644134 25.418648307473017 21.576633019531485 21 24.31350993809362 26.915456720654245 28.080063723046965 20.690969618205166 22 23.34011865777898 24.223841176826795 26.878502322071558 25.557537843322663 23 21.44434248342875 28.525690294191175 26.20773340662105 23.822233815759034 24 21.802085905002354 24.931176314404297 32.71900527454168 20.547732506051673 25 21.366629556997502 25.66490745096943 30.395225740136052 22.57323725189702 26 19.68497151561168 28.681504323509365 28.152575084971826 23.48094907590713 27 21.22750711527443 27.510453591952018 28.329040101733288 22.932999191040267 28 19.98650698639985 27.106361901567766 32.70735998087066 20.19977113116172 29 20.801056461041835 24.75028608604785 31.801356133265635 22.64730131964468 30 22.54482273533974 26.045320377555946 30.746758338418445 20.66309854868587 31 26.363081624192397 25.539992267525 26.37767705892674 21.71924904935586 32 26.59909290925832 26.191740536646186 26.9986041174653 20.210562436630195 33 25.801700833958296 25.845021326414475 26.52619337087776 21.827084468749465 34 20.895771516232763 27.20635615655622 29.81552302119288 22.08234930601813 35 21.32920934666797 26.418047410319595 29.876621995320146 22.37612124769229 36 25.903325430060697 25.993071826618657 27.33142661058293 20.772176132737716 37 21.749604448191644 29.172004092932546 27.781866569777826 21.296524889097988 38 21.848201267939572 29.71886708372345 25.749219377147586 22.68371227118939 39 21.531915091834787 27.832640050183453 26.369835894521586 24.265608963460174 40 22.88113881655868 24.995846511924004 27.681561773624807 24.441452897892514 41 20.300075927314733 24.219648871105232 27.814162850892103 27.66611235068793 42 23.47435007616022 26.030569672239327 25.920094652946958 24.57498559865349 43 23.080583879497606 25.54635836139849 27.327467210734785 24.045590548369116 44 22.275040098627873 27.43180904202709 27.78636941666395 22.50678144268109 45 20.515048048481688 29.126742718197868 26.836423994273623 23.521785239046825 46 22.750400986278738 27.604625200104966 27.833882214841694 21.811091598774603 47 22.998135200306816 26.529221147232224 27.987677726590242 22.484965925870718 48 23.339497575449858 24.87341565779606 28.56947659839419 23.217610168359894 49 22.473786443946544 24.2116524361178 29.292726970655416 24.021834149280245 50 21.228050562312415 27.48902625159735 28.48042891945649 22.80249426663375 51 21.10880275512121 28.145510273478074 26.840771570577466 23.904915400823246 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1471.0 1 1937.5 2 2404.0 3 7710.5 4 13017.0 5 9121.0 6 5225.0 7 5372.5 8 5520.0 9 5886.5 10 6253.0 11 6237.0 12 6221.0 13 6301.5 14 6382.0 15 6205.5 16 6029.0 17 6094.5 18 6160.0 19 5639.0 20 5118.0 21 5786.0 22 6454.0 23 6774.5 24 7095.0 25 8168.0 26 9948.5 27 10656.0 28 11966.5 29 13277.0 30 15622.5 31 17968.0 32 20154.0 33 22340.0 34 25829.0 35 29318.0 36 32235.0 37 35152.0 38 40190.5 39 45229.0 40 56263.5 41 67298.0 42 79883.0 43 92468.0 44 100455.0 45 108442.0 46 110978.0 47 113514.0 48 110085.5 49 106657.0 50 98862.0 51 91067.0 52 85548.0 53 80029.0 54 73806.0 55 67583.0 56 63353.5 57 59124.0 58 55955.5 59 52787.0 60 49367.0 61 45947.0 62 42432.5 63 38918.0 64 35163.5 65 31409.0 66 27043.5 67 22678.0 68 19699.5 69 16721.0 70 14667.0 71 12613.0 72 10348.5 73 8084.0 74 6734.0 75 4510.5 76 3637.0 77 2592.5 78 1548.0 79 1204.5 80 861.0 81 645.0 82 429.0 83 326.5 84 224.0 85 144.5 86 65.0 87 46.5 88 28.0 89 21.5 90 15.0 91 14.0 92 13.0 93 7.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1288074.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.85356859141707 #Duplication Level Percentage of deduplicated Percentage of total 1 78.46562777841103 20.286164898377503 2 6.292184107418035 3.253508268219131 3 2.4077524250226316 1.867469774144202 4 1.3833117302187705 1.4305417880209124 5 1.001139630551992 1.2941516054030933 6 0.7488075495232478 1.1615608406022133 7 0.6264181576653373 1.1336601364276935 8 0.5375949633793076 1.111899860810182 9 0.42666365375296406 0.9927700233990191 >10 6.894415451372457 44.9833005443316 >50 1.1487657196896557 18.67222297140603 >100 0.06483703269986561 2.7318367101700476 >500 0.0012409001473522325 0.18976323819667595 >1k 9.306751105141744E-4 0.290820583981888 >5k 3.102250368380581E-4 0.6003287565097716 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7485 0.5811001541836882 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1551 0.12041233655830333 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08159469098825067 0.0 2 0.0 0.0 0.0 0.24012595549634572 0.0 3 0.0 0.0 0.0 0.3825867147384389 0.0 4 0.0 0.0 0.0 0.6079619649181647 0.0 5 0.0 0.0 0.0 1.0183421138847613 0.0 6 0.0 0.0 0.0 1.7739664025514061 0.0 7 0.0 0.0 0.0 2.1894704807332497 0.0 8 0.0 0.0 0.0 3.325740601859831 0.0 9 0.0 0.0 0.0 3.967008106677101 0.0 10 0.0 0.0 0.0 4.863307542889617 0.0 11 0.0 0.0 0.0 5.415682639351465 0.0 12 0.0 0.0 0.0 5.926522855053359 0.0 13 0.0 0.0 0.0 6.162767045992699 0.0 14 0.0 0.0 0.0 6.2651679950064985 0.0 15 0.0 0.0 0.0 6.363066097134171 0.0 16 0.0 0.0 0.0 6.550632960528665 0.0 17 0.0 0.0 0.0 6.755745399720824 0.0 18 0.0 0.0 0.0 7.082124163673826 0.0 19 0.0 0.0 0.0 7.2256718169918805 0.0 20 0.0 0.0 0.0 7.381951658056913 0.0 21 0.0 0.0 0.0 7.560901004134855 0.0 22 0.0 0.0 0.0 7.74862313811163 0.0 23 0.0 0.0 0.0 7.96934027082295 0.0 24 0.0 0.0 0.0 8.135867970318476 0.0 25 0.0 0.0 0.0 8.270642835737698 0.0 26 0.0 0.0 0.0 8.408756018675946 0.0 27 0.0 0.0 0.0 8.554399824854784 0.0 28 0.0 0.0 0.0 8.695074972400654 0.0 29 0.0 0.0 0.0 8.848637578275783 0.0 30 0.0 0.0 0.0 9.059339758430028 0.0 31 0.0 0.0 0.0 9.220200081672326 0.0 32 0.0 0.0 0.0 9.38501980476277 0.0 33 0.0 0.0 0.0 9.553566021827939 0.0 34 0.0 0.0 0.0 9.71737648613356 0.0 35 0.0 0.0 0.0 9.903623549578674 0.0 36 0.0 0.0 0.0 10.062465355251328 0.0 37 0.0 0.0 0.0 10.238386924974808 0.0 38 0.0 0.0 0.0 10.419742965078093 0.0 39 0.0 0.0 0.0 10.654434450194632 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 205 0.0 42.80488 31 CGTTTTT 4940 0.0 41.03745 1 CGTTCGG 260 0.0 40.67308 45 TGTTACG 95 0.0 40.263157 1 TATAGCG 45 1.9286745E-8 40.0 1 CGACGGT 220 0.0 39.886364 28 CCAACGG 40 3.4586628E-7 39.375 2 TAGTACG 40 3.4586628E-7 39.375 1 CGTAAGG 150 0.0 39.0 2 GATTACG 35 6.2488743E-6 38.57143 1 AGGGTAC 560 0.0 38.169643 6 GCGTTAG 95 0.0 37.894737 1 AGGGCGA 1385 0.0 37.68953 6 TAGGGTC 240 0.0 37.500004 5 GTTACGG 145 0.0 37.24138 2 GTAGGGT 685 0.0 37.11679 4 GTTGATC 820 0.0 37.042683 16 ATTAGCG 55 2.750312E-9 36.81818 1 ATAGGGT 410 0.0 36.76829 4 TAGGGTA 705 0.0 36.70213 5 >>END_MODULE