##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546567_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 144656 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.42375013825904 31.0 31.0 33.0 30.0 34.0 2 31.805905043689858 31.0 31.0 34.0 30.0 34.0 3 31.911265346753677 31.0 31.0 34.0 30.0 34.0 4 35.67357040150426 37.0 35.0 37.0 33.0 37.0 5 35.613261807322196 37.0 35.0 37.0 33.0 37.0 6 35.64816530251078 37.0 35.0 37.0 33.0 37.0 7 35.99550658113041 37.0 35.0 37.0 35.0 37.0 8 34.65000414777126 37.0 35.0 37.0 33.0 37.0 9 36.95557045680788 39.0 37.0 39.0 33.0 39.0 10 36.867679183718614 39.0 37.0 39.0 32.0 39.0 11 36.80583591416879 39.0 37.0 39.0 32.0 39.0 12 36.44773116911846 39.0 35.0 39.0 32.0 39.0 13 36.30802040703462 39.0 35.0 39.0 32.0 39.0 14 37.39740487777901 40.0 35.0 41.0 32.0 41.0 15 37.566302123658886 40.0 35.0 41.0 33.0 41.0 16 37.626182114810305 40.0 35.0 41.0 33.0 41.0 17 37.51009291007632 39.0 35.0 41.0 32.0 41.0 18 37.42920445747152 39.0 35.0 41.0 32.0 41.0 19 37.353659716845485 39.0 35.0 41.0 32.0 41.0 20 37.20003318217012 39.0 35.0 41.0 32.0 41.0 21 37.09241234376728 39.0 35.0 41.0 32.0 41.0 22 36.98968587545625 39.0 35.0 41.0 32.0 41.0 23 36.938661375953984 39.0 35.0 41.0 32.0 41.0 24 36.80327120893706 38.0 35.0 41.0 31.0 41.0 25 36.6891660214578 38.0 35.0 41.0 31.0 41.0 26 36.585734432031856 38.0 35.0 41.0 31.0 41.0 27 36.46499281052981 38.0 35.0 40.0 31.0 41.0 28 36.48483298307709 38.0 35.0 40.0 31.0 41.0 29 36.42975749364008 38.0 35.0 40.0 31.0 41.0 30 36.35871999778786 38.0 35.0 40.0 31.0 41.0 31 36.23930566309036 38.0 35.0 40.0 30.0 41.0 32 36.096435681893595 38.0 35.0 41.0 30.0 41.0 33 35.925201858201525 38.0 35.0 41.0 30.0 41.0 34 35.73022204402168 38.0 35.0 41.0 29.0 41.0 35 35.58702024112377 38.0 35.0 41.0 28.0 41.0 36 35.46055469527707 38.0 35.0 40.0 27.0 41.0 37 35.414673432142465 38.0 35.0 40.0 27.0 41.0 38 35.316841333923236 38.0 34.0 40.0 27.0 41.0 39 35.24545127751355 38.0 34.0 40.0 26.0 41.0 40 35.097362017475945 38.0 34.0 40.0 25.0 41.0 41 35.00163145669727 37.0 34.0 40.0 25.0 41.0 42 34.95416021457803 37.0 34.0 40.0 25.0 41.0 43 34.8405734985068 37.0 34.0 40.0 24.0 41.0 44 34.708328724698596 37.0 34.0 40.0 24.0 41.0 45 34.608084006194005 37.0 34.0 40.0 24.0 41.0 46 34.53552566087822 36.0 34.0 40.0 24.0 41.0 47 34.47932336024776 36.0 34.0 40.0 23.0 41.0 48 34.39826208384029 36.0 34.0 40.0 23.0 41.0 49 34.31677911735427 36.0 34.0 40.0 24.0 41.0 50 34.206628138480255 36.0 33.0 40.0 24.0 41.0 51 33.842177303395644 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 2.0 13 1.0 14 4.0 15 4.0 16 15.0 17 36.0 18 58.0 19 126.0 20 240.0 21 380.0 22 591.0 23 845.0 24 1133.0 25 1651.0 26 2257.0 27 2700.0 28 2863.0 29 3107.0 30 3402.0 31 4136.0 32 5132.0 33 6454.0 34 10924.0 35 16788.0 36 11265.0 37 14488.0 38 20864.0 39 35165.0 40 23.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.19646609888287 25.363621280831765 28.429515540316334 16.01039707996903 2 33.24093020683553 25.78323747373078 27.077342108173873 13.898490211259817 3 28.860883751797367 25.19563654463002 31.72699369538768 14.216486008184937 4 25.856514766065704 27.490045348965825 30.745354496184053 15.908085388784427 5 23.137650702355934 31.10828448180511 30.21374847915054 15.54031633668842 6 21.3700088485787 39.981749806437335 27.680842827120895 10.967398517863067 7 85.60861630350625 4.286721601592744 8.159357371972128 1.9453047229288793 8 83.61008184935295 6.088236920694613 7.8185488330936845 2.4831323968587546 9 80.91610441322862 5.190935737197213 10.298224753898905 3.594735095675257 10 43.642157947129746 23.873880101758655 17.710292003097003 14.7736699480146 11 35.30029863953102 24.21607123105851 24.406177414002876 16.077452715407585 12 31.912260811857095 21.85875456254839 28.19654905430815 18.032435571286364 13 24.272757438336466 28.98324300409247 29.37797256940604 17.366026988165025 14 19.906536887512445 32.26758655016038 30.522757438336466 17.303119123990708 15 18.832955425284815 23.35540869372857 39.93750691295211 17.87412896803451 16 21.537993584780445 21.19787634111271 37.65139365114478 19.61273642296206 17 21.18197655126645 21.60919699148324 30.256608782214357 26.95221767503595 18 23.857289016701692 23.27798363012941 32.383032850348414 20.481694502820485 19 26.903135715075766 24.61978763411127 27.72577701581683 20.75129963499613 20 28.18410574051543 23.93333148987944 26.55403163366884 21.32853113593629 21 25.362929985621058 25.43344209711315 29.25768720274306 19.94594071452273 22 24.292113704236257 23.38720827342108 28.232496405264907 24.088181617077755 23 22.803063820373854 26.782850348412783 26.951526379825243 23.46255945138812 24 22.420086273642294 24.73039486782436 32.681672381373744 20.167846477159607 25 22.129050989934743 24.618405043689854 31.08892821590532 22.163615750470083 26 20.378691516425175 28.22005309147218 28.51523614644398 22.886019245658666 27 21.02574383364672 27.360081849352945 29.465075765955095 22.14909855104524 28 20.04894370091804 26.55403163366884 32.86693949784316 20.530085167569958 29 21.04510009954651 24.9488441544077 32.2703517310032 21.735704015042582 30 22.311552925561333 25.00829554252848 31.623299413781663 21.056852118128525 31 26.545044795929655 25.12028536666298 26.95843933193231 21.376230505475057 32 26.09501161375954 25.539901559561994 27.73752903439885 20.627557792279617 33 25.92011392545072 25.119594071452273 26.887927220440215 22.072364782656788 34 22.740155956199533 26.317608671607122 29.502405707333256 21.43982966486008 35 22.239658223647826 25.358090919146115 29.69942484238469 22.70282601482137 36 26.227048999004538 25.9069793164473 27.207305607786747 20.65866607676142 37 22.341278619621725 27.255696272536223 28.97218228072116 21.430842827120895 38 24.0826512553921 28.428824245105627 25.421690078531135 22.066834420971134 39 22.744995022674484 26.93908306603252 26.95636544630019 23.35955646499281 40 23.55242782878 25.29656564539321 27.762415661984292 23.388590863842495 41 20.7077480367216 24.82164583563765 28.81733215352284 25.65327397411791 42 24.127585444088044 26.2332706559009 25.9069793164473 23.732164583563765 43 23.292500829554253 25.535753788297754 27.86403605795819 23.3077093241898 44 22.60327950447959 27.526683995133283 27.089094126755892 22.780942373631234 45 21.161928990155957 28.768941488773365 26.98194336909634 23.08718615197434 46 23.65543081517531 27.228735759318663 27.1305718393983 21.985261586107733 47 23.329830770932418 26.737916159716846 27.43197655126645 22.500276518084284 48 24.06398628470302 25.382977546731556 28.473067138590864 22.07996902997456 49 22.975887623050546 23.981722154628912 29.391798473620174 23.650591748700364 50 21.848385134387787 27.731998672713193 28.04722928879549 22.37238690410353 51 21.384526048003536 28.67146886406371 26.815341223316004 23.128663864616748 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 168.0 1 233.5 2 299.0 3 990.0 4 1681.0 5 1212.5 6 744.0 7 750.0 8 756.0 9 787.0 10 818.0 11 834.0 12 850.0 13 854.5 14 859.0 15 811.0 16 763.0 17 720.5 18 678.0 19 682.5 20 687.0 21 702.0 22 717.0 23 754.5 24 792.0 25 831.5 26 1047.5 27 1224.0 28 1351.0 29 1478.0 30 1748.5 31 2019.0 32 2287.0 33 2555.0 34 2840.0 35 3125.0 36 3476.0 37 3827.0 38 4345.5 39 4864.0 40 6153.5 41 7443.0 42 8483.5 43 9524.0 44 9907.0 45 10290.0 46 10353.5 47 10417.0 48 10962.0 49 11507.0 50 11293.5 51 11080.0 52 10584.0 53 10088.0 54 9303.0 55 8518.0 56 7921.0 57 7324.0 58 6950.5 59 6577.0 60 6027.5 61 5478.0 62 5011.0 63 4544.0 64 4237.0 65 3930.0 66 3322.0 67 2714.0 68 2312.5 69 1911.0 70 1596.0 71 1281.0 72 1094.5 73 908.0 74 757.5 75 491.5 76 376.0 77 274.0 78 172.0 79 125.0 80 78.0 81 79.5 82 81.0 83 49.5 84 18.0 85 12.5 86 7.0 87 6.0 88 5.0 89 4.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 144656.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.04700807432806 #Duplication Level Percentage of deduplicated Percentage of total 1 67.48853527819216 33.775992699922575 2 10.949499972374165 10.959794270545293 3 6.847063373667053 10.280251078420529 4 4.804132825017956 9.617298971352726 5 3.458754627327477 8.655016038048888 6 2.2694624012376376 6.81478818714744 7 1.4973202939388917 5.245548058843048 8 0.9489474556605337 3.7993584780444642 9 0.6215813028344107 2.79974560336246 >10 1.1050334272611746 7.052593739630572 >50 0.005525167136305873 0.154158831987612 >100 0.0027625835681529365 0.20185820152637982 >500 0.0013812917840764682 0.6435958411680124 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 931 0.6435958411680124 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 180 0.12443313792722044 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03179957969251189 0.0 2 0.0 0.0 0.0 0.09263355823470855 0.0 3 0.0 0.0 0.0 0.16660214578033403 0.0 4 0.0 0.0 0.0 0.2834310363897799 0.0 5 0.0 0.0 0.0 0.4832153522840394 0.0 6 0.0 0.0 0.0 0.884166574493972 0.0 7 0.0 0.0 0.0 1.1005419754451942 0.0 8 0.0 0.0 0.0 1.6335305829001217 0.0 9 0.0 0.0 0.0 1.9425395420860525 0.0 10 0.0 0.0 0.0 2.358699258931534 0.0 11 0.0 0.0 0.0 2.652499723481916 0.0 12 0.0 0.0 0.0 2.9151919035504923 0.0 13 0.0 0.0 0.0 3.0306382037385244 0.0 14 0.0 0.0 0.0 3.0797201636987057 0.0 15 0.0 0.0 0.0 3.138480256608782 0.0 16 0.0 0.0 0.0 3.2601482136931756 0.0 17 0.0 0.0 0.0 3.402555027098772 0.0 18 0.0 0.0 0.0 3.6161652472071673 0.0 19 0.0 0.0 0.0 3.71225528149541 0.0 20 0.0 0.0 0.0 3.825627696051322 0.0 21 0.0 0.0 0.0 3.9417652914500607 0.0 22 0.0 0.0 0.0 4.055137706005973 0.0 23 0.0 0.0 0.0 4.212753014047118 0.0 24 0.0 0.0 0.0 4.329581904656565 0.0 25 0.0 0.0 0.0 4.409080853887844 0.0 26 0.0 0.0 0.0 4.507244773808207 0.0 27 0.0 0.0 0.0 4.605408693728569 0.0 28 0.0 0.0 0.0 4.709102975334587 0.0 29 0.0 0.0 0.0 4.805884304833536 0.0 30 0.0 0.0 0.0 4.946217232607013 0.0 31 0.0 0.0 0.0 5.056133171109391 0.0 32 0.0 0.0 0.0 5.175727242561663 0.0 33 0.0 0.0 0.0 5.290482247538989 0.0 34 0.0 0.0 0.0 5.425284813626811 0.0 35 0.0 0.0 0.0 5.5711481030859415 0.0 36 0.0 0.0 0.0 5.68106404158832 0.0 37 0.0 0.0 0.0 5.82070567415109 0.0 38 0.0 0.0 0.0 5.963112487556686 0.0 39 0.0 0.0 0.0 6.138010175865501 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACGAC 25 3.8738595E-5 45.000004 12 GCGCAAT 25 3.8738595E-5 45.000004 19 TAGGGTA 50 2.1827873E-11 45.000004 5 CGCAATC 25 3.8738595E-5 45.000004 20 AGTAGCG 30 2.1523192E-6 45.000004 1 CAATCGG 25 3.8738595E-5 45.000004 22 ACGACGC 25 3.8738595E-5 45.000004 14 GCAACGA 20 7.012833E-4 45.0 11 TCGTAAG 20 7.012833E-4 45.0 1 GTAACGG 20 7.012833E-4 45.0 2 TGCGTAG 20 7.012833E-4 45.0 1 TAGTAAG 20 7.012833E-4 45.0 1 GTTGATC 115 0.0 43.043476 16 TTGATCC 110 0.0 42.954544 17 GTAGCAT 110 0.0 42.954544 29 ATCCTGC 105 0.0 42.857143 20 AAGGGAC 100 0.0 42.750004 5 CGTTTTT 635 0.0 42.519684 1 TGATCCT 115 0.0 41.086956 18 TAGCGGG 115 0.0 41.086956 3 >>END_MODULE