##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546565_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3090186 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.386551489133662 31.0 31.0 33.0 30.0 34.0 2 31.745568713339587 31.0 31.0 34.0 30.0 34.0 3 31.83349222344545 31.0 31.0 34.0 30.0 34.0 4 35.61112437892088 37.0 35.0 37.0 33.0 37.0 5 35.54111823689577 37.0 35.0 37.0 33.0 37.0 6 35.59045895619228 37.0 35.0 37.0 33.0 37.0 7 35.969174023828984 37.0 35.0 37.0 35.0 37.0 8 34.648128623972795 37.0 35.0 37.0 33.0 37.0 9 36.9278454436076 39.0 37.0 39.0 33.0 39.0 10 36.819302786304775 39.0 37.0 39.0 32.0 39.0 11 36.760409891184544 39.0 35.0 39.0 32.0 39.0 12 36.413660213333436 39.0 35.0 39.0 32.0 39.0 13 36.276350355609665 39.0 35.0 39.0 32.0 39.0 14 37.340767190065584 39.0 35.0 41.0 32.0 41.0 15 37.51755266511466 40.0 35.0 41.0 32.0 41.0 16 37.57116691357737 40.0 35.0 41.0 33.0 41.0 17 37.44926163020608 39.0 35.0 41.0 32.0 41.0 18 37.38489139488691 39.0 36.0 41.0 32.0 41.0 19 37.29649509770609 39.0 35.0 41.0 32.0 41.0 20 37.160014639895465 39.0 35.0 41.0 32.0 41.0 21 37.04634834278584 39.0 35.0 41.0 32.0 41.0 22 36.95637641229363 39.0 35.0 41.0 31.0 41.0 23 36.872763969547464 38.0 35.0 41.0 31.0 41.0 24 36.72555341328969 38.0 35.0 41.0 31.0 41.0 25 36.613692832729164 38.0 35.0 41.0 31.0 41.0 26 36.48356215451109 38.0 35.0 40.0 31.0 41.0 27 36.3627470967767 38.0 35.0 40.0 30.0 41.0 28 36.3665031813619 38.0 35.0 40.0 30.0 41.0 29 36.317951411338996 38.0 35.0 40.0 30.0 41.0 30 36.20832144084531 38.0 35.0 40.0 30.0 41.0 31 36.1013608889562 38.0 35.0 40.0 30.0 41.0 32 35.97222303123501 38.0 35.0 40.0 30.0 41.0 33 35.806552744721515 38.0 35.0 41.0 29.0 41.0 34 35.621687173522886 38.0 35.0 40.0 28.0 41.0 35 35.50750310822714 38.0 35.0 41.0 27.0 41.0 36 35.35231180259052 38.0 35.0 40.0 26.0 41.0 37 35.30580262806187 38.0 34.0 40.0 26.0 41.0 38 35.18148486854837 38.0 34.0 40.0 26.0 41.0 39 35.117902611687455 38.0 34.0 40.0 26.0 41.0 40 34.969032284788035 37.0 34.0 40.0 25.0 41.0 41 34.88629163422525 37.0 34.0 40.0 25.0 41.0 42 34.80233908250183 37.0 34.0 40.0 24.0 41.0 43 34.70106459611169 37.0 34.0 40.0 24.0 41.0 44 34.5613442038764 37.0 34.0 40.0 24.0 41.0 45 34.42605493649897 36.0 34.0 40.0 23.0 41.0 46 34.35302276303109 36.0 34.0 40.0 23.0 41.0 47 34.27327643060968 36.0 33.0 40.0 23.0 41.0 48 34.20210045608905 36.0 33.0 40.0 23.0 41.0 49 34.132383293432824 36.0 33.0 40.0 24.0 41.0 50 34.0180193036924 35.0 33.0 40.0 23.0 41.0 51 33.64023039389862 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 6.0 11 12.0 12 8.0 13 15.0 14 34.0 15 135.0 16 306.0 17 738.0 18 1634.0 19 3092.0 20 5279.0 21 8257.0 22 12501.0 23 18180.0 24 26295.0 25 37805.0 26 50053.0 27 58117.0 28 61722.0 29 67732.0 30 77511.0 31 92583.0 32 113932.0 33 144925.0 34 234529.0 35 350258.0 36 247419.0 37 318304.0 38 449606.0 39 708627.0 40 567.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.7844757564755 23.4265510231423 26.797092472750833 14.991880747631372 2 33.83304435396445 24.432251003661268 28.093163324149423 13.64154131822486 3 29.83535618891549 25.06457540096292 30.872251702648317 14.227816707473274 4 25.68389087258825 27.514233771041614 30.67488494220089 16.126990414169246 5 22.875160265433863 31.379502722489843 30.147052636961014 15.598284375115284 6 20.928222443568124 40.556555495365004 27.58850114523851 10.926720915828367 7 84.96656835543233 4.303915686628572 8.571134553065738 2.1583814048733636 8 82.07593329333575 6.476632798155192 8.304678100282636 3.14275580822643 9 79.14397385788429 5.468991186938262 11.43222446804173 3.9548104871357257 10 41.620957443985574 25.265242933596877 18.265696627969966 14.848102994447585 11 35.20794541170014 24.75475586259209 23.976647360385428 16.060651365322347 12 30.911149037630743 21.63203121106626 28.15817559201938 19.298644159283615 13 23.823841024456133 28.182154731139157 29.904478241762796 18.08952600264191 14 20.46585545336106 30.70371815806557 30.852188185436084 17.978238203137288 15 19.43669410190843 23.018517331966425 39.21103778219175 18.333750783933393 16 22.055371424244367 20.571383081795076 37.322251799729855 20.050993694230705 17 21.258073138639553 21.19399932560694 30.55434203636933 26.99358549938418 18 24.009687442762345 22.169248064679604 32.836437677214256 20.984626815343802 19 27.6163635457542 24.70449998802661 26.85498542806161 20.824151038157574 20 29.06407575466331 24.259640034612804 25.45002145501921 21.226262755704674 21 25.16453702139612 26.19884369419834 28.734678106754743 19.901941177650794 22 24.80750349655328 22.108313221275353 27.81706343889979 25.26711984327157 23 22.533595065151417 26.63360716798277 26.943847393004823 23.88895037386099 24 22.6653670685195 24.45723331864166 32.86776265247464 20.0096369603642 25 23.141616718216962 24.165406224738575 30.133687745656733 22.55928931138773 26 20.635651057897487 27.65432242589928 28.015692259300895 23.694334256902337 27 21.790241752438202 25.580919724573214 28.813443592068566 23.815394930920018 28 20.02047773176113 26.459378173352672 32.46519788776469 21.054946207121514 29 21.68756184902786 24.850769500606113 30.62559988298439 22.83606876738164 30 23.010135959453574 25.070950421754546 30.578709501628705 21.340204117163175 31 27.23522143974505 25.199195129354674 25.771037730414932 21.794545700485344 32 27.461809742196746 24.70045492407253 26.214473821316904 21.623261512413816 33 25.777833437857783 25.26899675294626 25.204243369169365 23.748926440026587 34 22.173066605052252 27.211792429323022 28.021743674976197 22.59339729064852 35 22.78775452351412 25.7819108623235 28.443724746665733 22.98660986749665 36 26.73153007618312 26.73822870209107 25.599721181831775 20.930520039894038 37 23.187115597572443 27.333759197666417 26.91614679504729 22.56297840971385 38 24.11508562914983 28.68629914186395 24.90215799307873 22.296457235907482 39 22.795197441189625 26.456562808840633 25.527880846007328 25.220358903962413 40 24.00541585522684 24.33811427532194 27.329843575758872 24.326626293692357 41 20.7259045248409 23.749508929235972 28.03070753669844 27.493879009224685 42 23.638124048196453 25.41727261724699 25.813235837583886 25.131367496972672 43 22.879140608364672 24.76718229905902 27.704966626604353 24.648710465971952 44 22.781508944769023 26.598657815419525 27.46074184531287 23.159091394498585 45 21.64283962195156 27.58374415002851 26.864240534388546 23.909175693631386 46 23.677344988295204 26.420092512230653 27.150825225407143 22.751737274066997 47 22.808950658633492 26.08341374920474 28.00711672371825 23.10051886844352 48 23.183555941292855 25.408082231943318 28.785807715134297 22.622554111629526 49 23.185303408921015 23.93396384554198 28.60578618892196 24.27494655661504 50 22.501331635053685 26.327897414589284 28.047081955584552 23.123688994772483 51 21.646075673114822 27.481776177874085 26.681791969803758 24.19035617920734 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3276.0 1 4461.5 2 5647.0 3 21314.5 4 36982.0 5 25991.0 6 15000.0 7 15422.0 8 15844.0 9 16808.0 10 17772.0 11 18055.5 12 18339.0 13 18280.0 14 18221.0 15 17474.0 16 16727.0 17 16592.0 18 16457.0 19 15893.5 20 15330.0 21 15019.0 22 14708.0 23 15446.5 24 16185.0 25 16630.0 26 20221.5 27 23368.0 28 26611.0 29 29854.0 30 33975.5 31 38097.0 32 40695.5 33 43294.0 34 50469.0 35 57644.0 36 67828.5 37 78013.0 38 85211.5 39 92410.0 40 112402.5 41 132395.0 42 156145.0 43 179895.0 44 190913.0 45 201931.0 46 210323.0 47 218715.0 48 233912.5 49 249110.0 50 253417.0 51 257724.0 52 249291.5 53 240859.0 54 215906.0 55 190953.0 56 176526.5 57 162100.0 58 151330.5 59 140561.0 60 135038.0 61 129515.0 62 116486.5 63 103458.0 64 95720.0 65 87982.0 66 76080.5 67 64179.0 68 55580.5 69 46982.0 70 40217.0 71 33452.0 72 28977.0 73 24502.0 74 20029.0 75 12598.0 76 9640.0 77 7381.5 78 5123.0 79 3908.5 80 2694.0 81 2131.5 82 1569.0 83 1081.5 84 594.0 85 423.0 86 252.0 87 182.5 88 113.0 89 81.0 90 49.0 91 33.5 92 18.0 93 13.5 94 9.0 95 8.0 96 7.0 97 6.5 98 6.0 99 3.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3090186.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.94457770493811 #Duplication Level Percentage of deduplicated Percentage of total 1 80.57945071126714 18.48861468265899 2 6.89855329449397 3.1656878423434733 3 2.3381599669675497 1.609442791459874 4 1.208281984361081 1.1089407951859853 5 0.8086319842477258 0.9276859698635115 6 0.5696414106868043 0.7842108966872364 7 0.4614675455537575 0.7411724570085678 8 0.37159295154945793 0.6820834681147071 9 0.31528579280302127 0.6510689435008743 >10 4.0694816012028765 23.0706226082603 >50 1.8206345451448152 29.689498328537038 >100 0.5522203840904542 16.913449824326843 >500 0.004251933362396467 0.686309446062693 >1k 0.002199275877101621 0.7715220251949316 >5k 0.0 0.0 >10k+ 1.4661839180677477E-4 0.709689920794989 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21096 0.6826773534020283 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4192 0.13565526476399803 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05679269791527112 0.0 2 0.0 0.0 0.0 0.18002152621233802 0.0 3 0.0 0.0 0.0 0.28946477655390324 0.0 4 0.0 0.0 0.0 0.48065067927949967 0.0 5 0.0 0.0 0.0 0.8135756229560291 0.0 6 0.0 0.0 0.0 1.4527280882121658 0.0 7 0.0 0.0 0.0 1.829080838499689 0.0 8 0.0 0.0 0.0 2.836398844600293 0.0 9 0.0 0.0 0.0 3.3603478884442555 0.0 10 0.0 0.0 0.0 4.12162892460195 0.0 11 0.0 0.0 0.0 4.615515053139196 0.0 12 0.0 0.0 0.0 5.049113548504847 0.0 13 0.0 0.0 0.0 5.25279060872064 0.0 14 0.0 0.0 0.0 5.344144333059563 0.0 15 0.0 0.0 0.0 5.440384494655015 0.0 16 0.0 0.0 0.0 5.630114174357142 0.0 17 0.0 0.0 0.0 5.831623080293548 0.0 18 0.0 0.0 0.0 6.139856953594379 0.0 19 0.0 0.0 0.0 6.2713700728694 0.0 20 0.0 0.0 0.0 6.4123648220527825 0.0 21 0.0 0.0 0.0 6.595784201986547 0.0 22 0.0 0.0 0.0 6.776582380478068 0.0 23 0.0 0.0 0.0 6.985696006648143 0.0 24 0.0 0.0 0.0 7.1520613969515106 0.0 25 0.0 0.0 0.0 7.2925707384604035 0.0 26 0.0 0.0 0.0 7.429358621131543 0.0 27 0.0 0.0 0.0 7.569932683663702 0.0 28 0.0 0.0 0.0 7.71885575819708 0.0 29 0.0 0.0 0.0 7.87949333794147 0.0 30 0.0 0.0 0.0 8.092652028065624 0.0 31 0.0 0.0 0.0 8.262771237718377 0.0 32 0.0 0.0 0.0 8.433861262720107 0.0 33 0.0 0.0 0.0 8.61122922697857 0.0 34 3.236051163263312E-5 0.0 0.0 8.7839049170503 0.0 35 3.236051163263312E-5 0.0 0.0 8.98188652721875 0.0 36 3.236051163263312E-5 0.0 0.0 9.158024792035173 0.0 37 3.236051163263312E-5 0.0 0.0 9.341444171968936 0.0 38 3.236051163263312E-5 0.0 0.0 9.554020372883704 0.0 39 3.236051163263312E-5 0.0 0.0 9.82436008706272 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACGT 20 7.0351386E-4 45.0 30 CGTTTTT 14625 0.0 40.923077 1 TACGCAA 40 3.4607547E-7 39.375 1 AGGGCGA 3950 0.0 39.303795 6 AGGGTAC 2035 0.0 39.250614 6 TAACGCC 455 0.0 39.065933 12 CAGTAGC 3215 0.0 38.98134 27 GTTGATC 3265 0.0 38.866768 16 CATATGC 3070 0.0 38.843647 33 AGCATAT 3075 0.0 38.780487 31 TAGCATA 3070 0.0 38.77036 30 TCACGAC 285 0.0 38.684208 25 GGGTACC 3520 0.0 38.671875 7 GGGCGAT 6875 0.0 38.552727 7 AGTAGCA 3230 0.0 38.382355 28 TTGATCC 3340 0.0 38.19611 17 CGTAAGG 460 0.0 38.152172 2 GACACGA 1750 0.0 38.05714 25 GTAGCAT 3260 0.0 38.02914 29 ATATGCT 3115 0.0 37.99358 34 >>END_MODULE