##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546384_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 44101 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.004285617106188 31.0 31.0 33.0 30.0 33.0 2 31.17090315412349 31.0 31.0 33.0 30.0 34.0 3 31.122627604816216 31.0 31.0 34.0 28.0 34.0 4 35.09156254960205 35.0 35.0 37.0 32.0 37.0 5 32.70245572662751 35.0 35.0 37.0 28.0 37.0 6 33.934876760164165 35.0 35.0 37.0 28.0 37.0 7 14.943357293485409 0.0 0.0 35.0 0.0 37.0 8 24.721389537652207 17.0 17.0 35.0 17.0 37.0 9 32.6589419741049 32.0 32.0 37.0 27.0 39.0 10 35.506133647763086 37.0 35.0 37.0 32.0 39.0 11 36.435092174780614 37.0 35.0 39.0 32.0 39.0 12 36.17307997551076 37.0 35.0 39.0 32.0 39.0 13 35.66236593274529 37.0 35.0 39.0 31.0 39.0 14 36.66422530101358 39.0 35.0 40.0 31.0 41.0 15 37.14255912564341 39.0 35.0 40.0 32.0 41.0 16 37.25845218929276 39.0 35.0 41.0 32.0 41.0 17 37.25126414367021 39.0 35.0 41.0 32.0 41.0 18 37.15720731956191 39.0 35.0 40.0 32.0 41.0 19 37.08426112786558 39.0 35.0 40.0 32.0 41.0 20 37.218249019296614 39.0 35.0 40.0 32.0 41.0 21 37.04621210403392 39.0 35.0 40.0 32.0 41.0 22 37.11591573887213 39.0 35.0 40.0 32.0 41.0 23 37.084737307544046 39.0 35.0 40.0 32.0 41.0 24 36.91664588104578 38.0 35.0 40.0 32.0 41.0 25 36.673884945919596 38.0 35.0 40.0 31.0 41.0 26 36.52706287839278 38.0 35.0 40.0 31.0 41.0 27 36.411850071426954 38.0 35.0 40.0 31.0 41.0 28 36.38123852066847 38.0 35.0 40.0 31.0 41.0 29 36.42554590598853 38.0 35.0 40.0 31.0 41.0 30 36.15235482188613 38.0 35.0 40.0 30.0 41.0 31 36.04387655608716 38.0 35.0 40.0 30.0 41.0 32 35.911861409038345 38.0 34.0 40.0 30.0 41.0 33 35.74227341783633 38.0 34.0 40.0 29.0 41.0 34 35.654157502097455 38.0 34.0 40.0 29.0 41.0 35 35.449944445704176 38.0 34.0 40.0 27.0 41.0 36 35.2441667989388 38.0 34.0 40.0 27.0 41.0 37 35.047776694406025 38.0 34.0 40.0 26.0 41.0 38 35.02848007981678 38.0 34.0 40.0 26.0 41.0 39 34.9336976485794 38.0 34.0 40.0 26.0 41.0 40 34.78483481100202 37.0 34.0 40.0 24.0 41.0 41 34.667921362327384 37.0 34.0 40.0 24.0 41.0 42 34.668080088886875 37.0 33.0 40.0 24.0 41.0 43 34.56731139883449 37.0 33.0 40.0 24.0 41.0 44 34.318722931452804 37.0 33.0 40.0 23.0 41.0 45 34.20103852520351 36.0 33.0 40.0 23.0 41.0 46 34.22178635405093 36.0 33.0 40.0 23.0 41.0 47 34.21176390558037 36.0 33.0 40.0 23.0 41.0 48 34.1630575270402 36.0 33.0 40.0 23.0 41.0 49 34.117525679689805 36.0 33.0 40.0 24.0 41.0 50 33.98380989093218 36.0 33.0 40.0 24.0 41.0 51 33.74977891657785 36.0 33.0 40.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 4.0 16 8.0 17 10.0 18 24.0 19 60.0 20 101.0 21 143.0 22 210.0 23 350.0 24 488.0 25 617.0 26 733.0 27 776.0 28 898.0 29 1075.0 30 1303.0 31 1736.0 32 2327.0 33 3594.0 34 4372.0 35 4512.0 36 5056.0 37 7637.0 38 6854.0 39 1212.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.525362236683975 23.95864039364187 29.16260402258452 15.353393347089636 2 29.595700777760143 23.98131561642593 33.28042448017052 13.14255912564341 3 29.37121607219791 24.060678896170153 33.28042448017052 13.287680551461417 4 26.362214008752638 27.78395047731344 30.126300990907236 15.72753452302669 5 21.833972018775086 35.91301784540033 29.094578354232333 13.158431781592252 6 21.55279925625269 39.97188272374776 27.31457336568332 11.160744654316229 7 37.31888165801229 57.93292669100474 3.866125484682887 0.8820661663000838 8 89.23153669984808 3.0339448085077434 6.401215391941226 1.3333030997029547 9 86.34498083943674 3.7686220267114123 7.362644837985534 2.5237522958663066 10 58.12793360694769 20.316999614521215 11.512210607469218 10.042856171061882 11 50.708600712001996 17.849935375615065 19.543774517584637 11.897689394798304 12 44.79263508763974 20.25124146844743 21.98816353370672 12.967959910206117 13 21.153715335253167 42.368653772023315 22.770458719756924 13.707172172966601 14 14.255912564340944 43.570440579578694 27.82023083376794 14.353416022312418 15 12.827373528944921 21.870252375229587 50.66325026643387 14.639123829391623 16 15.04274279494796 15.605088319992744 49.32994716673092 20.02222171832838 17 15.793292669100472 15.995102151878642 29.66599396839074 38.54561121063014 18 21.36686242942337 20.761433981088864 34.811002018094825 23.06070157139294 19 30.595678102537356 22.39405002154146 25.12187932246434 21.888392553456836 20 33.189723589034266 20.843064783111494 24.394004671095892 21.57320695675835 21 23.126459717466723 26.194417360150563 27.87238384617129 22.806739076211425 22 23.6502573637786 23.71148046529557 24.70238770095916 27.935874469966667 23 19.675290809732203 30.398403664316003 24.731865490578446 25.19444003537335 24 20.430375728441533 22.040316546110063 39.289358517947434 18.239949207500963 25 17.623183147774427 23.41670256910274 37.79732885875603 21.162785424366795 26 17.38509330854176 32.85866533638693 28.366703702863884 21.389537652207434 27 17.64132332600168 33.137570576630914 28.879163737783724 20.341942359583683 28 15.899866216185574 26.88601165506451 39.931067322736446 17.28305480601347 29 15.623228498219996 22.430330377995965 39.436747466043855 22.509693657740186 30 18.924740935579692 29.17167411169815 32.105847939956014 19.797737012766152 31 29.89047867395297 25.598059000929684 24.831636470828325 19.679825854289017 32 32.54347973968844 24.811228770322668 24.849776649055578 17.795514840933315 33 29.362145983084282 26.04476088977574 24.511915829573024 20.08117729756695 34 20.611777510714045 26.656991904945464 27.94040951452348 24.790821069817014 35 20.967778508423844 24.777215936146575 31.339425409854655 22.91558014557493 36 32.25550441033083 23.530078683023063 25.06065622094737 19.153760685698735 37 21.775016439536518 32.1013128953992 27.568535860864834 18.55513480419945 38 21.110632411963447 32.616040452597446 23.822589056937485 22.450738078501622 39 21.183193124872453 31.883630756672183 26.48012516722977 20.453050951225595 40 25.5323008548559 24.92233736196458 24.876986916396454 24.668374866783065 41 18.335185143194032 23.45071540327884 26.065168590281402 32.14893086324573 42 22.854357044057956 24.473367950840117 23.246638398222263 29.425636606879664 43 23.66386249744904 25.50055554295821 25.276070837395974 25.559511122196778 44 20.49613387451532 29.144463844357272 28.276002811727626 22.083399469399787 45 16.893040974127572 37.99460329697739 22.38724745470624 22.725108274188795 46 21.677512981565044 33.15117571030136 25.319153760685698 19.852157547447906 47 22.0879345139566 26.815718464433914 26.89281422189973 24.203532799709755 48 23.915557470352148 22.380444887871022 31.518559669848756 22.185437971928074 49 21.067549488673727 22.725108274188795 33.194258633591076 23.013083603546406 50 19.797737012766152 33.380195460420396 26.130926736355185 20.691140790458267 51 19.088002539624952 34.99693884492415 23.26704609872792 22.648012516722975 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6.0 1 28.5 2 51.0 3 185.0 4 319.0 5 246.5 6 174.0 7 182.5 8 191.0 9 188.0 10 185.0 11 182.5 12 180.0 13 188.0 14 196.0 15 180.0 16 164.0 17 161.0 18 158.0 19 151.5 20 145.0 21 147.0 22 149.0 23 163.0 24 177.0 25 206.0 26 284.5 27 334.0 28 395.0 29 456.0 30 558.0 31 660.0 32 767.0 33 874.0 34 932.5 35 991.0 36 1248.0 37 1505.0 38 1990.0 39 2475.0 40 3144.5 41 3814.0 42 4163.0 43 4512.0 44 4321.0 45 4130.0 46 3789.5 47 3449.0 48 3338.0 49 3227.0 50 3066.5 51 2906.0 52 2687.0 53 2468.0 54 2305.5 55 2143.0 56 2015.5 57 1888.0 58 1717.0 59 1546.0 60 1422.0 61 1298.0 62 1160.5 63 1023.0 64 861.0 65 699.0 66 606.5 67 514.0 68 425.0 69 336.0 70 279.0 71 222.0 72 173.0 73 124.0 74 106.5 75 64.5 76 40.0 77 35.0 78 30.0 79 22.0 80 14.0 81 8.5 82 3.0 83 2.0 84 1.0 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 44101.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.30935806444298 #Duplication Level Percentage of deduplicated Percentage of total 1 64.77803276094009 37.12387474206934 2 16.756350399620164 19.205913698102083 3 8.835166574345177 15.190131743044374 4 4.823138403102003 11.056438629509536 5 2.239455566985835 6.417088047890071 6 1.2977763709741237 4.462483843903766 7 0.6488881854870618 2.60311557561053 8 0.28487773996992954 1.306092832362078 9 0.1582654110944053 0.8163080202262987 >10 0.16617868164912558 1.1224235278111607 >50 0.007913270554720265 0.3696061313802408 >100 0.003956635277360132 0.3265232080905195 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 144 0.3265232080905195 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 82 0.1859368268293236 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 81 0.1836693045509172 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.004535044556812771 0.0 2 0.0 0.0 0.0 0.013605133670438313 0.0 3 0.0 0.0 0.0 0.02494274506247024 0.0 4 0.0 0.0 0.0 0.05215301240334686 0.0 5 0.0 0.0 0.0 0.08843336885784903 0.0 6 0.0 0.0 0.0 0.12244620303394481 0.0 7 0.0 0.0 0.0 0.1519239926532278 0.0 8 0.0 0.0 0.0 0.2970454184712365 0.0 9 0.0 0.0 0.0 0.346930908596177 0.0 10 0.0 0.0 0.0 0.41949162150518127 0.0 11 0.0 0.0 0.0 0.494319856692592 0.0 12 0.0 0.0 0.0 0.5782181809936283 0.0 13 0.0 0.0 0.0 0.6054284483345049 0.0 14 0.0 0.0 0.0 0.6190335820049432 0.0 15 0.0 0.0 0.0 0.6439763270674135 0.0 16 0.0 0.0 0.0 0.7029319063059795 0.0 17 0.0 0.0 0.0 0.7800276637717966 0.0 18 0.0 0.0 0.0 0.870728554908052 0.0 19 0.0 0.0 0.0 0.9024738668057414 0.0 20 0.0 0.0 0.0 0.9319516564250244 0.0 21 0.0 0.0 0.0 0.977302101993152 0.0 22 0.0 0.0 0.0 1.024920069839686 0.0 23 0.0 0.0 0.0 1.077073082243033 0.0 24 0.0 0.0 0.0 1.111085916419129 0.0 25 0.0 0.0 0.0 1.1496337951520375 0.0 26 0.0 0.0 0.0 1.1995192852769778 0.0 27 0.0 0.0 0.0 1.2720799981859823 0.0 28 0.0 0.0 0.0 1.3196979660325163 0.0 29 0.0 0.0 0.0 1.3491757556517994 0.0 30 0.0 0.0 0.0 1.4103988571687718 0.0 31 0.0 0.0 0.0 1.4897621369129952 0.0 32 0.0 0.0 0.0 1.5577878052651868 0.0 33 0.0 0.0 0.0 1.6167433845037527 0.0 34 0.0 0.0 0.0 1.6734314414639124 0.0 35 0.0 0.0 0.0 1.7459921543729167 0.0 36 0.0 0.0 0.0 1.811750300446702 0.0 37 0.0 0.0 0.0 1.8797759687988935 0.0 38 0.0 0.0 0.0 1.9455341148726786 0.0 39 0.0 0.0 0.0 2.006757216389651 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACAGG 20 6.9596677E-4 45.000004 3 TCGCGCA 20 6.9596677E-4 45.000004 34 GGCGATA 20 6.9596677E-4 45.000004 8 GTACATG 20 6.9596677E-4 45.000004 41 ACTCCTC 20 6.9596677E-4 45.000004 33 ATGAAGG 20 6.9596677E-4 45.000004 3 ATGAAAG 20 6.9596677E-4 45.000004 2 TAATGGG 35 1.1767952E-7 45.000004 3 AGTACAT 20 6.9596677E-4 45.000004 40 CGCAGTA 20 6.9596677E-4 45.000004 37 GGTAGTT 20 6.9596677E-4 45.000004 8 GCGCAGT 20 6.9596677E-4 45.000004 36 AAGGATG 40 6.5629138E-9 45.000004 6 CGTAAGG 20 6.9596677E-4 45.000004 3 AACAGGG 20 6.9596677E-4 45.000004 4 CAGGTGG 20 6.9596677E-4 45.000004 34 TGAAAGG 35 1.1767952E-7 45.000004 3 CCTCCGC 45 3.6743586E-10 45.0 45 CGTTTTT 90 0.0 45.0 1 CAATGAT 25 3.8299193E-5 44.999996 18 >>END_MODULE