##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546382_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 47596 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.98472560719388 31.0 31.0 33.0 30.0 33.0 2 31.14530632826288 31.0 31.0 33.0 30.0 34.0 3 31.133519623497772 31.0 31.0 34.0 28.0 34.0 4 35.09836961089167 35.0 35.0 37.0 32.0 37.0 5 32.80305067652744 35.0 35.0 37.0 28.0 37.0 6 33.984998739389866 35.0 35.0 37.0 28.0 37.0 7 15.289478107403983 0.0 0.0 35.0 0.0 37.0 8 24.88406588788974 17.0 17.0 35.0 17.0 37.0 9 32.737246827464496 32.0 32.0 37.0 27.0 39.0 10 35.558576350953864 37.0 35.0 37.0 32.0 39.0 11 36.42995209681486 37.0 35.0 39.0 32.0 39.0 12 36.104588620892514 37.0 35.0 39.0 32.0 39.0 13 35.62589293217918 37.0 35.0 39.0 31.0 39.0 14 36.649466341709385 39.0 35.0 40.0 31.0 41.0 15 37.10666862761577 39.0 35.0 40.0 32.0 41.0 16 37.18482645600471 39.0 35.0 41.0 32.0 41.0 17 37.226636692159005 39.0 35.0 41.0 32.0 41.0 18 37.071497604840744 39.0 35.0 40.0 32.0 41.0 19 36.976258509118416 39.0 35.0 40.0 31.0 41.0 20 37.10271871585847 39.0 35.0 40.0 32.0 41.0 21 36.929510883267504 39.0 35.0 40.0 32.0 41.0 22 36.98279267165308 39.0 35.0 40.0 32.0 41.0 23 37.01888814186066 39.0 35.0 40.0 32.0 41.0 24 36.897260273972606 38.0 35.0 40.0 32.0 41.0 25 36.62463232204387 38.0 35.0 40.0 31.0 41.0 26 36.4327884696193 38.0 35.0 40.0 31.0 41.0 27 36.27199764686108 38.0 35.0 40.0 31.0 41.0 28 36.24294058324229 38.0 35.0 40.0 30.0 41.0 29 36.28664173459955 38.0 35.0 40.0 31.0 41.0 30 36.08084713001092 38.0 35.0 40.0 30.0 41.0 31 35.95279015043281 38.0 34.0 40.0 30.0 41.0 32 35.81252626271115 38.0 34.0 40.0 30.0 41.0 33 35.618350281536266 38.0 34.0 40.0 29.0 41.0 34 35.465144129758805 38.0 34.0 40.0 28.0 41.0 35 35.28130515169342 38.0 34.0 40.0 27.0 41.0 36 35.12307756954366 38.0 34.0 40.0 26.0 41.0 37 34.90259685687873 37.0 34.0 40.0 25.0 41.0 38 34.90236574502059 37.0 34.0 40.0 26.0 41.0 39 34.780989999159594 37.0 33.0 40.0 25.0 41.0 40 34.57412387595596 37.0 33.0 40.0 24.0 41.0 41 34.50621901000084 37.0 33.0 40.0 24.0 41.0 42 34.44257920833684 37.0 33.0 40.0 24.0 41.0 43 34.32958651987562 37.0 33.0 40.0 23.0 41.0 44 34.1403059080595 36.0 33.0 40.0 23.0 41.0 45 34.01334145726532 36.0 33.0 40.0 23.0 41.0 46 34.04542398520884 36.0 33.0 40.0 23.0 41.0 47 34.01140852172451 36.0 33.0 40.0 23.0 41.0 48 34.00455920665602 36.0 33.0 40.0 23.0 41.0 49 33.88730145390369 36.0 33.0 40.0 23.0 41.0 50 33.72720396671989 35.0 33.0 40.0 23.0 41.0 51 33.54031851416085 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 2.0 15 5.0 16 5.0 17 12.0 18 30.0 19 59.0 20 106.0 21 158.0 22 264.0 23 377.0 24 489.0 25 680.0 26 798.0 27 906.0 28 995.0 29 1266.0 30 1452.0 31 1920.0 32 2560.0 33 3955.0 34 4891.0 35 4960.0 36 5333.0 37 7984.0 38 7049.0 39 1339.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.273552399361293 24.470543743171692 29.750399193209514 15.505504664257499 2 30.571896798050258 23.800319354567613 32.0447096394655 13.583074207916631 3 30.088662912849816 22.291789225985376 34.21295907219094 13.406588788973863 4 26.82998571308513 27.68930162198504 30.34918900747962 15.131523657450204 5 21.60895873602824 36.26355155895453 28.05277754433146 14.07471216068577 6 21.688797377930918 40.03067484662577 27.180855534078496 11.09967224136482 7 38.423396924111266 56.71274897050173 3.8217497268678042 1.0421043785192032 8 89.92772501890916 2.720816875367678 5.859736112278343 1.4917219934448274 9 87.07664509622657 3.2292629632742242 7.082527943524666 2.6115639969745357 10 61.045045802168254 17.383813765862676 11.08916715690394 10.481973275065132 11 52.691402638877214 17.736784603748216 17.04134801243802 12.530464744936548 12 45.4302882595176 19.898730985797126 21.831666526598877 12.839314228086392 13 20.50382385074376 42.68005714765947 22.77712412807799 14.038994873518785 14 14.257500630305067 42.94898730985797 28.416253466677873 14.37725859315909 15 13.213295234893687 20.592066560215144 51.95814774350785 14.236490461383308 16 14.74703756618203 14.333137238423395 50.558870493318764 20.360954702075805 17 16.51399277250189 15.28489789057904 28.46667787209009 39.73443146482898 18 22.705689553744012 20.316833347340115 34.47558618371292 22.501890915202956 19 30.96058492310278 21.17614925624002 25.51685015547525 22.346415665181947 20 35.292881754769304 19.894528952012774 23.905370199176403 20.907219094041515 21 23.21413564165056 27.000168081351372 27.05059248676359 22.735103790234472 22 23.815026472812843 22.604840742919574 25.136566097991427 28.443566686276156 23 20.62358181359778 29.166316497184635 23.758299016724095 26.451802672493486 24 21.037482141356417 20.46810656357677 39.58736028237667 18.907051012690143 25 17.8334313807883 22.40524413816287 37.25943356584587 22.501890915202956 26 17.38801579964703 33.62467434238171 27.697705689553743 21.289604168417515 27 18.640221867383815 33.21077401462308 28.807042608622574 19.341961509370538 28 15.70720228590638 26.6240860576519 40.028573829733595 17.640137826708127 29 16.640053786032443 23.096478695688713 39.48861248844441 20.77485502983444 30 19.02260694175981 28.84906294646609 31.86192116984621 20.266408941927892 31 32.39557946045886 24.044037314060006 24.2877552735524 19.272627951928733 32 33.80956382889318 24.035633246491305 24.43902848978906 17.715774434826457 33 31.366081183292714 25.336162702748133 23.163711236238342 20.134044877720818 34 21.575342465753426 25.941255567694764 26.95184469283133 25.53155727372048 35 22.44096142532986 24.15329019245315 30.58450289940331 22.821245482813683 36 33.48390621060594 21.913606185393732 25.344566770316835 19.257920833683503 37 22.237162786788804 31.02571644676023 27.903605344986975 18.83351542146399 38 21.901000084040675 32.90822758214976 22.031263131355576 23.159509202453986 39 21.749726867804018 31.83250693335574 25.38868812505253 21.029078073787712 40 26.216488780569797 24.619715942516176 23.516682074123878 25.647113202790152 41 18.886040843768384 23.331792587612405 25.93285150012606 31.84931506849315 42 23.426338347760318 23.350701739641988 23.586015631565676 29.63694428103202 43 24.737372888478024 24.502058996554332 23.455752584250778 27.30481553071687 44 21.19085637448525 29.9163795276914 26.75855113875116 22.13421295907219 45 18.463736448441047 37.09975628204051 21.545928229262966 22.890579040255485 46 23.146903101100932 31.952264896209766 24.962181695940835 19.938650306748464 47 22.869568871333726 26.15345827380452 26.216488780569797 24.76048407429196 48 25.533658290612653 21.285402134633163 31.023615429868055 22.157324144886125 49 21.928313303638962 21.705605513068324 33.3998655349189 22.966215648373815 50 19.732750651315236 33.73182620388268 25.850911841331204 20.684511303470877 51 19.543659131019414 34.44617194722245 22.934700394991175 23.075468526766954 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 15.0 1 36.0 2 57.0 3 217.0 4 377.0 5 287.5 6 198.0 7 192.0 8 186.0 9 210.0 10 234.0 11 227.0 12 220.0 13 203.5 14 187.0 15 184.0 16 181.0 17 164.5 18 148.0 19 138.0 20 128.0 21 134.5 22 141.0 23 156.0 24 171.0 25 197.5 26 220.5 27 217.0 28 268.5 29 320.0 30 389.0 31 458.0 32 551.5 33 645.0 34 725.5 35 806.0 36 1014.5 37 1223.0 38 1858.0 39 2493.0 40 3380.0 41 4267.0 42 4514.5 43 4762.0 44 4556.0 45 4350.0 46 4086.0 47 3822.0 48 3644.0 49 3466.0 50 3391.5 51 3317.0 52 3042.5 53 2768.0 54 2581.0 55 2394.0 56 2313.0 57 2232.0 58 2092.5 59 1953.0 60 1820.5 61 1688.0 62 1449.0 63 1210.0 64 1080.5 65 951.0 66 789.0 67 627.0 68 530.5 69 434.0 70 380.0 71 326.0 72 253.5 73 181.0 74 139.0 75 77.5 76 58.0 77 44.5 78 31.0 79 24.0 80 17.0 81 12.5 82 8.0 83 5.5 84 3.0 85 3.0 86 3.0 87 1.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 47596.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.17060257164468 #Duplication Level Percentage of deduplicated Percentage of total 1 63.947598918466056 35.280275653416254 2 15.857420313035531 17.49726867804017 3 9.128298868959215 15.108412471636273 4 5.148710918161392 11.362299352886797 5 2.749533493278495 7.584670980754685 6 1.4813968544118208 4.903773426338347 7 0.7045203549259302 2.720816875367678 8 0.44556152176396663 1.9665518110765612 9 0.22849308808408544 1.134549121774939 >10 0.2970410145093111 1.909824354987814 >50 0.007616436269469516 0.31725355071854777 >100 0.003808218134734758 0.21430372300193296 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 102 0.21430372300193296 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 86 0.18068745272711995 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 65 0.13656609799142785 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.006303050676527439 0.0 2 0.0 0.0 0.0 0.014707118245230692 0.0 3 0.0 0.0 0.0 0.025212202706109757 0.0 4 0.0 0.0 0.0 0.035717287166988826 0.0 5 0.0 0.0 0.0 0.06723254054962602 0.0 6 0.0 0.0 0.0 0.11345491217749391 0.0 7 0.0 0.0 0.0 0.1449701655601311 0.0 8 0.0 0.0 0.0 0.2899403311202622 0.0 9 0.0 0.0 0.0 0.33196066896377846 0.0 10 0.0 0.0 0.0 0.42230439532733843 0.0 11 0.0 0.0 0.0 0.5231532061517774 0.0 12 0.0 0.0 0.0 0.6155979494075132 0.0 13 0.0 0.0 0.0 0.6660223548197327 0.0 14 0.0 0.0 0.0 0.684931506849315 0.0 15 0.0 0.0 0.0 0.7143457433397764 0.0 16 0.0 0.0 0.0 0.7710731994285234 0.0 17 0.0 0.0 0.0 0.8509118413312043 0.0 18 0.0 0.0 0.0 0.9286494663417094 0.0 19 0.0 0.0 0.0 0.9748718379695773 0.0 20 0.0 0.0 0.0 1.0168921758130935 0.0 21 0.0 0.0 0.0 1.0820236994705437 0.0 22 0.0 0.0 0.0 1.1324481048827633 0.0 23 0.0 0.0 0.0 1.2101857298932683 0.0 24 0.0 0.0 0.0 1.2669131859820153 0.0 25 0.0 0.0 0.0 1.3194386082864107 0.0 26 0.0 0.0 0.0 1.3782670812673334 0.0 27 0.0 0.0 0.0 1.4286914866795528 0.0 28 0.0 0.0 0.0 1.4812169089839482 0.0 29 0.0 0.0 0.0 1.5274392806118162 0.0 30 0.0 0.0 0.0 1.5841667367005632 0.0 31 0.0 0.0 0.0 1.651399277250189 0.0 32 0.0 0.0 0.0 1.7018236826624087 0.0 33 0.0 0.0 0.0 1.7585511387511557 0.0 34 0.0 0.0 0.0 1.8278846961929573 0.0 35 0.0 0.0 0.0 1.9035213043112866 0.0 36 0.0 0.0 0.0 1.966551811076561 0.0 37 0.0 0.0 0.0 2.025380284057484 0.0 38 0.0 0.0 0.0 2.0926128246071096 0.0 39 0.0 0.0 0.0 2.1325321455584505 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATACAT 25 3.8344868E-5 45.000004 22 CAACTAG 25 3.8344868E-5 45.000004 16 TACGGGG 25 3.8344868E-5 45.000004 4 CACAACT 25 3.8344868E-5 45.000004 14 GGCCGAT 30 2.1217638E-6 45.000004 8 AGGGCAA 25 3.8344868E-5 45.000004 7 CATCAAC 25 3.8344868E-5 45.000004 26 TACATCA 25 3.8344868E-5 45.000004 24 CCACAAC 25 3.8344868E-5 45.000004 13 TGCTAGG 25 3.8344868E-5 45.000004 3 AAGGATC 25 3.8344868E-5 45.000004 6 CTAGATA 25 3.8344868E-5 45.000004 19 TGGGATG 25 3.8344868E-5 45.000004 6 ATACATC 25 3.8344868E-5 45.000004 23 CCTAGGG 25 3.8344868E-5 45.000004 4 ACAACTA 25 3.8344868E-5 45.000004 15 TAGATAC 25 3.8344868E-5 45.000004 20 ATTTATC 25 3.8344868E-5 45.000004 36 GTACGGG 25 3.8344868E-5 45.000004 3 AACATGA 25 3.8344868E-5 45.000004 30 >>END_MODULE