SRR1546360_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1546360_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1743055
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	9479	0.5438153127698209	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8716	0.5000415936387549	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCATAAC	20	7.03429E-4	45.000004	32
TTCTACG	20	7.03429E-4	45.000004	1
GGTACGA	20	7.03429E-4	45.000004	2
AGTTTCG	20	7.03429E-4	45.000004	1
ACGTTCC	40	6.8193913E-9	45.000004	10
GCGAAGT	20	7.03429E-4	45.000004	13
GTTTAAC	20	7.03429E-4	45.000004	42
CACGACC	80	0.0	45.000004	27
TCGATAT	20	7.03429E-4	45.000004	42
TTATCCG	20	7.03429E-4	45.000004	38
CGGATAT	20	7.03429E-4	45.000004	2
TCTAACG	40	6.8193913E-9	45.000004	1
TATAGCG	230	0.0	45.000004	1
CGTCGGA	20	7.03429E-4	45.000004	18
CGTCGAG	20	7.03429E-4	45.000004	26
TCGAGTG	40	6.8193913E-9	45.000004	31
CGCGTGT	20	7.03429E-4	45.000004	20
CGCAATC	20	7.03429E-4	45.000004	22
GCTAACC	20	7.03429E-4	45.000004	40
TTCGCGA	40	6.8193913E-9	45.000004	16