SRR1546359_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1546359_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2055644
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	11917	0.5797210022747129	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8458	0.411452566689563	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCTTCGA	35	1.2125565E-7	45.000004	23
TCTGCGA	35	1.2125565E-7	45.000004	1
AACGTTC	30	2.16634E-6	45.000004	14
TTGATCG	30	2.16634E-6	45.000004	39
ACGTTGC	60	0.0	45.000004	33
GCGCGTT	35	1.2125565E-7	45.000004	43
ACGTTAG	75	0.0	45.000004	1
GCAACTA	35	1.2125565E-7	45.000004	34
CGCATCG	35	1.2125565E-7	45.000004	21
GACCGGA	35	1.2125565E-7	45.000004	13
CACGCGA	30	2.16634E-6	45.000004	34
TCTAGTA	30	2.16634E-6	45.000004	30
CTGCGTA	30	2.16634E-6	45.000004	1
CATTACG	30	2.16634E-6	45.000004	33
TACGCTA	35	1.2125565E-7	45.000004	21
TCGGAAA	30	2.16634E-6	45.000004	43
TCTACCG	30	2.16634E-6	45.000004	15
CGTACTC	30	2.16634E-6	45.000004	43
CAATCGT	70	0.0	45.000004	13
TCGAATC	30	2.16634E-6	45.000004	12