##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546337_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1034850 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.06710247862009 31.0 31.0 33.0 30.0 34.0 2 31.401673672512924 31.0 31.0 34.0 30.0 34.0 3 31.499616369522155 31.0 31.0 34.0 30.0 34.0 4 35.363338648113256 37.0 35.0 37.0 33.0 37.0 5 35.2564197709813 37.0 35.0 37.0 33.0 37.0 6 35.293571048944294 37.0 35.0 37.0 32.0 37.0 7 35.72164564912789 37.0 35.0 37.0 35.0 37.0 8 35.6164642218679 37.0 35.0 37.0 35.0 37.0 9 37.36553316905832 39.0 37.0 39.0 35.0 39.0 10 36.81603324153259 39.0 37.0 39.0 32.0 39.0 11 36.535112335121035 39.0 35.0 39.0 32.0 39.0 12 35.88246315891192 37.0 35.0 39.0 31.0 39.0 13 35.59795332656907 37.0 35.0 39.0 30.0 39.0 14 36.50843213992366 38.0 35.0 40.0 31.0 41.0 15 36.76760496690341 38.0 35.0 41.0 31.0 41.0 16 36.856663284533994 38.0 35.0 41.0 32.0 41.0 17 36.78168430207276 38.0 35.0 40.0 31.0 41.0 18 36.74064550417935 38.0 35.0 40.0 31.0 41.0 19 36.62428371261535 38.0 35.0 40.0 31.0 41.0 20 36.46963714548002 38.0 35.0 40.0 31.0 41.0 21 36.32037783253612 38.0 35.0 40.0 31.0 41.0 22 36.19673285983476 38.0 35.0 40.0 30.0 41.0 23 36.13897376431367 38.0 35.0 40.0 30.0 41.0 24 36.13612117698217 38.0 35.0 40.0 30.0 41.0 25 36.047070589940574 38.0 35.0 40.0 30.0 41.0 26 35.91567860076339 38.0 34.0 40.0 30.0 41.0 27 35.80184954341209 37.0 34.0 40.0 30.0 41.0 28 35.735704691501184 37.0 34.0 40.0 29.0 41.0 29 35.66118278011306 37.0 34.0 40.0 29.0 41.0 30 35.51342899937189 37.0 34.0 40.0 29.0 41.0 31 35.33212542880611 37.0 34.0 40.0 28.0 41.0 32 35.15049524085616 37.0 34.0 40.0 27.0 41.0 33 34.98597671160071 37.0 34.0 40.0 26.0 41.0 34 34.77281345122481 37.0 34.0 40.0 25.0 41.0 35 34.58680485094458 37.0 33.0 40.0 24.0 41.0 36 34.37088950089385 36.0 33.0 40.0 23.0 41.0 37 34.17266946900517 36.0 33.0 40.0 23.0 41.0 38 34.064788133545925 36.0 33.0 40.0 23.0 41.0 39 33.97974489056385 36.0 33.0 40.0 23.0 41.0 40 33.75553365222013 36.0 33.0 40.0 22.0 41.0 41 33.654043581195346 35.0 32.0 40.0 22.0 41.0 42 33.51278929313427 35.0 32.0 40.0 21.0 41.0 43 33.45856114412717 35.0 32.0 40.0 22.0 41.0 44 33.278701261052326 35.0 32.0 40.0 21.0 41.0 45 33.23362226409625 35.0 32.0 39.0 21.0 41.0 46 33.13435860269604 35.0 32.0 39.0 20.0 41.0 47 33.04945354399188 35.0 32.0 39.0 20.0 41.0 48 32.95751171667391 35.0 32.0 39.0 20.0 41.0 49 32.92135381939411 35.0 31.0 39.0 20.0 41.0 50 32.75603420785621 35.0 31.0 39.0 20.0 41.0 51 32.5462820698652 35.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 5.0 13 6.0 14 24.0 15 58.0 16 153.0 17 337.0 18 713.0 19 1459.0 20 2575.0 21 4055.0 22 5992.0 23 8450.0 24 11581.0 25 15585.0 26 20098.0 27 22983.0 28 25097.0 29 28273.0 30 32852.0 31 38900.0 32 47232.0 33 60137.0 34 96820.0 35 124888.0 36 79828.0 37 98689.0 38 135498.0 39 172537.0 40 20.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.096487413634826 22.39029811083732 28.172585398850075 14.34062907667778 2 32.072184374547035 24.7481277479828 30.014494854326713 13.165193023143452 3 29.988114219452093 24.879741025269364 31.876600473498574 13.255544281779969 4 26.261583804416098 27.651930231434505 30.703870126105233 15.382615838044162 5 23.27738319563222 31.78315697927236 30.365463593757546 14.573996231337874 6 19.86374836932889 41.25680050248828 27.84741750012079 11.032033628062038 7 87.33323670097116 3.859496545393052 6.980045417210223 1.827221336425569 8 88.15896023578297 2.830555152920713 6.528482388751993 2.48200222254433 9 84.00492825047108 4.057592887858143 8.724839348697879 3.2126395129728946 10 47.6135671836498 24.12871430642122 14.662511475093009 13.595207034835965 11 39.62294052278108 22.666859931391024 21.958641348987776 15.75155819684012 12 36.42498912885925 20.47900661931681 26.586751703145385 16.509252548678553 13 23.633956612069383 31.716867178818188 26.89452577668261 17.754650432429823 14 18.50780306324588 35.058220998212306 28.430207276416873 18.003768662124944 15 17.095714354737403 22.454075469874862 42.746195100739236 17.7040150746485 16 19.36908730733923 18.680871623906846 39.90665313813596 22.043387930617964 17 19.23621780934435 19.49915446683094 29.420882253466687 31.84374547035802 18 23.091462530801564 21.991109822679615 32.383050683673964 22.534376962844856 19 27.815335555877663 24.478040295695028 25.14799246267575 22.55863168575156 20 29.364642218679037 23.00816543460405 24.992124462482483 22.63506788423443 21 24.668599313910228 26.554959655988792 27.220756631395854 21.55568439870513 22 24.237329081509397 23.223848866985552 25.64980431946659 26.88901773203846 23 21.54747064791999 27.719959414407885 25.180267671643236 25.552302266028892 24 22.047446489829444 23.649224525293523 34.08919167029038 20.214137314586655 25 21.27622360728608 23.900178769870028 31.355655408996476 23.46794221384742 26 19.690389911581388 28.285258733149732 27.413828091027685 24.610523264241195 27 20.508092960332416 27.817558100207762 28.53176788906605 23.142581050393776 28 18.99183456539595 25.66729477702082 34.53167125670387 20.809199400879354 29 19.725177561965502 23.26018263516452 33.022080494757695 23.992559308112288 30 21.46330386046287 25.865004590037206 30.801951973715997 21.86973957578393 31 27.389959897569693 24.301879499444365 24.504614195294003 23.803546407691936 32 28.022515340387493 24.092573802966612 25.487655215731746 22.397255640914143 33 26.09489297965889 24.667246460839735 25.43151181330628 23.8063487461951 34 20.915978161086148 24.601826351645165 28.837222785911003 25.64497270135768 35 21.650480746001836 23.711359134174035 30.325264531091463 24.312895588732665 36 28.37358071218051 24.05720635840943 26.112769966661837 21.456442962748223 37 22.82920229985022 28.81818621056192 26.903609218727354 21.44900227086051 38 22.886988452432718 28.957433444460552 25.28076532830845 22.87481277479828 39 22.408851524375514 28.337826738174616 25.780741170217908 23.472580567231965 40 23.880369135623518 24.16659419239503 27.446779726530412 24.50625694545103 41 20.45813402908634 23.307629124993962 27.32347683239117 28.91076001352853 42 23.777745566990387 24.688022418708027 24.36758950572547 27.16664250857612 43 22.90167657148379 24.83799584480843 25.93013480214524 26.330192781562545 44 22.183118326327484 26.69179108083297 27.202589747306373 23.92250084553317 45 20.646857032420158 30.094506450210172 25.549403295163554 23.709233222206116 46 23.26308160602986 27.504469246750734 27.900565299318743 21.331883847900663 47 23.108083297096197 25.378074117021793 27.432768034014593 24.08107455186742 48 23.535681499734263 23.946272406628978 28.38672271343673 24.13132338020003 49 22.34816640092767 23.187804995893124 30.352998019036576 24.11103058414263 50 21.029134657196696 27.24578441319998 28.86669565637532 22.858385273228006 51 20.65381456249698 28.93211576556989 26.234816640092767 24.179253031840364 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 368.0 1 741.5 2 1115.0 3 4735.0 4 8355.0 5 6210.5 6 4066.0 7 4145.0 8 4224.0 9 4342.0 10 4460.0 11 4418.5 12 4377.0 13 4079.5 14 3782.0 15 3667.5 16 3553.0 17 3303.0 18 3053.0 19 2984.0 20 2915.0 21 2930.5 22 2946.0 23 3205.5 24 3465.0 25 3857.5 26 5174.5 27 6099.0 28 7290.5 29 8482.0 30 9516.0 31 10550.0 32 12980.0 33 15410.0 34 19066.0 35 22722.0 36 22711.5 37 22701.0 38 27208.0 39 31715.0 40 42932.5 41 54150.0 42 64353.5 43 74557.0 44 78573.5 45 82590.0 46 86668.5 47 90747.0 48 88420.5 49 86094.0 50 84025.5 51 81957.0 52 76184.5 53 70412.0 54 65038.5 55 59665.0 56 54825.0 57 49985.0 58 49117.5 59 48250.0 60 46000.0 61 43750.0 62 39884.5 63 36019.0 64 32443.0 65 28867.0 66 25176.5 67 21486.0 68 16937.0 69 12388.0 70 11106.0 71 9824.0 72 7894.0 73 5964.0 74 5057.0 75 3435.0 76 2720.0 77 1986.0 78 1252.0 79 934.0 80 616.0 81 518.0 82 420.0 83 333.0 84 246.0 85 158.5 86 71.0 87 49.0 88 27.0 89 25.0 90 23.0 91 14.5 92 6.0 93 4.5 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1034850.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.439217746467925 #Duplication Level Percentage of deduplicated Percentage of total 1 79.24626214930105 18.574703941111466 2 6.227034833286538 2.919136507444875 3 2.4483446976642456 1.7216185346088733 4 1.4663480444603343 1.3748020442485283 5 1.0253100967870825 1.2016233308122266 6 0.7648880738004344 1.0757026868090886 7 0.6228599291648279 1.0219544653670791 8 0.5348293633223973 1.002878552329478 9 0.41941880760554245 0.8847763882587222 >10 5.06995230529416 27.543536183398835 >50 1.7716673692532134 29.66346048798032 >100 0.3993597315278101 11.966731737472255 >500 0.0028969099696317833 0.4488276165984479 >1k 8.276885627519381E-4 0.6002475235598003 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4489 0.4337826738174615 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1699 0.16417838334058077 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04677006329419723 0.0 2 0.0 0.0 0.0 0.19200850364787167 0.0 3 0.0 0.0 0.0 0.2715369377204426 0.0 4 0.0 0.0 0.0 0.42798473208677584 0.0 5 0.0 0.0 0.0 0.7577909842006088 0.0 6 0.0 0.0 0.0 1.1901241725853988 0.0 7 0.0 0.0 0.0 1.4947093781707494 0.0 8 0.0 0.0 0.0 2.4606464705029714 0.0 9 0.0 0.0 0.0 2.9092138957336813 0.0 10 0.0 0.0 0.0 3.550272986423153 0.0 11 0.0 0.0 0.0 3.899695608059139 0.0 12 0.0 0.0 0.0 4.268348069768566 0.0 13 0.0 0.0 0.0 4.408754892013335 0.0 14 0.0 0.0 0.0 4.456491278929313 0.0 15 0.0 0.0 0.0 4.521911388123883 0.0 16 0.0 0.0 0.0 4.661835048557762 0.0 17 0.0 0.0 0.0 4.820698651978548 0.0 18 0.0 0.0 0.0 5.105570855679567 0.0 19 0.0 0.0 0.0 5.204715659274291 0.0 20 0.0 0.0 0.0 5.342416775378074 0.0 21 0.0 0.0 0.0 5.482726965260666 0.0 22 0.0 0.0 0.0 5.62951152340919 0.0 23 0.0 0.0 0.0 5.793110112576702 0.0 24 0.0 0.0 0.0 5.927718993090786 0.0 25 0.0 0.0 0.0 6.025800840701551 0.0 26 0.0 0.0 0.0 6.121853408706576 0.0 27 0.0 0.0 0.0 6.223897183166643 0.0 28 0.0 0.0 0.0 6.325651060540175 0.0 29 0.0 0.0 0.0 6.440836836256462 0.0 30 0.0 0.0 0.0 6.608977146446345 0.0 31 0.0 0.0 0.0 6.726965260665797 0.0 32 0.0 0.0 0.0 6.845339904333962 0.0 33 0.0 0.0 0.0 6.960235782963714 0.0 34 0.0 0.0 0.0 7.088853457022757 0.0 35 0.0 0.0 0.0 7.254094796347297 0.0 36 0.0 0.0 0.0 7.376334734502585 0.0 37 0.0 0.0 0.0 7.500024158090545 0.0 38 0.0 0.0 0.0 7.64371648064937 0.0 39 0.0 0.0 0.0 7.8236459390249795 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAC 25 3.8905346E-5 45.000004 24 GATCGAC 25 3.8905346E-5 45.000004 45 TGTTACG 60 0.0 45.000004 1 AACCGAT 20 7.0329616E-4 45.0 16 ACACCGT 20 7.0329616E-4 45.0 40 CTAAGCG 20 7.0329616E-4 45.0 1 TAACGCG 20 7.0329616E-4 45.0 1 CACTCGC 35 1.2117744E-7 45.0 22 ACTCGAC 20 7.0329616E-4 45.0 38 CACGTAC 20 7.0329616E-4 45.0 25 GTTGCGT 20 7.0329616E-4 45.0 26 GCGTAAG 65 0.0 44.999996 1 CGTTTTT 3355 0.0 43.457527 1 TACGCGG 115 0.0 43.04348 2 GCGATAC 85 0.0 42.35294 9 TCGTAAA 80 0.0 42.1875 15 TCGTTAG 65 0.0 41.53846 1 CTATGCG 60 3.6379788E-12 41.250004 1 GCGATAT 110 0.0 40.909092 9 CGGTCTA 155 0.0 40.645164 31 >>END_MODULE