##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546329_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1297680 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.137946180876643 31.0 31.0 33.0 30.0 34.0 2 31.47778265828247 31.0 31.0 34.0 30.0 34.0 3 31.575738240552372 31.0 31.0 34.0 30.0 34.0 4 35.429702237839834 37.0 35.0 37.0 33.0 37.0 5 35.345718513038655 37.0 35.0 37.0 33.0 37.0 6 35.376023364774056 37.0 35.0 37.0 33.0 37.0 7 35.780177701744655 37.0 35.0 37.0 35.0 37.0 8 35.673642962825966 37.0 35.0 37.0 35.0 37.0 9 37.39448400221934 39.0 37.0 39.0 35.0 39.0 10 36.89569154182849 39.0 37.0 39.0 32.0 39.0 11 36.62323916527958 39.0 35.0 39.0 32.0 39.0 12 36.06938690586277 37.0 35.0 39.0 32.0 39.0 13 35.822356821404355 38.0 35.0 39.0 31.0 39.0 14 36.76875809136305 39.0 35.0 41.0 31.0 41.0 15 36.994428518587014 39.0 35.0 41.0 32.0 41.0 16 37.041408513655135 39.0 35.0 41.0 32.0 41.0 17 36.959681893841314 38.0 35.0 41.0 32.0 41.0 18 36.890136243141605 38.0 35.0 40.0 31.0 41.0 19 36.79357776955798 38.0 35.0 40.0 31.0 41.0 20 36.661485882498 38.0 35.0 40.0 31.0 41.0 21 36.49919779914925 38.0 35.0 40.0 31.0 41.0 22 36.397281302015905 38.0 35.0 40.0 31.0 41.0 23 36.316917884224154 38.0 35.0 40.0 30.0 41.0 24 36.28887167868812 38.0 35.0 40.0 30.0 41.0 25 36.22243773503483 38.0 35.0 40.0 30.0 41.0 26 36.122961747117934 38.0 35.0 40.0 30.0 41.0 27 36.004259909993216 38.0 35.0 40.0 30.0 41.0 28 35.961306331298935 38.0 35.0 40.0 30.0 41.0 29 35.875070125146415 38.0 35.0 40.0 30.0 41.0 30 35.710477159238025 37.0 34.0 40.0 29.0 41.0 31 35.521378922384564 37.0 34.0 40.0 29.0 41.0 32 35.36514009617163 37.0 34.0 40.0 27.0 41.0 33 35.16260942605265 37.0 34.0 40.0 27.0 41.0 34 34.940840577029775 37.0 34.0 40.0 25.0 41.0 35 34.73697213488688 37.0 33.0 40.0 24.0 41.0 36 34.556411441957955 37.0 33.0 40.0 24.0 41.0 37 34.39141699032119 37.0 33.0 40.0 23.0 41.0 38 34.312744282103445 37.0 33.0 40.0 23.0 41.0 39 34.25806670365576 36.0 33.0 40.0 23.0 41.0 40 34.057134270390236 36.0 33.0 40.0 23.0 41.0 41 33.964717033475125 36.0 33.0 40.0 23.0 41.0 42 33.84282180506751 36.0 33.0 40.0 22.0 41.0 43 33.79918392824117 36.0 33.0 40.0 23.0 41.0 44 33.61941387707293 35.0 32.0 40.0 22.0 41.0 45 33.59044525614944 35.0 32.0 40.0 22.0 41.0 46 33.48592565193268 35.0 32.0 40.0 22.0 41.0 47 33.41200064730904 35.0 32.0 40.0 22.0 41.0 48 33.33329172060909 35.0 32.0 39.0 21.0 41.0 49 33.32331776709204 35.0 32.0 39.0 21.0 41.0 50 33.199880556069296 35.0 32.0 39.0 21.0 41.0 51 32.99893271068368 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 3.0 11 8.0 12 8.0 13 8.0 14 24.0 15 51.0 16 157.0 17 393.0 18 905.0 19 1696.0 20 2951.0 21 4614.0 22 6617.0 23 9457.0 24 13043.0 25 18398.0 26 23849.0 27 27636.0 28 29999.0 29 33830.0 30 39075.0 31 46437.0 32 56738.0 33 72305.0 34 114977.0 35 148667.0 36 101327.0 37 127701.0 38 179609.0 39 237166.0 40 29.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.39468898341656 22.986252388878615 28.42195302385796 14.197105603846866 2 32.57205166142654 24.781379076505765 29.217603723568214 13.428965538499476 3 29.432911041242832 25.244359164046603 31.322822267431107 13.999907527279454 4 26.00972504777757 27.507783120646078 30.82269897047038 15.659792861105974 5 23.38373096603169 31.446119228161024 29.8041890142408 15.365960791566488 6 21.267338635102647 40.60985759201036 27.342025769064794 10.780778003822206 7 86.36212317366378 4.191171937611738 7.508630787251095 1.9380741014733989 8 87.05220085074903 3.47003883854263 7.3122803772887 2.165479933419641 9 81.7160625115591 5.5284045373281545 9.477220886505147 3.2783120646076074 10 44.94220454965785 25.810831638000124 16.019588804635966 13.22737500770606 11 38.09537019912459 24.020097404598978 22.319986437334318 15.56454595894211 12 33.72510942605265 22.741584982430183 27.413538006288146 16.119767585229024 13 23.712163245176008 31.84698847173417 27.405061340237964 17.035786942851857 14 19.195487331237285 34.64251587448369 28.989041982615127 17.172954811663892 15 18.306516244374578 23.370245360951852 40.804897971764994 17.518340422908576 16 20.30708649281795 20.20251525799889 39.023025707416316 20.467372541766846 17 20.379754639048148 20.05532951112755 29.700311324825847 29.864604524998462 18 23.391051723075027 22.727791134948525 32.531132482584304 21.350024659392147 19 28.432279144319097 23.98102768016768 26.545835645151346 21.040857530361876 20 30.52177732568892 23.585706799827385 25.358331792121326 20.53418408236237 21 24.993989273164416 25.84920781702731 28.436132174341903 20.72067073546637 22 24.50619567227668 23.6275507058751 26.988625855372668 24.87762776647556 23 22.354586646939154 27.60195117440355 26.13679797792984 23.90666420072745 24 22.170257690647926 24.53925466987239 33.87190986992171 19.41857776955798 25 21.686779483385735 24.65839035817767 31.352567659207196 22.302262499229393 26 20.542352506010726 29.26638308365699 27.377550705875098 22.813713704457186 27 20.313097219653535 28.171814314777137 29.21583132975772 22.2992571358116 28 19.361938228222677 26.33430429689908 33.72287466863942 20.580882806238826 29 19.9894426977375 24.345909623327785 33.495777079095 22.168870599839714 30 21.85315331977067 26.223491153443067 31.55878182602799 20.364573700758275 31 27.19268232538068 25.214690832870968 26.67714690832871 20.915479933419643 32 28.02401208310215 25.645151347019297 25.88820048085815 20.442636089020404 33 26.78171814314777 25.77129954996609 26.34809814438074 21.098884162505392 34 22.248397139510512 26.19582639787929 28.68049133838851 22.87528512422169 35 21.694100240429073 26.007259108562973 29.90567782504161 22.39296282596634 36 27.63154244497873 25.656093952284074 26.11984464582948 20.592518956907714 37 22.722473953517046 29.192944331422233 27.38787682633623 20.696704888724494 38 22.894396153134824 29.752018987731955 24.858670858763332 22.494914000369892 39 22.01975833795697 29.05654706861476 26.013963380802664 22.90973121262561 40 24.09731212625609 25.38699833549103 26.831499291042476 23.684190247210406 41 20.547284384439923 24.768587016830036 27.364835706799827 27.319292891930214 42 22.828971703347513 26.225957092657666 25.555529868688737 25.389541335306088 43 22.846541520251527 25.944377658590717 27.023919610381604 24.185161210776155 44 22.29078046976142 27.179042599099933 28.432433265520007 22.097743665618644 45 20.8932094198878 30.259231859934655 25.467911965970043 23.37964675420751 46 22.688875531718146 28.605126071142344 27.376703039270083 21.32929535786943 47 22.411149127674 27.287466863941805 27.739273164416495 22.562110843967695 48 23.18052216262869 24.808196165464523 29.086138339189937 22.92514333271685 49 21.720069662782812 24.4424665556994 30.659561679304602 23.17790210221318 50 20.836569878552496 28.751232969607297 27.59385981135565 22.818337340484558 51 20.979671413599654 29.573392515874485 26.451821712594786 22.995114357931076 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 494.0 1 1046.0 2 1598.0 3 6971.0 4 12344.0 5 9039.5 6 5735.0 7 5781.5 8 5828.0 9 5890.0 10 5952.0 11 5943.0 12 5934.0 13 5835.5 14 5737.0 15 5491.5 16 5246.0 17 5195.0 18 5144.0 19 4881.5 20 4619.0 21 4929.5 22 5240.0 23 5759.0 24 6278.0 25 7003.5 26 9213.5 27 10698.0 28 12497.0 29 14296.0 30 16131.5 31 17967.0 32 21840.0 33 25713.0 34 30383.5 35 35054.0 36 36904.5 37 38755.0 38 44155.0 39 49555.0 40 59520.5 41 69486.0 42 81447.5 43 93409.0 44 95109.0 45 96809.0 46 95915.0 47 95021.0 48 93226.0 49 91431.0 50 94417.5 51 97404.0 52 94060.5 53 90717.0 54 82230.0 55 73743.0 56 69427.5 57 65112.0 58 63986.5 59 62861.0 60 58146.5 61 53432.0 62 48263.5 63 43095.0 64 37502.5 65 31910.0 66 27488.0 67 23066.0 68 19050.0 69 15034.0 70 12779.5 71 10525.0 72 8365.5 73 6206.0 74 5060.5 75 3100.0 76 2285.0 77 1705.5 78 1126.0 79 823.5 80 521.0 81 444.0 82 367.0 83 256.0 84 145.0 85 118.0 86 91.0 87 59.0 88 27.0 89 20.0 90 13.0 91 9.5 92 6.0 93 5.5 94 5.0 95 3.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1297680.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.266242089294405 #Duplication Level Percentage of deduplicated Percentage of total 1 78.98036209056237 17.585958626085922 2 5.583251958920835 2.4863607952571707 3 1.9425391997459636 1.2975914426846356 4 1.1483645921843855 1.0227905606540548 5 0.8444756842777654 0.9401650012325637 6 0.6399571101716158 0.8549663965107871 7 0.5285997663024152 0.8238951255383816 8 0.49881831849588876 0.8885447550563376 9 0.41979266445523855 0.8412484584663248 >10 7.458265387421373 42.363333445899606 >50 1.8603996975831008 26.990637554740836 >100 0.09308943798395651 2.9545996438959907 >500 0.0010420459475814032 0.1737089890631243 >1k 6.94697298387602E-4 0.2878650299612416 >5k 3.47348649193801E-4 0.4883341749530573 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6314 0.48656063128043897 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2156 0.1661426545835645 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1566 0.12067690031440725 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03390666420072745 0.0 2 0.0 0.0 0.0 0.1296929905677825 0.0 3 0.0 0.0 0.0 0.18402071388940264 0.0 4 0.0 0.0 0.0 0.2552247087109303 0.0 5 0.0 0.0 0.0 0.43469884717341717 0.0 6 0.0 0.0 0.0 0.621493742679243 0.0 7 0.0 0.0 0.0 0.7332316133407312 0.0 8 0.0 0.0 0.0 1.020128228839159 0.0 9 0.0 0.0 0.0 1.1519789162197152 0.0 10 0.0 0.0 0.0 1.3773041119536404 0.0 11 0.0 0.0 0.0 1.5986221564638432 0.0 12 0.0 0.0 0.0 1.7824887491523334 0.0 13 0.0 0.0 0.0 1.8628629554281486 0.0 14 0.0 0.0 0.0 1.8962301954256828 0.0 15 0.0 0.0 0.0 1.9485543431354417 0.0 16 0.0 0.0 0.0 2.072776031070834 0.0 17 0.0 0.0 0.0 2.2074779606682697 0.0 18 0.0 0.0 0.0 2.3935793107699896 0.0 19 0.0 0.0 0.0 2.4768047592626843 0.0 20 7.706060045619876E-5 0.0 0.0 2.5671968435978054 0.0 21 7.706060045619876E-5 0.0 0.0 2.6847142592935085 0.0 22 7.706060045619876E-5 0.0 0.0 2.80469761420381 0.0 23 7.706060045619876E-5 0.0 0.0 2.9529622094815364 0.0 24 7.706060045619876E-5 0.0 0.0 3.066318352752605 0.0 25 7.706060045619876E-5 0.0 0.0 3.1604864065100795 0.0 26 7.706060045619876E-5 0.0 0.0 3.2503390666420073 0.0 27 7.706060045619876E-5 0.0 0.0 3.346818938413168 0.0 28 7.706060045619876E-5 0.0 0.0 3.4435299919856974 0.0 29 7.706060045619876E-5 0.0 0.0 3.551568953825288 0.0 30 7.706060045619876E-5 0.0 0.0 3.679027186979841 0.0 31 7.706060045619876E-5 0.0 0.0 3.7967757844769126 0.0 32 7.706060045619876E-5 0.0 0.0 3.9021946859009926 0.0 33 7.706060045619876E-5 0.0 0.0 4.013701374761112 0.0 34 7.706060045619876E-5 0.0 0.0 4.131141729856359 0.0 35 7.706060045619876E-5 0.0 0.0 4.2727791134948525 0.0 36 7.706060045619876E-5 0.0 0.0 4.397848468035263 0.0 37 7.706060045619876E-5 0.0 0.0 4.523380186178411 0.0 38 7.706060045619876E-5 0.0 0.0 4.64421120769373 0.0 39 7.706060045619876E-5 0.0 0.0 4.803418408236237 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGGTAC 35 1.2120836E-7 45.000004 36 CCTCATA 25 3.8910854E-5 45.0 26 GCTAACG 55 1.8189894E-12 45.0 1 CGTTTTT 5105 0.0 42.708126 1 CTAACGG 75 0.0 42.0 2 CGTAAGG 165 0.0 40.90909 2 ATTTACG 40 3.458681E-7 39.375 1 CTAAGCG 40 3.458681E-7 39.375 1 CGGATAA 40 3.458681E-7 39.375 21 CGGTACG 40 3.458681E-7 39.375 34 TTTACGG 190 0.0 39.078945 2 ATGACGG 185 0.0 38.918922 2 ACGGGAA 405 0.0 38.888885 5 CGCTCGA 35 6.2489107E-6 38.57143 36 CGCGTAG 35 6.2489107E-6 38.57143 13 TACGGGA 450 0.0 38.5 4 TTGTACG 65 9.094947E-12 38.07692 1 GCGAGAC 270 0.0 37.5 21 TATTAGG 450 0.0 37.5 2 CACGACC 265 0.0 37.35849 27 >>END_MODULE