##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546311_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1126728 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.093885125780137 31.0 31.0 33.0 30.0 34.0 2 31.430679809146483 31.0 31.0 34.0 30.0 34.0 3 31.405752763754872 31.0 31.0 34.0 30.0 34.0 4 35.327545778573004 37.0 35.0 37.0 33.0 37.0 5 35.28006315632522 37.0 35.0 37.0 33.0 37.0 6 35.32508111984436 37.0 35.0 37.0 33.0 37.0 7 35.74591560696104 37.0 35.0 37.0 35.0 37.0 8 35.64390873396241 37.0 35.0 37.0 35.0 37.0 9 37.354792816012385 39.0 37.0 39.0 35.0 39.0 10 36.87418170135117 39.0 37.0 39.0 32.0 39.0 11 36.634663379271664 39.0 35.0 39.0 32.0 39.0 12 36.30523427127044 38.0 35.0 39.0 32.0 39.0 13 36.17975145731712 38.0 35.0 39.0 32.0 39.0 14 37.21895879040904 39.0 35.0 41.0 32.0 41.0 15 37.361910771721305 39.0 35.0 41.0 32.0 41.0 16 37.354618860985084 39.0 35.0 41.0 32.0 41.0 17 37.267142557919925 39.0 35.0 41.0 32.0 41.0 18 37.09890319580236 39.0 35.0 40.0 32.0 41.0 19 36.95692660517889 38.0 35.0 40.0 31.0 41.0 20 36.7418099133065 38.0 35.0 40.0 31.0 41.0 21 36.61830539402589 38.0 35.0 40.0 31.0 41.0 22 36.508356053989964 38.0 35.0 40.0 31.0 41.0 23 36.40797601550685 38.0 35.0 40.0 31.0 41.0 24 36.36231725846877 38.0 35.0 40.0 30.0 41.0 25 36.29327131304095 38.0 35.0 40.0 30.0 41.0 26 36.171556045469714 38.0 35.0 40.0 30.0 41.0 27 36.06819569585561 38.0 35.0 40.0 30.0 41.0 28 35.976600386251164 38.0 35.0 40.0 30.0 41.0 29 35.83789344012042 38.0 35.0 40.0 30.0 41.0 30 35.63148781249778 38.0 34.0 40.0 29.0 41.0 31 35.38845488884629 38.0 34.0 40.0 27.0 41.0 32 35.12313530861042 38.0 34.0 40.0 25.0 41.0 33 34.783294637215015 38.0 33.0 40.0 24.0 41.0 34 34.42153385732848 37.0 33.0 40.0 23.0 41.0 35 34.12300750491689 37.0 33.0 40.0 21.0 41.0 36 33.88334451615652 37.0 33.0 40.0 20.0 41.0 37 33.70927943567569 37.0 33.0 40.0 18.0 41.0 38 33.61785098089335 37.0 33.0 40.0 18.0 41.0 39 33.519972877216155 37.0 32.0 40.0 18.0 41.0 40 33.3434182872885 37.0 32.0 40.0 18.0 41.0 41 33.183779048714506 36.0 32.0 40.0 17.0 41.0 42 33.0225094255224 36.0 31.0 40.0 16.0 41.0 43 32.988588195198844 36.0 31.0 40.0 16.0 41.0 44 32.78895172570487 36.0 31.0 40.0 15.0 41.0 45 32.750110053180535 35.0 31.0 40.0 15.0 41.0 46 32.63312263474415 35.0 31.0 40.0 15.0 41.0 47 32.56022837810013 35.0 31.0 40.0 15.0 41.0 48 32.45625741083917 35.0 31.0 40.0 15.0 41.0 49 32.41845769342734 35.0 31.0 39.0 15.0 41.0 50 32.30279091315739 35.0 31.0 39.0 15.0 41.0 51 32.10793909443983 35.0 30.0 39.0 13.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 4.0 12 0.0 13 5.0 14 20.0 15 72.0 16 168.0 17 457.0 18 959.0 19 1858.0 20 3161.0 21 4972.0 22 7209.0 23 10347.0 24 14676.0 25 21510.0 26 27838.0 27 30487.0 28 30151.0 29 31231.0 30 34440.0 31 39036.0 32 46817.0 33 58294.0 34 85198.0 35 108590.0 36 91557.0 37 113985.0 38 156292.0 39 207371.0 40 22.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.22152995221562 22.848105310243465 26.42119482253037 18.509169915010542 2 35.15249465709559 23.66596019624967 28.110511143772055 13.071034002882683 3 27.876026867176463 23.952364723340505 34.95732776677246 13.214280642710573 4 24.26264369040265 26.820048849411748 34.40999069873119 14.507316761454407 5 21.7873346539715 30.642089306380953 33.26756768270603 14.303008356941515 6 20.113550031595913 38.818951867708975 30.889531457459118 10.177966643235989 7 82.09985018567036 4.093800810843433 11.734509127313778 2.0718398761724215 8 82.54787313353356 3.6284711128151605 11.654188056034819 2.169467697616461 9 77.05062801314958 5.670046364339929 13.57079969611122 3.708525926399273 10 38.153396383155474 29.87624342343494 19.444355691879494 12.526004501530094 11 30.454910146903245 23.847725449265482 28.88168218061502 16.815682223216253 12 28.204855120312978 21.94886432217891 33.3213517370652 16.52492882044291 13 22.578652523057915 28.31029316747254 31.80173032000625 17.309323989463294 14 18.946453802514892 30.308379662172236 32.254989669201436 18.49017686611143 15 17.444849156140613 23.577385136430443 40.78357864542285 18.194187062006094 16 19.75534467946124 21.262096974602564 37.50239631925363 21.48016202668257 17 20.268245752302242 21.652342002683877 32.18221256594316 25.897199679070727 18 22.73281572837455 22.666073799532807 34.42623241811688 20.17487805397576 19 25.218863825164544 25.589760794086946 28.978422476409566 20.212952904338934 20 28.110244886077208 22.71861531798269 29.197641311833912 19.97349848410619 21 24.187381515325793 24.713950483168965 30.036441803168113 21.06222619833713 22 23.503187992132972 23.329765480222378 29.254886716226096 23.91215981141855 23 21.207247889464007 25.756083100801614 29.431681825604763 23.604987184129623 24 21.29324912489971 23.15403540162311 35.72228612406899 19.8304293494082 25 21.004448278555248 26.215998892367992 31.797736454583536 20.981816374493224 26 21.137665878543892 26.86593392549045 29.943872877926168 22.05252731803949 27 20.20035004011616 25.976899482395044 31.37039285435349 22.452357623135306 28 19.64413771557998 25.10570430485441 33.787568960742966 21.462589018822644 29 19.916075574584106 23.065637846933775 33.7993730518812 23.218913526600918 30 21.580186167380237 25.272736632088666 32.938118161614874 20.208959038916223 31 24.129958605803708 26.147570664792212 29.46594031567512 20.256530413728957 32 24.458875611505174 25.339389808365464 28.422742667263083 21.77899191286628 33 23.81843710283227 27.33561249920123 27.979512357907144 20.866438040059357 34 20.91587321873602 25.7929154152555 30.24066145511605 23.050549910892425 35 21.407207418294387 26.81179486087148 30.099101114022197 21.681896606811936 36 24.03712342286692 28.137136913256793 26.886702025688543 20.939037638187745 37 21.380137885984904 29.28834643321192 28.4569124047685 20.87460327603468 38 21.471464275317555 28.242397455286454 28.72512265604476 21.561015613351227 39 21.230412308915728 29.584158732187362 27.11213354065933 22.07329541823759 40 23.23710780241549 26.241115868248592 28.260147968276282 22.261628361059635 41 20.751059705625494 26.270492967246756 28.396560660603093 24.581886666524664 42 22.064331409177726 27.562907818035942 26.32738336137914 24.04537741140719 43 21.88505122798049 26.44045412912433 28.385910352809198 23.288584290085986 44 21.715622581492607 27.055243146526937 28.689976640324904 22.539157631655556 45 20.697808166656017 29.60324053365142 26.78605661703623 22.91289468265633 46 21.771181687150758 28.425760254471356 28.32884245354691 21.474215604830977 47 21.36735751663223 28.286063717241426 28.503507501366787 21.84307126475955 48 21.704883521133763 25.364329279116166 29.264471993240605 23.666315206509466 49 21.117519046300437 25.669371844846317 30.14250111828232 23.070607990570927 50 20.44335456294687 27.96229436030701 29.49540616723823 22.098944909507885 51 20.173103002676775 27.6432288893149 29.139064618967485 23.04460348904083 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 535.0 1 850.5 2 1166.0 3 11219.5 4 21273.0 5 15279.0 6 9285.0 7 9268.0 8 9251.0 9 9387.0 10 9523.0 11 9571.0 12 9619.0 13 9339.0 14 9059.0 15 8738.0 16 8417.0 17 8027.0 18 7637.0 19 7374.5 20 7112.0 21 7074.5 22 7037.0 23 7112.0 24 7187.0 25 7597.0 26 9096.0 27 10185.0 28 11873.0 29 13561.0 30 15279.5 31 16998.0 32 20513.0 33 24028.0 34 28991.5 35 33955.0 36 37834.0 37 41713.0 38 44224.5 39 46736.0 40 51680.0 41 56624.0 42 62312.0 43 68000.0 44 69474.0 45 70948.0 46 74044.5 47 77141.0 48 77618.0 49 78095.0 50 77075.0 51 76055.0 52 72250.5 53 68446.0 54 63001.5 55 57557.0 56 56032.5 57 54508.0 58 51769.0 59 49030.0 60 46593.5 61 44157.0 62 40443.0 63 36729.0 64 32548.5 65 28368.0 66 24381.5 67 20395.0 68 17044.0 69 13693.0 70 11538.0 71 9383.0 72 7893.5 73 6404.0 74 5166.5 75 3124.0 76 2319.0 77 1853.0 78 1387.0 79 1030.5 80 674.0 81 496.5 82 319.0 83 234.0 84 149.0 85 103.5 86 58.0 87 43.0 88 28.0 89 22.5 90 17.0 91 14.5 92 12.0 93 10.5 94 9.0 95 9.0 96 9.0 97 4.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1126728.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.463066743981972 #Duplication Level Percentage of deduplicated Percentage of total 1 75.5497895134891 23.770280699566968 2 6.462280164329734 4.0664630425723445 3 2.9914618524844596 2.8236169178038355 4 1.9745977534803898 2.4850760364108146 5 1.4177749174424048 2.230377342771696 6 1.1317618994954577 2.136522010927284 7 0.9212188193195369 2.0289058438644 8 0.8306211825593615 2.090711176466434 9 0.6794630972306365 1.9240193500416207 >10 7.854723412833129 50.6246114453501 >50 0.16592170479935406 3.1737463454039494 >100 0.01897001013863966 1.1616395855222097 >500 5.662689591342828E-4 0.10306878835562112 >1k 5.662689591342828E-4 0.258429174606445 >5k 0.0 0.0 >10k+ 2.831344795671414E-4 1.1225322403363713 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12601 1.1183710709239496 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1777 0.15771330791459873 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.049435178676663756 0.0 2 0.0 0.0 0.0 0.1602871322981234 0.0 3 0.0 0.0 0.0 0.27859430137530977 0.0 4 0.0 0.0 0.0 0.372405762526537 0.0 5 0.0 0.0 0.0 0.6178066046108732 0.0 6 0.0 0.0 0.0 1.0278434546758402 0.0 7 0.0 0.0 0.0 1.2880659751066805 0.0 8 0.0 0.0 0.0 1.8110848403518862 0.0 9 0.0 0.0 0.0 2.116837426601629 0.0 10 0.0 0.0 0.0 2.50202355848084 0.0 11 0.0 0.0 0.0 2.771032582841644 0.0 12 0.0 0.0 0.0 3.0194510121342506 0.0 13 0.0 0.0 0.0 3.148142231310485 0.0 14 0.0 0.0 0.0 3.222250623043006 0.0 15 0.0 0.0 0.0 3.293696437827053 0.0 16 0.0 0.0 0.0 3.415642462067154 0.0 17 0.0 0.0 0.0 3.5593328647197904 0.0 18 0.0 0.0 0.0 3.7780191847544393 0.0 19 0.0 0.0 0.0 3.8798183767510883 0.0 20 0.0 0.0 0.0 3.9927116393663775 0.0 21 0.0 0.0 0.0 4.106847437890955 0.0 22 0.0 0.0 0.0 4.240775058399188 0.0 23 0.0 0.0 0.0 4.397867098359143 0.0 24 0.0 0.0 0.0 4.518304328995108 0.0 25 0.0 0.0 0.0 4.630487571090804 0.0 26 8.875256494912702E-5 0.0 0.0 4.724121527112134 0.0 27 8.875256494912702E-5 0.0 0.0 4.848286365475962 0.0 28 8.875256494912702E-5 0.0 0.0 4.955854474194304 0.0 29 8.875256494912702E-5 0.0 0.0 5.084811951065386 0.0 30 8.875256494912702E-5 0.0 0.0 5.267287224600791 0.0 31 8.875256494912702E-5 0.0 0.0 5.39961729893994 0.0 32 8.875256494912702E-5 0.0 0.0 5.539935104124509 0.0 33 8.875256494912702E-5 0.0 0.0 5.671200147684268 0.0 34 8.875256494912702E-5 0.0 0.0 5.805926541277043 0.0 35 8.875256494912702E-5 0.0 0.0 5.969586271043233 0.0 36 8.875256494912702E-5 0.0 0.0 6.100851314602992 0.0 37 8.875256494912702E-5 0.0 0.0 6.238684047968986 0.0 38 8.875256494912702E-5 0.0 0.0 6.3853032852649445 0.0 39 8.875256494912702E-5 0.0 0.0 6.547809231686796 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGGTA 90 0.0 45.000004 5 CGTTTTT 9090 0.0 43.861385 1 CGTTCGA 60 3.6379788E-12 41.249996 14 ACGTAGG 165 0.0 40.90909 2 TCGTTAG 50 1.0822987E-9 40.5 1 CGGTCTA 100 0.0 40.5 31 ATACTAT 2165 0.0 39.699768 45 AGGGCGA 1185 0.0 39.683544 6 GTATGCG 75 0.0 39.0 1 TATGGGA 1150 0.0 38.934784 4 CGTAAGG 125 0.0 37.800003 2 GTTTTTT 10905 0.0 37.71665 2 TATACTA 2290 0.0 37.532753 44 TCGACTA 30 1.1399076E-4 37.499996 23 TAGGGAT 1285 0.0 37.470814 5 TAGGGAC 1390 0.0 37.392086 5 ATGGGAC 880 0.0 37.329544 5 ATTATAC 2355 0.0 37.261147 42 GTAGGGA 1385 0.0 37.039715 4 TTACGGG 395 0.0 37.025314 3 >>END_MODULE