##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546292_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1582554 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.18728776395624 31.0 31.0 33.0 30.0 34.0 2 31.427423013685473 31.0 31.0 34.0 30.0 34.0 3 31.521965127256323 31.0 31.0 34.0 30.0 34.0 4 35.30240295117892 37.0 35.0 37.0 33.0 37.0 5 35.006639899807524 37.0 35.0 37.0 32.0 37.0 6 35.15738736245335 37.0 35.0 37.0 32.0 37.0 7 35.677846064020564 37.0 35.0 37.0 35.0 37.0 8 35.74032039349052 37.0 35.0 37.0 35.0 37.0 9 37.44813826258061 39.0 37.0 39.0 35.0 39.0 10 36.74072985819125 39.0 37.0 39.0 32.0 39.0 11 36.46933311596318 39.0 35.0 39.0 32.0 39.0 12 35.640159514304095 37.0 35.0 39.0 31.0 39.0 13 35.19005670580593 37.0 35.0 39.0 30.0 39.0 14 36.155565623669084 38.0 35.0 40.0 30.0 41.0 15 36.41166999672681 38.0 35.0 40.0 31.0 41.0 16 36.565155438613786 38.0 35.0 40.0 31.0 41.0 17 36.47735938236547 38.0 35.0 40.0 31.0 41.0 18 36.46169040677285 38.0 35.0 40.0 31.0 41.0 19 36.40304469863272 38.0 35.0 40.0 31.0 41.0 20 36.299751540863696 38.0 35.0 40.0 31.0 41.0 21 36.171227648472026 38.0 34.0 40.0 30.0 41.0 22 36.05632098493953 37.0 34.0 40.0 30.0 41.0 23 35.992996131569605 37.0 34.0 40.0 30.0 41.0 24 35.91063875229534 37.0 34.0 40.0 30.0 41.0 25 35.7917638197496 37.0 34.0 40.0 30.0 41.0 26 35.72473672304389 37.0 34.0 40.0 30.0 41.0 27 35.64739718202349 37.0 34.0 40.0 29.0 41.0 28 35.624424822154566 37.0 34.0 40.0 29.0 41.0 29 35.65958254821005 37.0 34.0 40.0 29.0 41.0 30 35.58365464938321 37.0 34.0 40.0 29.0 41.0 31 35.496240254676934 37.0 34.0 40.0 29.0 41.0 32 35.30856008704916 37.0 34.0 40.0 29.0 41.0 33 35.15378495773288 37.0 34.0 40.0 27.0 41.0 34 35.01906538418278 36.0 34.0 40.0 27.0 41.0 35 34.87355881695032 36.0 34.0 40.0 26.0 41.0 36 34.715798639414515 36.0 33.0 40.0 25.0 41.0 37 34.62044138778203 36.0 33.0 40.0 25.0 41.0 38 34.63022936342141 36.0 33.0 40.0 25.0 41.0 39 34.5221313143185 36.0 33.0 40.0 25.0 41.0 40 34.390647649306125 36.0 33.0 40.0 24.0 41.0 41 34.339326809701284 36.0 33.0 40.0 24.0 41.0 42 34.279025549839055 36.0 33.0 40.0 24.0 41.0 43 34.25382640971493 35.0 33.0 40.0 24.0 41.0 44 34.04814812006415 35.0 33.0 40.0 23.0 41.0 45 34.058318389135536 35.0 33.0 40.0 23.0 41.0 46 33.98584187332628 35.0 33.0 40.0 23.0 41.0 47 33.923236742632476 35.0 33.0 40.0 23.0 41.0 48 33.85185655592163 35.0 33.0 39.0 23.0 41.0 49 33.75809735402394 35.0 33.0 39.0 24.0 41.0 50 33.69512635903735 35.0 33.0 39.0 24.0 41.0 51 33.61511076399289 35.0 32.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 5.0 13 9.0 14 15.0 15 56.0 16 171.0 17 421.0 18 981.0 19 1908.0 20 3240.0 21 5267.0 22 7973.0 23 11628.0 24 15861.0 25 20842.0 26 26177.0 27 30559.0 28 35017.0 29 40185.0 30 48044.0 31 59289.0 32 73168.0 33 93838.0 34 154900.0 35 212494.0 36 115632.0 37 142658.0 38 196868.0 39 285178.0 40 167.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.41431256058245 24.53988931815281 29.7654929942359 13.280305127028841 2 29.414730871742766 27.433060736000165 29.966497193776643 13.185711198480432 3 29.16197488363746 26.057309892742996 31.273940731248352 13.506774492371193 4 26.929128484715214 27.21101460044965 30.715981887505894 15.14387502732924 5 23.618467363514924 32.816510526655016 29.47330707198617 14.09171503784389 6 22.214976550563204 41.848998517586125 25.90439251993929 10.031632411911378 7 85.56125099048752 5.572321702766541 6.858470548240376 2.007956758505555 8 87.16012218224465 5.123553445885575 5.750388296386727 1.9659360754830484 9 82.32211981392105 6.528750361757007 7.4037915925775675 3.745338231744383 10 49.303088551796655 25.155286960192196 13.59694519112776 11.944679296883393 11 44.497944461926735 22.08240603480197 19.431122097571393 13.9885274056999 12 39.33369730195621 21.86364572709683 22.92086083634429 15.881796134602673 13 23.348081645239276 37.25136709395066 23.51452146340662 15.886029797403436 14 16.812759627791532 40.236225746483214 26.69444454975944 16.25657007596581 15 16.922139781644102 23.955391095659294 42.77225295313777 16.350216169558827 16 18.51260683679672 19.302090165643637 41.536971250270135 20.648331747289507 17 17.9717722112484 21.253303204819552 27.9758542204563 32.79907036347575 18 22.06269106772976 23.79369045226893 32.511370860014885 21.632247619986426 19 29.146746335354116 24.688762595146834 24.122146858811767 22.042344210687283 20 30.72874606490521 24.00398343437254 24.946826459002345 20.320444041719902 21 23.457335421097795 28.21186512434963 26.886475911722446 21.444323542830134 22 23.591675228775763 24.842943747891066 25.562666424020918 26.00271459931225 23 21.62390667237895 29.639304567174328 24.673976369842674 24.062812390604048 24 21.362746547669147 24.899940223208812 35.17011109889457 18.567202130227468 25 19.71957986899657 26.512017915344437 31.987850019651777 21.780552196007214 26 18.130882105760687 32.738788060312636 26.790491825239453 22.339838008687224 27 20.62798489024703 31.715379064474263 27.4850020915558 20.171633953722907 28 17.20491054333691 29.84631172143257 34.208690509139025 18.740087226091497 29 17.95730193092937 25.668950317019195 34.42542876893932 21.94831898311211 30 19.716799553127412 30.21950593787005 29.490178534192196 20.573515974810338 31 28.115185958899346 26.838262706991355 24.35878965267536 20.687761681433937 32 29.202036707752153 26.78524713848627 25.582444580090158 18.43027157367142 33 27.695611018644545 27.529234389474226 24.454773739158348 20.320380852722877 34 20.52618741603762 28.19827948998897 27.137020284931822 24.138512809041586 35 21.990213288140563 25.55388315343426 29.010384479771307 23.445519078653874 36 28.123147772524664 26.78303552359035 25.118384585928823 19.975432117956167 37 21.562613345263415 31.598226663987454 27.49119461326438 19.347965377484748 38 21.672246255104092 31.587990046469187 23.799882973977507 22.939880724449214 39 21.813220907469823 30.42297450829482 26.553406708396682 21.210397875838677 40 22.976909476706638 26.53982107403602 25.81959288592996 24.663676563327382 41 18.660469089838326 25.310226380900748 27.070292704072024 28.959011825188902 42 21.350235126257935 27.304850261033746 24.5216276980122 26.823286914696116 43 22.444858121744975 27.132217921157824 25.559443785172576 24.863480171924625 44 20.865070007089805 29.040462442355835 27.139611033809906 22.954856516744453 45 18.665966532579613 34.50251934531144 23.62301697130082 23.208497150808125 46 22.17377732450204 31.755188132600846 25.854978724264697 20.216055818632412 47 22.47127112250198 27.935602829350533 26.859304643001124 22.733821405146365 48 22.851352939615328 25.580612099176392 28.90681771364516 22.66121724756312 49 21.562297400278286 25.322105912341698 30.010603113701016 23.104993573679003 50 20.526882495004912 31.20354818856102 26.421088948623556 21.848480367810513 51 19.800904108169455 32.30777591159607 24.521690887009225 23.369629093225257 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 882.0 1 1571.0 2 2260.0 3 5218.5 4 8177.0 5 6372.0 6 4567.0 7 4739.0 8 4911.0 9 5164.5 10 5418.0 11 5531.5 12 5645.0 13 5583.5 14 5522.0 15 5345.0 16 5168.0 17 5129.0 18 5090.0 19 5122.0 20 5154.0 21 5747.5 22 6341.0 23 6950.0 24 7559.0 25 8512.0 26 12393.0 27 15321.0 28 17553.5 29 19786.0 30 22643.5 31 25501.0 32 30343.0 33 35185.0 34 39803.5 35 44422.0 36 45609.5 37 46797.0 38 55578.5 39 64360.0 40 85102.0 41 105844.0 42 122776.5 43 139709.0 44 140934.5 45 142160.0 46 140225.5 47 138291.0 48 129912.5 49 121534.0 50 113803.0 51 106072.0 52 99950.0 53 93828.0 54 86160.5 55 78493.0 56 74919.0 57 71345.0 58 67644.0 59 63943.0 60 61212.5 61 58482.0 62 50729.0 63 42976.0 64 37347.0 65 31718.0 66 26860.0 67 22002.0 68 18210.5 69 14419.0 70 11903.0 71 9387.0 72 8116.0 73 6845.0 74 5358.5 75 2960.0 76 2048.0 77 1500.5 78 953.0 79 786.0 80 619.0 81 475.0 82 331.0 83 203.5 84 76.0 85 70.5 86 65.0 87 33.0 88 1.0 89 4.0 90 7.0 91 4.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1582554.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.1987282233017 #Duplication Level Percentage of deduplicated Percentage of total 1 80.08956545220337 14.575282351869824 2 6.632879984664582 2.414199603573765 3 2.2352988607970037 1.2203878939650168 4 1.1856864930188364 0.8631194497795804 5 0.6991555275325823 0.6361870715692296 6 0.5098480203246261 0.5567151334245762 7 0.37529496625454695 0.4780923766107778 8 0.3228451374086535 0.4700296731131662 9 0.2620337452652218 0.4291812823874075 >10 4.30086289194472 20.248075906025743 >50 2.3188409197470303 30.704328676868688 >100 1.0617016235255132 25.903915027550457 >500 0.0035213984196534108 0.3706674827054881 >1k 0.0024649788937573876 1.12981807055632 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4482 0.28321308467199224 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4147 0.2620447706681731 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2224 0.14053232938654858 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2006 0.12675712803480954 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1943 0.12277622122215102 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.029446072614267824 0.0 2 0.0 0.0 0.0 0.09819570137891029 0.0 3 0.0 0.0 0.0 0.14615615012189156 0.0 4 0.0 0.0 0.0 0.23639003787548482 0.0 5 0.0 0.0 0.0 0.4058629279000906 0.0 6 0.0 0.0 0.0 0.5477222262241921 0.0 7 0.0 0.0 0.0 0.6395358389034435 0.0 8 0.0 0.0 0.0 0.8421829523668702 0.0 9 0.0 0.0 0.0 0.9121963610720393 0.0 10 0.0 0.0 0.0 1.0708639326051432 0.0 11 0.0 0.0 0.0 1.2223279584772462 0.0 12 0.0 0.0 0.0 1.3771410011917444 0.0 13 0.0 0.0 0.0 1.4367282253875697 0.0 14 0.0 0.0 0.0 1.459097130334889 0.0 15 0.0 0.0 0.0 1.4987798204674216 0.0 16 0.0 0.0 0.0 1.5783347677235657 0.0 17 0.0 0.0 0.0 1.6700220024087646 0.0 18 0.0 0.0 0.0 1.7928614126279419 0.0 19 0.0 0.0 0.0 1.856303165642373 0.0 20 0.0 0.0 0.0 1.919934485647883 0.0 21 0.0 0.0 0.0 1.99961581089808 0.0 22 0.0 0.0 0.0 2.083404420954988 0.0 23 0.0 0.0 0.0 2.1789461844587925 0.0 24 0.0 0.0 0.0 2.2572373517744104 0.0 25 0.0 0.0 0.0 2.324533633607447 0.0 26 0.0 0.0 0.0 2.3909452694821156 0.0 27 0.0 0.0 0.0 2.459252575267574 0.0 28 0.0 0.0 0.0 2.528886849990585 0.0 29 6.31889970263258E-5 0.0 0.0 2.5978892347433327 0.0 30 6.31889970263258E-5 0.0 0.0 2.6896396584255577 0.0 31 6.31889970263258E-5 0.0 0.0 2.7772827973010714 0.0 32 6.31889970263258E-5 0.0 0.0 2.8637253452330853 0.0 33 6.31889970263258E-5 0.0 0.0 2.9467556873256773 0.0 34 6.31889970263258E-5 0.0 0.0 3.034146070213086 0.0 35 6.31889970263258E-5 0.0 0.0 3.143399846071603 0.0 36 6.31889970263258E-5 0.0 0.0 3.2396366885426975 0.0 37 6.31889970263258E-5 0.0 0.0 3.339096169862134 0.0 38 6.31889970263258E-5 0.0 0.0 3.4357753353124125 0.0 39 6.31889970263258E-5 0.0 0.0 3.5303692638608224 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCGG 20 7.0340926E-4 45.000004 41 GCACGAT 20 7.0340926E-4 45.000004 40 TATGCGA 20 7.0340926E-4 45.000004 41 TACGACT 35 1.21232E-7 45.000004 13 CGTAAAC 20 7.0340926E-4 45.000004 40 ACGTATG 20 7.0340926E-4 45.000004 11 ACGTAAG 30 2.1660217E-6 45.000004 1 ACGTAAC 20 7.0340926E-4 45.000004 19 ATACGCG 30 2.1660217E-6 45.000004 1 ATCGCAC 20 7.0340926E-4 45.000004 27 TACACGA 25 3.8914754E-5 45.0 45 CCGCACA 25 3.8914754E-5 45.0 42 CGGACGT 25 3.8914754E-5 45.0 36 CGACGGT 185 0.0 43.783783 28 CGGTCTA 185 0.0 43.783783 31 TTACGAG 100 0.0 42.75 1 GCTACGA 245 0.0 41.32653 10 ATACCGG 60 3.6379788E-12 41.250004 2 CGCACGG 55 6.184564E-11 40.909092 2 CGTTTTT 3670 0.0 40.52452 1 >>END_MODULE