SRR1546277_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1546277_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2763236
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	10798	0.39077371603438865	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6313	0.22846401827422633	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCTTACG	25	3.892232E-5	45.000004	26
CACGCTA	25	3.892232E-5	45.000004	17
ATCGTCC	30	2.1666128E-6	45.000004	35
CCGTACT	30	2.1666128E-6	45.000004	25
CACTCCG	25	3.892232E-5	45.000004	43
TGCGCCC	25	3.892232E-5	45.000004	14
TACGATG	25	3.892232E-5	45.000004	1
CGCTAAC	25	3.892232E-5	45.000004	19
TCGAGTA	30	2.1666128E-6	45.000004	20
ACGAACT	25	3.892232E-5	45.000004	18
ACGCGCT	25	3.892232E-5	45.000004	27
GTCGACC	20	7.03501E-4	45.0	39
CGCGACA	20	7.03501E-4	45.0	42
TCTACGA	35	1.2127566E-7	45.0	23
AACGCGT	40	6.8212103E-9	45.0	14
CGTCGGA	40	6.8212103E-9	45.0	15
TTCGGAC	20	7.03501E-4	45.0	14
CCAACGT	45	3.8562575E-10	45.0	45
CGACTCG	20	7.03501E-4	45.0	38
CGTCCTA	20	7.03501E-4	45.0	11