##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546272_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 950472 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.918478398101154 31.0 31.0 34.0 31.0 34.0 2 32.24209761045039 33.0 31.0 34.0 31.0 34.0 3 32.320232473970826 34.0 31.0 34.0 31.0 34.0 4 36.01792688264357 37.0 35.0 37.0 35.0 37.0 5 35.821306677103586 37.0 35.0 37.0 35.0 37.0 6 35.977900453669335 37.0 35.0 37.0 35.0 37.0 7 36.1352538528226 37.0 35.0 37.0 35.0 37.0 8 36.13764529623177 37.0 35.0 37.0 35.0 37.0 9 37.873252447205175 39.0 38.0 39.0 35.0 39.0 10 37.590672844649816 39.0 37.0 39.0 35.0 39.0 11 37.39766137245495 39.0 37.0 39.0 35.0 39.0 12 36.65877900664091 39.0 35.0 39.0 33.0 39.0 13 36.32225462717471 38.0 35.0 39.0 33.0 39.0 14 37.44979231371361 40.0 35.0 41.0 33.0 41.0 15 37.58042635658915 39.0 35.0 41.0 33.0 41.0 16 37.69715783316079 39.0 35.0 41.0 34.0 41.0 17 37.63256255839204 39.0 35.0 41.0 34.0 41.0 18 37.645572936393705 39.0 35.0 41.0 34.0 41.0 19 37.55613631963909 39.0 35.0 41.0 34.0 41.0 20 37.42827037513993 39.0 35.0 41.0 34.0 41.0 21 37.347839810115396 39.0 35.0 41.0 33.0 41.0 22 37.26639080372699 39.0 35.0 41.0 33.0 41.0 23 37.15151103872602 39.0 35.0 41.0 33.0 41.0 24 37.096818212424985 38.0 35.0 41.0 33.0 41.0 25 36.99600619481689 38.0 35.0 41.0 33.0 41.0 26 36.98788075819172 38.0 35.0 41.0 33.0 41.0 27 36.927782196634936 38.0 35.0 41.0 33.0 41.0 28 36.92168101743134 38.0 35.0 41.0 33.0 41.0 29 36.9273245292865 38.0 35.0 41.0 33.0 41.0 30 36.87893067865229 38.0 35.0 41.0 33.0 41.0 31 36.74000496595376 38.0 35.0 41.0 33.0 41.0 32 36.51436865052311 38.0 35.0 41.0 32.0 41.0 33 36.31769794375847 38.0 35.0 41.0 31.0 41.0 34 36.12988914981188 38.0 35.0 41.0 31.0 41.0 35 35.94905057697649 38.0 35.0 41.0 31.0 41.0 36 35.8318519640768 38.0 35.0 40.0 30.0 41.0 37 35.73677288757586 38.0 35.0 40.0 30.0 41.0 38 35.67005130082738 38.0 35.0 40.0 30.0 41.0 39 35.62146281005648 38.0 35.0 40.0 30.0 41.0 40 35.46212828994437 37.0 35.0 40.0 29.0 41.0 41 35.436444208772066 37.0 35.0 40.0 29.0 41.0 42 35.36510386418537 37.0 35.0 40.0 29.0 41.0 43 35.3132727739481 37.0 35.0 40.0 29.0 41.0 44 35.04072608135747 36.0 34.0 40.0 28.0 41.0 45 35.07837158801101 36.0 34.0 40.0 28.0 41.0 46 35.03246597479989 36.0 34.0 40.0 28.0 41.0 47 34.96955828262168 36.0 34.0 40.0 28.0 41.0 48 34.91545253305726 36.0 34.0 40.0 28.0 41.0 49 34.845797666843424 36.0 34.0 40.0 28.0 41.0 50 34.74523605114091 35.0 34.0 40.0 28.0 41.0 51 34.68899978116136 35.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 4.0 14 6.0 15 16.0 16 39.0 17 102.0 18 247.0 19 479.0 20 891.0 21 1682.0 22 2950.0 23 4694.0 24 6762.0 25 8954.0 26 11212.0 27 12391.0 28 12448.0 29 13215.0 30 15391.0 31 19309.0 32 25874.0 33 38455.0 34 85420.0 35 152132.0 36 61906.0 37 85332.0 38 139627.0 39 250757.0 40 174.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.352586925232934 24.471946569704315 28.65386881465209 13.521597690410658 2 30.720000168337414 27.511489028608942 29.149622503345707 12.618888299707933 3 29.6501106818507 25.97235899637233 31.117486890723768 13.260043431053203 4 26.873069380265807 27.284128306778104 31.002807026403723 14.839995286552366 5 24.564216515583837 32.50458719457281 28.804530801538604 14.126665488304758 6 22.017481840601302 40.91924854177714 26.2914636096592 10.771806007962361 7 84.96694274002812 5.219617200717117 7.87619203932362 1.93724801993115 8 86.34783560168002 5.391216153658393 6.175668509961366 2.0852797347002334 9 81.01038221010192 6.9931570840592885 7.934478869445917 4.061981836392866 10 50.48428570226161 25.135932463028894 13.132317417030695 11.247464417678795 11 45.399548855726415 21.379693457566347 19.743769411408227 13.476988275299009 12 39.32393589711217 21.829469989647247 23.85477952007003 14.991814593170552 13 23.35744766810595 37.24044474745179 23.87098199631341 15.531125588128846 14 16.49043843479871 40.84360191567979 26.786270400390542 15.879689249130957 15 15.70893198326726 22.988893939011355 45.031942024594095 16.270232053127287 16 17.538864900807177 19.452650893450834 42.72856012591639 20.279924079825605 17 17.67069413933288 20.46972451581951 28.67722563105489 33.182355713792724 18 22.137737881810303 23.441932008517874 32.17369896219983 22.246631147471994 19 29.439057647147944 23.70306542433654 25.644311457886186 21.213565470629327 20 32.32972670420591 22.70629750271444 24.123277697817507 20.840698095262145 21 23.631837655396478 28.039647669789325 27.15997946283531 21.168535211978888 22 23.332828321086787 25.04029576883906 25.680609213106752 25.946266696967403 23 21.74267100977199 28.95361462515466 25.035771700797078 24.267942664276276 24 21.09678138861534 24.932244190254945 35.443232415052734 18.52774200607698 25 19.12081576311559 26.775959733690208 32.75761937226977 21.345605130924426 26 18.45525170652055 33.00644311457886 27.434159028356436 21.10414615054415 27 21.098464762770497 32.05586277133887 27.526113341581866 19.319559124308764 28 16.78208300717959 29.990047050307638 34.849211760051844 18.378658182460924 29 17.88237843934382 25.184960735297828 35.36011581614187 21.572545009216473 30 19.789430935366852 30.449818616434783 29.14088999991583 20.619860448282537 31 28.6417695629119 26.49357371916269 24.374942134013416 20.489714583911994 32 30.422884629952275 26.514405474332754 25.898606166199528 17.16410372951544 33 28.734355141445512 27.79166561455782 23.585755287899065 19.888223956097605 34 21.11666624582313 27.984938009746735 27.005003829676205 23.893391914753934 35 22.991524211128787 25.52805343029568 28.87323350924593 22.607188849329596 36 28.51109764411787 27.85689636307014 24.80493901977123 18.82706697304076 37 21.579383716721797 32.52247304497134 26.72503766549672 19.17310557281014 38 22.346476277049717 32.13340319336077 22.449372522283664 23.070748007305845 39 22.451371529092913 30.71831679418226 24.915094816049287 21.91521686067554 40 24.043843479871054 26.61572355629624 24.777163346211147 24.56326961762156 41 18.44715046839886 26.692211869471166 26.174153473221722 28.686484188908246 42 22.5061864000202 27.609861205800907 23.5263111380451 26.357641256133796 43 23.40026849817775 26.364164330985023 25.06912355124612 25.166443619591107 44 20.6252262034021 29.752165240007074 27.95179658106709 21.67081197552374 45 18.822227272344687 35.25963942125597 23.621000934272658 22.29713237212669 46 21.90311760893535 32.40326911260931 25.529947226220234 20.1636660522351 47 23.077271082157075 28.220399969699265 26.15837184051713 22.54395710762653 48 22.906724238062772 25.85094563543166 29.009692026698314 22.232638099807254 49 22.26146588221431 25.07985506148524 30.310729826864968 22.34794922943548 50 20.29286501864337 32.259130200574035 26.068311323216253 21.379693457566347 51 20.769996380745567 32.22988157462818 24.233959548519053 22.7661624961072 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1002.0 1 1449.0 2 1896.0 3 4651.5 4 7407.0 5 5493.5 6 3580.0 7 3741.5 8 3903.0 9 4198.5 10 4494.0 11 4650.0 12 4806.0 13 4566.0 14 4326.0 15 4171.5 16 4017.0 17 4074.0 18 4131.0 19 3995.5 20 3860.0 21 4029.5 22 4199.0 23 4341.0 24 4483.0 25 5160.0 26 7310.0 27 8783.0 28 10678.5 29 12574.0 30 13348.5 31 14123.0 32 15876.5 33 17630.0 34 19601.0 35 21572.0 36 23789.0 37 26006.0 38 31891.5 39 37777.0 40 48293.0 41 58809.0 42 68345.0 43 77881.0 44 80619.5 45 83358.0 46 82127.0 47 80896.0 48 76685.0 49 72474.0 50 66527.0 51 60580.0 52 59708.5 53 58837.0 54 55071.0 55 51305.0 56 48186.0 57 45067.0 58 44655.5 59 44244.0 60 40374.5 61 36505.0 62 32007.5 63 27510.0 64 23339.0 65 19168.0 66 15964.5 67 12761.0 68 10427.5 69 8094.0 70 7259.5 71 6425.0 72 5599.0 73 4773.0 74 3670.5 75 2020.5 76 1473.0 77 1059.5 78 646.0 79 542.0 80 438.0 81 280.0 82 122.0 83 109.0 84 96.0 85 55.0 86 14.0 87 15.5 88 17.0 89 10.5 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 950472.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.297301196175553 #Duplication Level Percentage of deduplicated Percentage of total 1 78.44623732215743 14.353544319901825 2 5.44885714881865 1.9939876085373838 3 1.985394747151951 1.0898209704583217 4 1.1705050010856854 0.8566833022597833 5 0.794831239492426 0.727163329456123 6 0.6479763753237714 0.7113731344383084 7 0.5250602817357191 0.672503028474707 8 0.46611543395150323 0.6822923589757381 9 0.41673850652347566 0.6862670976513964 >10 7.074866571232441 33.22912823409027 >50 2.5612241271781127 32.56571599723144 >100 0.45638679754296 10.75012959281967 >500 0.003483868683534046 0.5162314541830387 >1k 0.0023225791223560307 1.1651595715219973 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3989 0.41968621905747877 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3692 0.3884385863023845 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2093 0.2202063816714222 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1193 0.12551658544386368 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAACGCGATCGTATGCCG 1000 0.10521088469728725 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.017465006859749683 0.0 2 0.0 0.0 0.0 0.0669141226674747 0.0 3 0.0 0.0 0.0 0.10184413638697405 0.0 4 0.0 0.0 0.0 0.1773855515996263 0.0 5 0.0 0.0 0.0 0.3202619330185424 0.0 6 0.0 0.0 0.0 0.43083857283539123 0.0 7 0.0 0.0 0.0 0.5042757703540978 0.0 8 0.0 0.0 0.0 0.6558846552028886 0.0 9 0.0 0.0 0.0 0.7191163969059583 0.0 10 0.0 0.0 0.0 0.9394279894620778 0.0 11 0.0 0.0 0.0 1.082725214419783 0.0 12 0.0 0.0 0.0 1.2542189564763613 0.0 13 0.0 0.0 0.0 1.3062983444015184 0.0 14 0.0 0.0 0.0 1.3286030519573433 0.0 15 0.0 0.0 0.0 1.3706874058362581 0.0 16 0.0 0.0 0.0 1.444650657778451 0.0 17 0.0 0.0 0.0 1.517877433527763 0.0 18 0.0 0.0 0.0 1.624456059726115 0.0 19 0.0 0.0 0.0 1.695157774242692 0.0 20 0.0 0.0 0.0 1.7541810805578701 0.0 21 0.0 0.0 0.0 1.8213056249947395 0.0 22 0.0 0.0 0.0 1.896636618437997 0.0 23 0.0 0.0 0.0 1.9727040880741358 0.0 24 0.0 0.0 0.0 2.029202333156579 0.0 25 0.0 0.0 0.0 2.082754673467498 0.0 26 0.0 0.0 0.0 2.133571530776288 0.0 27 0.0 0.0 0.0 2.1885968234729694 0.0 28 0.0 0.0 0.0 2.243727327054348 0.0 29 0.0 0.0 0.0 2.2992786741745155 0.0 30 0.0 0.0 0.0 2.375030511156562 0.0 31 0.0 0.0 0.0 2.448678130444663 0.0 32 0.0 0.0 0.0 2.517801681690781 0.0 33 0.0 0.0 0.0 2.5858731240899258 0.0 34 0.0 0.0 0.0 2.6563644168371083 0.0 35 0.0 0.0 0.0 2.7549470157984666 0.0 36 0.0 0.0 0.0 2.835643764361286 0.0 37 0.0 0.0 0.0 2.9154988258465266 0.0 38 0.0 0.0 0.0 2.9908298192897846 0.0 39 0.0 0.0 0.0 3.0721578331607873 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATATCG 20 7.032669E-4 45.000004 25 CCCCGTA 20 7.032669E-4 45.000004 40 ATTCACG 20 7.032669E-4 45.000004 1 AAGCACG 20 7.032669E-4 45.000004 1 CTACCGT 20 7.032669E-4 45.000004 37 CGTAATC 20 7.032669E-4 45.000004 33 ACCGTAT 20 7.032669E-4 45.000004 41 TATCGCG 20 7.032669E-4 45.000004 1 TAGCCGT 35 1.2116288E-7 45.0 44 GTATGCG 25 3.8902952E-5 45.0 1 TATTCCG 25 3.8902952E-5 45.0 1 CGACAAA 30 2.165105E-6 44.999996 12 TAGTTCG 30 2.165105E-6 44.999996 1 CCGATCG 220 0.0 43.977272 40 ATAACGG 70 0.0 41.785713 2 AGGGCGT 70 0.0 41.785713 6 CGATCGA 210 0.0 41.785713 41 CGATGAA 930 0.0 41.612904 19 CGGTCTA 125 0.0 41.399998 31 TTCACGG 60 3.6379788E-12 41.249996 2 >>END_MODULE