##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546270_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1356268 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.1494881542586 31.0 31.0 33.0 30.0 34.0 2 31.384236743770405 31.0 31.0 34.0 30.0 34.0 3 31.484315784196045 31.0 31.0 34.0 30.0 34.0 4 35.254084738414534 37.0 35.0 37.0 33.0 37.0 5 34.97561912542359 37.0 35.0 37.0 32.0 37.0 6 35.10818289600581 37.0 35.0 37.0 32.0 37.0 7 35.65220959279434 37.0 35.0 37.0 35.0 37.0 8 35.71713997528512 37.0 35.0 37.0 35.0 37.0 9 37.4519269053019 39.0 37.0 39.0 35.0 39.0 10 36.77268946845314 39.0 37.0 39.0 32.0 39.0 11 36.43216163767043 38.0 35.0 39.0 32.0 39.0 12 35.387256058537105 37.0 35.0 39.0 30.0 39.0 13 34.77118017972849 37.0 33.0 39.0 27.0 39.0 14 35.684793860800376 37.0 34.0 40.0 27.0 41.0 15 36.05061683973964 37.0 34.0 40.0 30.0 41.0 16 36.26082898070293 37.0 35.0 40.0 31.0 41.0 17 36.22074103348306 37.0 35.0 40.0 31.0 41.0 18 36.19938094830815 37.0 35.0 40.0 31.0 41.0 19 36.12858889246078 37.0 35.0 40.0 31.0 41.0 20 36.030432038505666 36.0 34.0 40.0 30.0 41.0 21 35.8580944179174 36.0 34.0 40.0 30.0 41.0 22 35.74796058006235 36.0 34.0 40.0 30.0 41.0 23 35.7599840149587 36.0 34.0 40.0 30.0 41.0 24 35.62971846272271 36.0 34.0 40.0 30.0 41.0 25 35.50174301834151 36.0 34.0 40.0 29.0 41.0 26 35.44457732542536 36.0 34.0 40.0 29.0 41.0 27 35.35584781178941 36.0 34.0 40.0 29.0 41.0 28 35.36463147401546 36.0 34.0 40.0 29.0 41.0 29 35.40083007193269 36.0 34.0 40.0 29.0 41.0 30 35.3265726242896 36.0 34.0 40.0 29.0 41.0 31 35.204394706650895 36.0 34.0 40.0 29.0 41.0 32 35.02654342652042 35.0 34.0 40.0 29.0 41.0 33 34.856283566374785 35.0 34.0 40.0 27.0 41.0 34 34.746292768095984 35.0 34.0 40.0 27.0 41.0 35 34.60457815122085 35.0 33.0 40.0 26.0 41.0 36 34.39813075291904 35.0 33.0 40.0 25.0 41.0 37 34.299644318084624 35.0 33.0 40.0 24.0 41.0 38 34.32876909283416 35.0 33.0 40.0 25.0 41.0 39 34.28141193333471 35.0 33.0 40.0 24.0 41.0 40 34.07532803251275 35.0 33.0 40.0 23.0 41.0 41 34.03577611504511 35.0 33.0 40.0 23.0 41.0 42 33.989914972557045 35.0 33.0 40.0 23.0 41.0 43 33.93499219918187 35.0 33.0 40.0 23.0 41.0 44 33.728435677904365 35.0 33.0 39.0 23.0 41.0 45 33.73346713186479 35.0 33.0 39.0 23.0 41.0 46 33.66412759130201 35.0 33.0 39.0 23.0 41.0 47 33.63969731645958 35.0 33.0 39.0 23.0 41.0 48 33.56427638195401 35.0 33.0 39.0 23.0 41.0 49 33.52146404692878 35.0 33.0 39.0 24.0 41.0 50 33.45091825509412 35.0 32.0 39.0 24.0 41.0 51 33.36727696885866 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 8.0 14 25.0 15 53.0 16 177.0 17 452.0 18 982.0 19 1825.0 20 3075.0 21 4884.0 22 7275.0 23 10252.0 24 14054.0 25 18671.0 26 23570.0 27 27848.0 28 31457.0 29 36070.0 30 43396.0 31 53279.0 32 65994.0 33 85616.0 34 145664.0 35 208113.0 36 90881.0 37 110213.0 38 150983.0 39 221341.0 40 108.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.521177230458875 24.966009667705794 27.608776436515498 13.904036665319833 2 28.73458637968307 27.776737340997503 29.7444900270448 13.744186252274623 3 28.481170388153377 26.69236463589792 30.68427478934842 14.14219018660029 4 25.36615182250116 28.342186057622833 30.39635234334217 15.895309776533843 5 22.633727257444693 33.32084809197002 30.026366470343618 14.019058180241665 6 20.797733191375155 40.59271471420103 27.200376326802665 11.40917576762115 7 85.67554495129282 5.6496208713912 6.349408818905998 2.3254253584099898 8 87.54449710529187 4.280201258158417 5.65566687409863 2.519634762451079 9 83.53857792117782 5.818097898055546 7.296198096541391 3.3471260842252417 10 53.65016353700006 22.981003754420218 12.94073147784951 10.42810123073021 11 48.84174809108524 20.271657224088454 18.14125231886323 12.745342365963069 12 45.925878956076524 21.09000581006114 20.61207666921287 12.372038564649465 13 22.630114402168303 43.38508318414945 19.362028743581654 14.6227736701006 14 14.662220151179561 45.430696587989985 23.888494014457322 16.018589246373136 15 13.15145679172553 23.595484078367992 48.59349332137896 14.65956580852752 16 13.984772920986119 18.39828116566932 47.22923492996959 20.38771098337497 17 14.141305405716276 19.463926008723938 27.495966873803702 38.89880171175608 18 19.869819239265397 24.72365343722627 33.92013967740889 21.486387646099445 19 29.027006461849723 26.647462006034207 22.312404333066915 22.01312719904916 20 32.490481232322814 23.130236796857258 23.372298100375442 21.006983870444486 21 20.734250162947145 29.319279080535704 27.044212500774183 22.902258255742964 22 22.196866695962743 26.676069921283997 23.035933900969425 28.091129481783838 23 19.802059769897983 31.862655463374495 22.26175062745711 26.07353413927041 24 19.900417911504217 23.783205089259646 38.80671076807828 17.50966623115785 25 16.858614964004165 26.887090162121353 33.898536277490884 22.355758596383605 26 16.49673958244241 35.99178038558751 25.176292591139806 22.33518744083028 27 17.635526311908855 35.732981977013395 26.41011953389743 20.22137217718032 28 14.719509713419471 29.737927902155032 36.59062958058436 18.951932803841128 29 14.91895407102431 24.29947473508186 36.61260163920405 24.16896955468978 30 17.24305225810828 31.78634311212828 30.370103843783085 20.60050078598035 31 27.998817342885037 29.234708774372027 22.047486190045035 20.718987692697905 32 30.005279192607954 27.063825143703163 23.786670481055367 19.14422518263352 33 27.221389872798003 30.28243680452536 22.326339631990137 20.169833690686502 34 18.799086906127698 28.807064680431893 26.54379517912389 25.850053234316523 35 19.362028743581654 26.508846334205334 29.934865380588498 24.194259541624515 36 29.369932786145508 26.984858449804904 23.84034718801889 19.804861576030696 37 19.305771425706425 33.84766137666007 27.953988444761656 18.892578752871852 38 20.192100676267522 32.878088991261315 23.918871491475137 23.01093884099603 39 19.624956129614503 32.34618821648819 26.356590290414577 21.672265363482733 40 23.984124081671172 26.477067954121164 24.69349715542946 24.845310808778205 41 16.292428929975493 25.69890316663078 27.07812910132806 30.930538802065666 42 21.708762574948317 27.170588703707526 22.377804386743623 28.742844334600537 43 22.38311307204771 28.11096331993382 24.27433221162779 25.231591396390684 44 19.740198839757333 30.76744419244574 26.02221684799759 23.470140119799332 45 16.81009947886406 37.40661875086635 20.998725915527018 24.784555854742575 46 21.0854344421604 34.69977909970596 24.296599197208813 19.91818726092483 47 20.733955235985807 29.534502030572128 26.210453981071584 23.521088752370474 48 22.671699103716964 24.13394697803089 29.83171467586052 23.362639242391623 49 20.305057702459987 23.962668145233835 31.25296770254846 24.47930644975772 50 18.517947780232223 33.42090206360395 25.919361070230956 22.14178908593287 51 17.058649175531677 34.296171553114874 22.712988878304287 25.932190393049158 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 976.0 1 1266.0 2 1556.0 3 3599.0 4 5642.0 5 4518.5 6 3395.0 7 3791.5 8 4188.0 9 4590.0 10 4992.0 11 5297.0 12 5602.0 13 5452.0 14 5302.0 15 5067.5 16 4833.0 17 4734.0 18 4635.0 19 4433.5 20 4232.0 21 4967.5 22 5703.0 23 5712.5 24 5722.0 25 6101.5 26 8320.0 27 10159.0 28 11074.0 29 11989.0 30 14666.0 31 17343.0 32 21997.5 33 26652.0 34 33120.0 35 39588.0 36 41807.5 37 44027.0 38 49604.5 39 55182.0 40 74661.0 41 94140.0 42 115330.5 43 136521.0 44 138635.0 45 140749.0 46 136058.0 47 131367.0 48 121293.5 49 111220.0 50 104144.0 51 97068.0 52 89439.0 53 81810.0 54 72964.5 55 64119.0 56 57319.0 57 50519.0 58 49745.5 59 48972.0 60 45891.5 61 42811.0 62 36467.5 63 30124.0 64 25746.0 65 21368.0 66 16685.0 67 12002.0 68 9943.0 69 7884.0 70 7254.0 71 6624.0 72 5789.5 73 4955.0 74 3917.0 75 2197.0 76 1515.0 77 1125.5 78 736.0 79 605.5 80 475.0 81 311.0 82 147.0 83 91.5 84 36.0 85 24.0 86 12.0 87 8.5 88 5.0 89 6.0 90 7.0 91 4.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1356268.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.821397635890946 #Duplication Level Percentage of deduplicated Percentage of total 1 81.04627588728845 15.25404185382776 2 7.301456597489926 2.748472358851145 3 2.4869624274457323 1.4042432625743015 4 1.2228238044203128 0.920610122465106 5 0.7399209167723075 0.6963172896842286 6 0.47915390536180014 0.54110077089627 7 0.344400482734958 0.4537468902083207 8 0.2570641581468117 0.3870645390733359 9 0.22424405023680166 0.3798527793290594 >10 2.911256803065076 13.761968884724643 >50 1.4926264430321665 20.645419256703494 >100 1.4874780891212231 41.337201044985335 >500 0.005148353343603807 0.6146391139546127 >1k 7.92054360554432E-4 0.44007146844385553 >5k 3.96027180277216E-4 0.4152503642785771 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5571 0.41075952540353383 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3021 0.2227435875505431 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2883 0.21256860738438124 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.373174033450616E-5 0.0 0.0 0.08361179353932999 0.0 2 7.373174033450616E-5 0.0 0.0 0.2740608788233594 0.0 3 7.373174033450616E-5 0.0 0.0 0.38001338968404474 0.0 4 7.373174033450616E-5 0.0 0.0 0.604379075521947 0.0 5 7.373174033450616E-5 0.0 0.0 0.981222000371608 0.0 6 7.373174033450616E-5 0.0 0.0 1.3457517245854065 0.0 7 7.373174033450616E-5 0.0 0.0 1.556771965422763 0.0 8 7.373174033450616E-5 0.0 0.0 2.0327103492820005 0.0 9 7.373174033450616E-5 0.0 0.0 2.179510244288002 0.0 10 7.373174033450616E-5 0.0 0.0 2.4344746023647246 0.0 11 1.4746348066901232E-4 0.0 0.0 2.6957798901102143 0.0 12 1.4746348066901232E-4 0.0 0.0 2.925306797771532 0.0 13 1.4746348066901232E-4 0.0 0.0 3.015333252719964 0.0 14 1.4746348066901232E-4 0.0 0.0 3.050871951561196 0.0 15 1.4746348066901232E-4 0.0 0.0 3.1080140503204383 0.0 16 1.4746348066901232E-4 0.0 0.0 3.2212660034742395 0.0 17 1.4746348066901232E-4 0.0 0.0 3.3530983551923366 0.0 18 1.4746348066901232E-4 0.0 0.0 3.5490035892611194 0.0 19 1.4746348066901232E-4 0.0 0.0 3.626126989651013 0.0 20 1.4746348066901232E-4 0.0 0.0 3.709296392748336 0.0 21 1.4746348066901232E-4 0.0 0.0 3.8260874694381934 0.0 22 1.4746348066901232E-4 0.0 0.0 3.9446481078960796 0.0 23 1.4746348066901232E-4 0.0 0.0 4.090268295056729 0.0 24 2.2119522100351848E-4 0.0 0.0 4.194746171110724 0.0 25 2.2119522100351848E-4 0.0 0.0 4.276219744180354 0.0 26 2.2119522100351848E-4 0.0 0.0 4.355702560260951 0.0 27 2.2119522100351848E-4 0.0 0.0 4.435996425485229 0.0 28 2.2119522100351848E-4 0.0 0.0 4.51864970640021 0.0 29 2.2119522100351848E-4 0.0 0.0 4.606759136099945 0.0 30 2.2119522100351848E-4 0.0 0.0 4.728195312430876 0.0 31 2.2119522100351848E-4 0.0 0.0 4.8311248219378475 0.0 32 2.9492696133802464E-4 0.0 0.0 4.921372472107283 0.0 33 3.686587016725308E-4 0.0 0.0 5.008965779624676 0.0 34 3.686587016725308E-4 0.0 0.0 5.105628091203213 0.0 35 3.686587016725308E-4 0.0 0.0 5.236133271595289 0.0 36 3.686587016725308E-4 0.0 0.0 5.343781612483668 0.0 37 3.686587016725308E-4 0.0 0.0 5.455485199090445 0.0 38 3.686587016725308E-4 0.0 0.0 5.555465438984036 0.0 39 3.686587016725308E-4 0.0 0.0 5.659205997634686 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAAAG 20 7.033736E-4 45.0 19 TCGTTGC 20 7.033736E-4 45.0 43 ACACGGT 25 3.8911792E-5 45.0 13 CTATCGA 20 7.033736E-4 45.0 24 GAATCGG 20 7.033736E-4 45.0 22 GCAAACG 25 3.8911792E-5 45.0 10 TATGCGT 20 7.033736E-4 45.0 20 ACGATAT 20 7.033736E-4 45.0 14 ACTAGCG 20 7.033736E-4 45.0 21 ACCTACG 20 7.033736E-4 45.0 39 TCCGTAC 20 7.033736E-4 45.0 13 GTTCACG 25 3.8911792E-5 45.0 1 TTACGTC 25 3.8911792E-5 45.0 16 CCGAACT 45 3.8562575E-10 45.0 42 GGACCGT 40 6.8157533E-9 45.0 8 GTGACGT 20 7.033736E-4 45.0 14 CGCCGAA 20 7.033736E-4 45.0 28 GCGTCTA 25 3.8911792E-5 45.0 9 TATCGTG 35 1.2121382E-7 45.0 1 TACGTCC 25 3.8911792E-5 45.0 17 >>END_MODULE