##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546210_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 726030 Sequences flagged as poor quality 0 Sequence length 50 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.53782763797639 33.0 31.0 34.0 31.0 34.0 2 32.94090877787419 34.0 31.0 34.0 31.0 34.0 3 32.82628128314257 34.0 31.0 34.0 31.0 34.0 4 36.436181700480695 37.0 37.0 37.0 35.0 37.0 5 36.41733950387725 37.0 37.0 37.0 35.0 37.0 6 36.50382353346281 37.0 37.0 37.0 35.0 37.0 7 36.58311777750231 37.0 37.0 37.0 35.0 37.0 8 36.53765546878228 37.0 37.0 37.0 35.0 37.0 9 38.39340660854235 39.0 39.0 39.0 37.0 39.0 10 38.267052325661474 39.0 39.0 39.0 37.0 39.0 11 38.1006459788163 39.0 38.0 39.0 35.0 39.0 12 37.29054722256656 39.0 35.0 39.0 35.0 39.0 13 37.082862967095025 39.0 35.0 39.0 35.0 39.0 14 38.32960896932634 40.0 35.0 41.0 35.0 41.0 15 38.49057339228406 40.0 35.0 41.0 35.0 41.0 16 38.57147087585913 41.0 35.0 41.0 35.0 41.0 17 38.51734225858436 40.0 35.0 41.0 35.0 41.0 18 38.186942688318666 39.0 36.0 41.0 35.0 41.0 19 37.759432805806924 37.0 36.0 41.0 35.0 41.0 20 37.2438260126992 36.0 35.0 41.0 35.0 41.0 21 37.1871286310483 36.0 35.0 41.0 35.0 41.0 22 37.16010908640139 35.0 35.0 41.0 35.0 41.0 23 37.095768769885545 35.0 35.0 41.0 35.0 41.0 24 37.03138851011666 35.0 35.0 41.0 35.0 41.0 25 36.99363111717147 35.0 35.0 41.0 35.0 41.0 26 36.96604134815366 35.0 35.0 41.0 35.0 41.0 27 36.87452446868587 35.0 35.0 41.0 34.0 41.0 28 36.79995179262565 36.0 35.0 41.0 34.0 41.0 29 36.648973182926326 36.0 35.0 41.0 34.0 41.0 30 36.334112915444265 36.0 35.0 41.0 34.0 41.0 31 35.80140352327039 35.0 35.0 41.0 33.0 41.0 32 35.0719832513808 35.0 35.0 41.0 29.0 41.0 33 34.27690315827169 35.0 35.0 41.0 18.0 41.0 34 33.56912937481922 35.0 35.0 41.0 14.0 41.0 35 33.08783108136027 35.0 34.0 41.0 10.0 41.0 36 32.86571904742228 35.0 34.0 40.0 10.0 41.0 37 32.716295469884166 35.0 34.0 40.0 10.0 41.0 38 32.67859317108108 35.0 33.0 40.0 10.0 41.0 39 32.60311281902952 35.0 33.0 40.0 10.0 41.0 40 32.427406580995275 35.0 33.0 40.0 8.0 41.0 41 32.27624065121276 35.0 33.0 40.0 8.0 41.0 42 32.137194055342064 35.0 33.0 40.0 7.0 41.0 43 31.988727738523203 35.0 33.0 40.0 7.0 41.0 44 31.787572138892333 35.0 33.0 40.0 7.0 41.0 45 31.707973499717642 35.0 32.0 40.0 7.0 41.0 46 31.65570568709282 35.0 32.0 40.0 7.0 41.0 47 31.610999545473327 35.0 32.0 40.0 7.0 41.0 48 31.582372629230196 35.0 32.0 40.0 7.0 41.0 49 31.521985317411126 35.0 32.0 40.0 7.0 41.0 50 31.308056140930816 35.0 31.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 4.0 13 5.0 14 10.0 15 17.0 16 28.0 17 54.0 18 103.0 19 261.0 20 492.0 21 921.0 22 1864.0 23 3471.0 24 7218.0 25 14456.0 26 25963.0 27 32137.0 28 28765.0 29 20772.0 30 15710.0 31 12477.0 32 12926.0 33 16933.0 34 46172.0 35 142868.0 36 28045.0 37 31382.0 38 65867.0 39 217106.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.81296916105395 21.893172458438357 27.21939864743881 28.074459733068878 2 42.38034241009325 21.52913791441125 27.393771607233862 8.696748068261643 3 22.1255320028098 22.24067875983086 46.842554715369886 8.79123452198945 4 19.726733055107914 24.51937247772131 45.405561753646545 10.348332713524234 5 16.88428852802226 26.905775243447238 45.859262013966365 10.350674214564135 6 14.454223654669917 34.963568998526235 42.488740134705175 8.093467212098673 7 69.85537787694723 4.3003732628128315 24.641543737862072 1.202705122377863 8 71.18121840695288 3.316667355343443 23.89419170006749 1.6079225376361856 9 68.42706224260705 4.240182912551823 25.380356183628777 1.9523986612123467 10 43.08692478272248 18.737242262716418 29.548503505364792 8.627329449196314 11 38.87525308871535 16.043689654697467 35.52263680564164 9.558420450945553 12 33.91609162155834 17.361541534096386 39.36448907069956 9.357877773645718 13 14.15437378620718 37.58687657534813 38.48670165144691 9.772047986997782 14 9.101001336032946 37.45699213531121 43.46073853697506 9.981267991680784 15 8.002837348318941 19.45195102130766 63.181135765739704 9.364075864633694 16 8.769334600498603 16.908805421263583 59.40167761662741 14.9201823616104 17 9.0081677065686 17.27283996529069 43.095739845460926 30.62325248267978 18 13.351376664876108 21.149126069170695 50.966488988058344 14.53300827789485 19 18.949767915926337 20.94610415547567 41.592909383909756 18.511218544688234 20 19.453879316281697 18.22307618142501 45.964078619340796 16.358965882952496 21 14.027932730052479 25.188215363001532 45.32236959905238 15.461482307893611 22 16.899852623169842 20.240761401044033 39.211878297040066 23.647507678746056 23 11.081773480434693 23.692960345991214 41.004090740052064 24.22117543352203 24 11.567015137115547 18.993430023552747 56.44229577290195 12.997259066429761 25 10.677795683373965 21.987658912166165 52.563117226560884 14.771428177898985 26 10.798451854606558 26.9476467914549 44.113328650331255 18.140572703607287 27 9.980992520970208 33.55742875638747 41.242510640056196 15.219068082586118 28 9.271930911945788 28.588074872939135 47.10177265402256 15.038221561092517 29 10.076305386829745 22.778122116166 46.3765960084294 20.768976488574854 30 11.935181741801303 31.5108191121579 41.59401126675206 14.959987879288736 31 18.820985358731733 29.363800393923118 39.113948459430055 12.7012657879151 32 19.635827720617606 23.21019792570555 42.576064349957996 14.577910003718856 33 21.76204840020385 27.948569618335327 34.83244494029172 15.456937041169097 34 14.999242455545915 27.348043469278128 34.835475118108064 22.81723895706789 35 15.248681183973115 25.475669049488314 38.53793920361417 20.7377105629244 36 25.710783300965524 25.37925430078647 34.876933460049855 14.033028938198147 37 14.799663925733098 30.280153712656503 39.74243488561079 15.177747475999615 38 15.933363635111498 29.448507637425454 34.15134360839084 20.466785119072213 39 15.949340936324946 29.754280126165582 36.24464553806316 18.051733399446306 40 17.876120821453657 24.36965414652287 34.14542098811344 23.60880404391003 41 12.222773163643376 26.39271104499814 37.43633183201796 23.948183959340525 42 16.257317190749692 27.137583846397533 34.109472060383176 22.495626902469596 43 18.455573461151744 23.486908254479843 35.20818698951834 22.849331294850074 44 13.77160723386086 29.131578584906958 34.93891436992962 22.157899811302563 45 16.08721402696858 35.96614464967012 29.034888365494538 18.911752957866753 46 22.14398854041844 29.783755492197294 31.86479897524896 16.20745699213531 47 17.728881726650414 30.30356872305552 32.14398854041844 19.823561009875625 48 17.42572620966076 29.83154966048235 34.288528022258035 18.45419610759886 49 20.690880542126358 24.72432268639037 35.65637783562663 18.928418935856644 50 18.7409611173092 29.83664586862802 31.43823257992094 19.98416043414184 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3042.0 1 3458.5 2 3875.0 3 15273.5 4 26672.0 5 19635.5 6 12599.0 7 14474.5 8 16350.0 9 18101.5 10 19853.0 11 19899.0 12 19945.0 13 18574.5 14 17204.0 15 15388.5 16 13573.0 17 12119.5 18 10666.0 19 9637.0 20 8608.0 21 9088.0 22 9568.0 23 8249.5 24 6931.0 25 7256.5 26 7582.0 27 10511.0 28 13440.0 29 12920.5 30 12401.0 31 17971.0 32 23541.0 33 25932.0 34 28323.0 35 30626.0 36 32929.0 37 34034.5 38 35140.0 39 39678.5 40 44217.0 41 52358.0 42 60499.0 43 62925.0 44 65351.0 45 60550.5 46 55750.0 47 49955.0 48 44160.0 49 39747.5 50 35335.0 51 29731.5 52 24128.0 53 20482.0 54 16836.0 55 14799.5 56 12763.0 57 11812.0 58 10861.0 59 9796.5 60 8732.0 61 8435.0 62 8138.0 63 6893.5 64 5649.0 65 4842.0 66 4035.0 67 3254.5 68 2474.0 69 2158.0 70 1842.0 71 1600.5 72 1359.0 73 977.5 74 596.0 75 555.5 76 515.0 77 404.5 78 294.0 79 234.5 80 175.0 81 102.5 82 30.0 83 33.0 84 36.0 85 22.5 86 9.0 87 5.5 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 726030.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.789186658368617 #Duplication Level Percentage of deduplicated Percentage of total 1 79.49394083114836 20.500840783037955 2 8.628115034140887 4.450241382506716 3 3.0807492695506338 2.383500538802222 4 1.6077640156828346 1.6585170521221164 5 0.9409937619393929 1.2133731885507741 6 0.658260835000144 1.018560692622738 7 0.4954745664386968 0.8944520254853271 8 0.37775007780163944 0.7793493813311797 9 0.30374440181469314 0.7049988967350276 >10 3.337797123758918 20.066773220777335 >50 0.599118734365309 10.647347490294855 >100 0.4135367450274415 21.722115976575473 >500 0.056318233758600976 9.941895360997883 >1k 0.005900005441377245 1.9319705666452045 >5k 0.0 0.0 >10k+ 5.363641310342951E-4 2.0860634435151666 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15081 2.077186893103591 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2531 0.34860818423481127 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1573 0.21665771386857294 No Hit TGTTTTGGGGCTACATGTTTTTATCTTTGAGACAATATTTTTAAGGTTTT 1338 0.18428990537581091 No Hit TTTTGCGGGGGGAATTCAATACCTTTACAAATGCTTTAACAAGAGGAAAT 1124 0.15481453934410425 No Hit TTAACGGGGGGGGAATTCAATACCTTTACAAATGCTTTAACAAGAGGAAA 1105 0.1521975675936256 No Hit TTAATAGGGATCACTAAAATAAAGAATATGTTTTTATTCCCAGAGGCATC 1097 0.15109568475131882 No Hit TATACAGGTGGGAATTCAATACCTTTACAAATGCTTTAACAAGAGGAAAT 1094 0.15068247868545376 No Hit TTCTTAGGGCAAAACAATCACCATCATGCTATTAATGATATTAAAATCCC 1062 0.14627494731622662 No Hit GGTAATGGGGGGAATTCAATACCTTTACAAATGCTTTAACAAGAGGAAAT 1021 0.1406277977494043 No Hit ATGGTTTTCAAAACAATCACCATCATGCTATTAATGATATTAAAATCCCA 1017 0.1400768563282509 No Hit TTGAAAGGGGGGAATTCAATACCTTTACAAATGCTTTAACAAGAGGAAAT 1005 0.1384240320647907 No Hit TAGTAAGGGGGGAATTCAATACCTTTACAAATGCTTTAACAAGAGGAAAT 996 0.13718441386719557 No Hit TATGAAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 994 0.1369089431566189 No Hit TTTTATGGGCTAAAAATAATGTTAAGAATTTTTGCTGGTTTTTTGCGACG 984 0.13553158960373538 No Hit ATAGTTGGGGGGAATTCAATACCTTTACAAATGCTTTAACAAGAGGAAAT 979 0.13484291282729363 No Hit ATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCC 970 0.1336032946296985 No Hit TGTGTAGGGACTTGTGTTGTGGTTTCTCCAGGACAATTTTTTTATTATTA 964 0.1327768824979684 No Hit TGAGAAGGGAAGATTTAGAGGGATAGAATTGAACGGCATTAGGAGAATTG 957 0.13181273501094998 No Hit GGAAATGGGACCATCATGCTATTAATGATATTAAAATCCCAACTATACCA 953 0.13126179358979656 No Hit TTTGTTGGGGTTTTCAAAACAATCACCATCATGCTATTAATGATATTAAA 953 0.13126179358979656 No Hit GGATTTGGGCATCATGCTATTAATGATATTAAAATCCCAACTATACCAAA 934 0.12864482183931794 No Hit TTGGCAGGGGGAATTCATCGACAATAAACAAAGAAATAGAACTTTTAACA 924 0.12726746828643443 No Hit TAAAGAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 908 0.12506370260182087 No Hit TTACATGGGGGTTTTCAAAACAATCACCATCATGCTATTAATGATATTAA 878 0.1209316419431704 No Hit AATTGTGGGATTTCCATTTTTGTCTCATTAAATTATAAACTTCATTTAAA 871 0.11996749445615194 No Hit GGTTTAGGGTAGGGATAGTCACCTTTTAAATCCTGTTGAAAAGCCATGTT 864 0.11900334696913352 No Hit TGGCTAGGGAACTTGAATCTTTTCTTGCATTGTATTTTTCTAAAGTTTGT 861 0.11859014090326846 No Hit TGTTAGGGGTAATTTTAAATAATCTAAGTATAGGTAATATAACAAAAAAG 861 0.11859014090326846 No Hit AGATAAGGGATTTCTTAAAGGACTGAATATTCGGTGGCAGTATGGGATTT 855 0.11776372877153837 No Hit TATATTGGGGGTTTTTACTATGTTGGGTATGCTGTTCGATTTCTTAAAGG 854 0.11762599341625002 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTAACGCGATCGTATGC 845 0.11638637521865487 No Hit TTGCTAGGGAATCACCATCATGCTATTAATGATATTAAAATCCCAACTAT 811 0.11170337313885102 No Hit GGATTTGGGATATCTTTTCTTTAAACCGTTTTCTGTTTCTTGGTCTATTA 806 0.11101469636240927 No Hit GAAGATGGGAAGCTATACTATATAGGTGGCTATCTATCCCTACCAAGGCT 793 0.10922413674366073 No Hit TAATAGGGGGTTTTCAAAACAATCACCATCATGCTATTAATGATATTAAA 782 0.10770904783548889 No Hit TGACCCAGGGGGAATTCATCGACAATAAACAAAGAAATAGAACTTTTAAC 782 0.10770904783548889 No Hit TTTGTAGGGGGGAATTCATCGACAATAAACAAAGAAATAGAACTTTTAAC 776 0.1068826357037588 No Hit AGTGCTGGGTCATGAATTAAAAGTTTTATCTGGTATAAATAAAAGTAAAT 773 0.10646942963789376 No Hit ATTATAGGGATCATATATGGGCTTTGTTTCTTTTCATTGATTTTTCTTAG 762 0.10495434072972191 No Hit ATAAGAGGGGGGAATTCATCGACAATAAACAAAGAAATAGAACTTTTAAC 759 0.10454113466385688 No Hit TAGTTAGGGCTAGCCCTAGCCCTACACAAATATAATTATACTATTATATA 740 0.10192416291337823 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 740 0.10192416291337823 No Hit AAATATGGGGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGC 733 0.10096001542635981 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04283569549467653 0.0 2 0.0 0.0 0.0 0.22354448163299037 0.0 3 0.0 0.0 0.0 0.3439251821550074 0.0 4 0.0 0.0 0.0 0.5658168395245375 0.0 5 0.0 0.0 0.0 0.9658003112819029 0.0 6 0.0 0.0 0.0 1.3493932757599547 0.0 7 0.0 0.0 0.0 1.5627453411016075 0.0 8 0.0 0.0 0.0 2.029117254107957 0.0 9 0.0 0.0 0.0 2.2570692671101744 0.0 10 0.0 0.0 0.0 2.6715149511728167 0.0 11 0.0 0.0 0.0 3.2132281035218933 0.0 12 0.0 0.0 0.0 3.618996460201369 0.0 13 0.0 0.0 0.0 3.7813864440863325 0.0 14 0.0 0.0 0.0 3.838408881175709 0.0 15 0.0 0.0 0.0 3.913750120518436 0.0 16 0.0 0.0 0.0 4.109885266449044 0.0 17 0.0 0.0 0.0 4.342658016886355 0.0 18 0.0 0.0 0.0 4.745396195749487 0.0 19 0.0 0.0 0.0 4.917703125215212 0.0 20 0.0 0.0 0.0 5.16053055658857 0.0 21 0.0 0.0 0.0 5.411071167858077 0.0 22 0.0 0.0 0.0 5.633238295938185 0.0 23 0.0 0.0 0.0 5.92812969161054 0.0 24 0.0 0.0 0.0 6.123713896119995 0.0 25 0.0 0.0 0.0 6.262000192829498 0.0 26 0.0 0.0 0.0 6.444086332520695 0.0 27 0.0 0.0 0.0 6.612674407393634 0.0 28 0.0 0.0 0.0 6.813768026114623 0.0 29 0.0 0.0 0.0 6.984835337382753 0.0 30 0.0 0.0 0.0 7.255485310524358 0.0 31 0.0 0.0 0.0 7.5229673704943325 0.0 32 0.0 0.0 0.0 7.740589231849923 0.0 33 0.0 0.0 0.0 7.936311171714667 0.0 34 0.0 0.0 0.0 8.1463575885294 0.0 35 0.0 0.0 0.0 8.485737503959891 0.0 36 0.0 0.0 0.0 8.70611407242125 0.0 37 0.0 0.0 0.0 8.94632453204413 0.0 38 0.0 0.0 0.0 9.14480117901464 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTACG 40 8.305506E-9 44.000004 1 GTGTTAG 20 7.854562E-4 44.000004 1 ACAACAG 20 7.854562E-4 44.000004 12 AAGTAGC 20 7.854562E-4 44.000004 37 TAATACG 20 7.854562E-4 44.000004 1 GGTACTC 20 7.854562E-4 44.000004 8 GCCTTAC 20 7.854562E-4 44.000004 23 GATAAGT 20 7.854562E-4 44.000004 34 CTCCGCT 20 7.854562E-4 44.000004 13 CATGCGG 20 7.854562E-4 44.000004 2 TTAGCCA 20 7.854562E-4 44.000004 40 CAGCATT 20 7.854562E-4 44.000004 37 ATGTGCG 20 7.854562E-4 44.000004 1 TGTGGAC 20 7.854562E-4 44.000004 26 GCTATGT 65 0.0 44.000004 9 GAATCAC 80 0.0 44.000004 9 ACTTCGA 20 7.854562E-4 44.000004 33 GTTAGTC 20 7.854562E-4 44.000004 36 GGTCATA 20 7.854562E-4 44.000004 8 AGGCGTA 20 7.854562E-4 44.000004 13 >>END_MODULE