##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546011_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 375057 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.930434573944762 31.0 28.0 33.0 23.0 33.0 2 28.683568097649157 31.0 28.0 33.0 16.0 33.0 3 28.10657046795554 31.0 26.0 33.0 16.0 34.0 4 32.145569873379245 35.0 32.0 35.0 25.0 37.0 5 33.66390708612291 35.0 33.0 35.0 28.0 37.0 6 33.508645352573076 35.0 33.0 37.0 28.0 37.0 7 34.453733699144394 35.0 35.0 37.0 32.0 37.0 8 34.84653799289175 35.0 35.0 37.0 32.0 37.0 9 36.67144993960918 39.0 37.0 39.0 32.0 39.0 10 36.33073372847327 38.0 35.0 39.0 32.0 39.0 11 36.40498377579941 38.0 35.0 39.0 32.0 39.0 12 35.21310894077433 37.0 34.0 39.0 30.0 39.0 13 35.472290878453144 37.0 35.0 39.0 30.0 39.0 14 36.159354444791056 38.0 35.0 40.0 30.0 41.0 15 36.63458887582421 38.0 35.0 40.0 31.0 41.0 16 36.140754605299996 38.0 34.0 40.0 31.0 41.0 17 35.773874371095594 37.0 34.0 40.0 30.0 41.0 18 35.439402544146624 37.0 34.0 39.0 29.0 40.0 19 34.83894714670037 37.0 33.0 39.0 27.0 41.0 20 35.43529650159842 36.0 34.0 39.0 30.0 41.0 21 35.604254819934035 36.0 34.0 39.0 30.0 40.0 22 35.95718250825875 37.0 34.0 40.0 31.0 41.0 23 36.311592637919034 37.0 35.0 40.0 32.0 41.0 24 35.86956116003701 36.0 35.0 40.0 31.0 41.0 25 35.58399389959393 36.0 34.0 40.0 30.0 41.0 26 35.74228450608841 37.0 34.0 40.0 31.0 41.0 27 36.05330389780753 37.0 35.0 40.0 31.0 41.0 28 35.99966405106424 37.0 35.0 40.0 31.0 41.0 29 36.14849476212949 37.0 35.0 40.0 31.0 41.0 30 35.82189640507976 37.0 35.0 40.0 31.0 41.0 31 35.123413241187336 36.0 34.0 40.0 29.0 41.0 32 35.1416478028673 37.0 34.0 40.0 29.0 41.0 33 34.902345510149125 37.0 34.0 40.0 27.0 41.0 34 34.56789501329131 37.0 34.0 40.0 24.0 41.0 35 34.32394542696177 37.0 34.0 40.0 23.0 41.0 36 33.930869174552136 36.0 33.0 40.0 21.0 41.0 37 33.85741100686029 36.0 33.0 40.0 20.0 41.0 38 33.73273395777175 36.0 33.0 40.0 19.0 41.0 39 33.48038831430956 36.0 33.0 40.0 18.0 41.0 40 33.3404069248141 36.0 33.0 40.0 18.0 41.0 41 33.04803003276835 35.0 33.0 39.0 18.0 40.0 42 33.249639388146335 36.0 33.0 40.0 18.0 41.0 43 33.04075380542157 35.0 33.0 40.0 17.0 40.0 44 32.896234439031936 35.0 33.0 39.0 16.0 40.0 45 32.84170139472133 35.0 32.0 39.0 17.0 40.0 46 32.64302492687778 35.0 32.0 39.0 17.0 40.0 47 32.628205846044736 35.0 32.0 39.0 17.0 40.0 48 32.65236750680563 35.0 32.0 39.0 17.0 40.0 49 32.71567255110556 35.0 32.0 39.0 18.0 40.0 50 32.79951847319207 35.0 32.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 0.0 12 2.0 13 7.0 14 18.0 15 37.0 16 87.0 17 205.0 18 334.0 19 639.0 20 1040.0 21 1521.0 22 2015.0 23 2933.0 24 4250.0 25 6494.0 26 9273.0 27 11074.0 28 10644.0 29 10525.0 30 11450.0 31 13821.0 32 18603.0 33 28845.0 34 45815.0 35 35559.0 36 36644.0 37 52382.0 38 58079.0 39 12758.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.287585620319042 22.847993771613382 28.061068050989586 21.80335255707799 2 36.469656612194946 19.99722708814927 30.58495108743471 12.948165212221074 3 27.63766574147396 19.09603073666136 39.69290001253143 13.573403509333248 4 25.096985258240746 25.27402501486441 35.759897828863345 13.869091898031499 5 20.211327878162518 29.973577349576196 36.20009758516706 13.614997187094227 6 18.670762044169287 36.45499217452281 34.37664141717126 10.49760436413665 7 77.75991382643171 4.6392948271862675 15.070242656449553 2.5305486899324636 8 78.96639710763964 3.2824344033040314 14.802816638537609 2.948351850518721 9 75.463729513114 4.588902486822003 16.313520344907573 3.6338476551564165 10 44.392452347243214 22.160898210138726 21.509797177495688 11.936852265122369 11 37.89797284146143 20.62086562842448 28.11012726065638 13.37103426945771 12 34.09695059684261 20.434760583058043 31.345368837270065 14.122919982829277 13 20.669124959672796 33.033112300263696 31.631458684946555 14.666304055116955 14 15.785600588710516 33.25334549148529 34.662997890987235 16.298056028816955 15 14.818814206907216 21.3583535302634 48.09855568620237 15.72427657662702 16 16.700128247173097 17.397622228087997 46.2492367826757 19.653012742063204 17 17.145927152406166 18.638233655151083 34.871232905931635 29.344606286511116 18 21.097059913559807 20.849630856109872 38.6455925366011 19.40771669372922 19 25.395339908333938 22.502446294829852 32.15671217974867 19.945501617087537 20 26.837520696854078 21.531127268655165 31.957275827407567 19.67407620708319 21 21.459404837131423 25.601441914162383 33.65035181319106 19.288801435515136 22 21.7254977243459 22.064646173781586 32.024732240699414 24.185123861173103 23 19.004044718536118 25.795012491434637 32.128716435101865 23.072226354927384 24 18.33694611752347 21.034669396918336 42.3290326537033 18.29935183185489 25 17.580527759780512 22.58936641630472 39.089791684997216 20.74031413891755 26 17.20378502467625 28.20797905385048 33.85725369743799 20.73098222403528 27 17.236846665973438 28.728699904281218 34.716323118885924 19.318130310859416 28 16.079689220571804 25.131113404095913 40.80899703245107 17.980200342881215 29 16.828375420269452 22.013987207277825 40.14883071106525 21.008806661387467 30 19.200014931063812 25.723823312189882 36.540312539160716 18.535849217585593 31 26.072037050368348 23.673734925624636 31.344035706572598 18.910192317434415 32 26.741801912775927 23.278328360755832 32.192706708580296 17.78716301788795 33 25.653967263642592 23.989153648645406 30.80465102637732 19.552228061334677 34 19.649279976110297 24.965005319191484 32.756087741329985 22.629626963368235 35 20.244122893320217 24.255513161999374 34.07508725340415 21.42527669127626 36 26.0208448315856 24.06860823821446 30.351119963098945 19.559426967101 37 20.347307209304187 29.217425617972737 30.81051680144618 19.6247503712769 38 20.399565932644904 29.236089447737278 28.694038506147066 21.67030611347075 39 19.994027574475346 28.80522160631584 29.045185131859956 22.155565687348858 40 22.773605078694708 24.98526890579299 28.976128961731153 23.26499705378116 41 18.483590494244876 23.47323206872555 30.29326209082886 27.74991534620071 42 21.380750125980853 24.051544165286877 27.954150969052705 26.613554739679568 43 21.20371036935719 24.689580517094733 29.4187283532903 24.687980760257773 44 19.96789821280499 27.37637212477037 29.835998261597567 22.819731400827074 45 18.233495175400005 31.58959838104608 27.959483491842573 22.21742295171134 46 21.206376630752125 28.781491879900923 29.267551332197506 20.744580157149446 47 20.372636692556064 26.17122197425991 30.114889203507733 23.341252129676292 48 21.003207512458104 23.665202889160845 32.6003780758658 22.731211522515242 49 20.8810927405701 23.392710974598526 33.4365176493173 22.28967863551407 50 19.44557760553729 28.36422197159365 31.18619303199247 21.004007390876588 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 161.0 1 312.5 2 464.0 3 5178.0 4 9892.0 5 6929.5 6 3967.0 7 4088.5 8 4210.0 9 4337.0 10 4464.0 11 4448.0 12 4432.0 13 4133.0 14 3834.0 15 3583.5 16 3333.0 17 3081.0 18 2829.0 19 2665.0 20 2501.0 21 2412.0 22 2323.0 23 2303.5 24 2284.0 25 2300.0 26 2316.0 27 2828.0 28 3340.0 29 3388.5 30 3437.0 31 4478.0 32 5519.0 33 6589.5 34 7660.0 35 8240.0 36 8820.0 37 9969.0 38 11118.0 39 13694.5 40 16271.0 41 21493.5 42 26716.0 43 30127.5 44 33539.0 45 33829.0 46 34119.0 47 31762.0 48 29405.0 49 28127.0 50 26849.0 51 25450.5 52 24052.0 53 22012.5 54 19973.0 55 18182.5 56 16392.0 57 15644.0 58 14896.0 59 13513.0 60 12130.0 61 11086.5 62 10043.0 63 8999.0 64 7955.0 65 6710.5 66 5466.0 67 4586.0 68 3706.0 69 3119.5 70 2533.0 71 2118.5 72 1704.0 73 1370.5 74 1037.0 75 869.0 76 701.0 77 517.5 78 334.0 79 257.0 80 180.0 81 133.5 82 87.0 83 61.0 84 35.0 85 22.0 86 9.0 87 11.5 88 14.0 89 8.5 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 375057.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.44417134832879 #Duplication Level Percentage of deduplicated Percentage of total 1 73.06825002678262 25.898435740718135 2 8.69396808472915 6.163009889840838 3 4.1270794007791585 4.388427283481238 4 2.544607819663355 3.6076606229778116 5 1.7191746172698683 3.046735985610539 6 1.282170879714538 2.7267290615063726 7 0.9925446029185455 2.4625944683692724 8 0.8016753888968475 2.273177587983839 9 0.6049755629684652 1.929857176386536 >10 5.980225680109438 41.58077560278861 >50 0.17628754903785226 3.852892067523893 >100 0.008287021535967415 0.4024054574647243 >500 0.0 0.0 >1k 0.0 0.0 >5k 7.533655941788558E-4 1.6672990553482006 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6244 1.6648136149971873 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.6662613949346366E-4 0.0 0.0 0.045326443713888824 0.0 2 2.6662613949346366E-4 0.0 0.0 0.16477495420696053 0.0 3 2.6662613949346366E-4 0.0 0.0 0.21490066843173172 0.0 4 2.6662613949346366E-4 0.0 0.0 0.3215511242291172 0.0 5 2.6662613949346366E-4 0.0 0.0 0.5649807895866495 0.0 6 2.6662613949346366E-4 0.0 0.0 0.8049443151307668 0.0 7 2.6662613949346366E-4 0.0 0.0 0.9857168377073352 0.0 8 2.6662613949346366E-4 0.0 0.0 1.5477647397595566 0.0 9 2.6662613949346366E-4 0.0 0.0 1.810924739439605 0.0 10 2.6662613949346366E-4 0.0 0.0 2.237526562629147 0.0 11 2.6662613949346366E-4 0.0 0.0 2.497487048635274 0.0 12 2.6662613949346366E-4 0.0 0.0 2.761713552873297 0.0 13 7.99878418480391E-4 0.0 0.0 2.8622316074623324 0.0 14 7.99878418480391E-4 0.0 0.0 2.8984927624334436 0.0 15 7.99878418480391E-4 0.0 0.0 2.943285953868345 0.0 16 7.99878418480391E-4 0.0 0.0 3.0427375038994073 0.0 17 7.99878418480391E-4 0.0 0.0 3.173650938390698 0.0 18 7.99878418480391E-4 0.0 0.0 3.372020786173835 0.0 19 7.99878418480391E-4 0.0 0.0 3.450408871184913 0.0 20 7.99878418480391E-4 0.0 0.0 3.550393673494962 0.0 21 7.99878418480391E-4 0.0 0.0 3.6514449803629847 0.0 22 7.99878418480391E-4 0.0 0.0 3.7594285668578378 0.0 23 7.99878418480391E-4 0.0 0.0 3.8834097217222983 0.0 24 7.99878418480391E-4 0.0 0.0 3.9735293568710888 0.0 25 7.99878418480391E-4 0.0 0.0 4.047651423650271 0.0 26 7.99878418480391E-4 0.0 0.0 4.116707593779079 0.0 27 0.0010665045579738546 0.0 0.0 4.197495314045598 0.0 28 0.0010665045579738546 0.0 0.0 4.275083520638196 0.0 29 0.0010665045579738546 0.0 0.0 4.364403277368507 0.0 30 0.0010665045579738546 0.0 0.0 4.483051909443098 0.0 31 0.0010665045579738546 0.0 0.0 4.588902486822003 0.0 32 0.0010665045579738546 0.0 0.0 4.674222851459912 0.0 33 0.0010665045579738546 0.0 0.0 4.76567561730617 0.0 34 0.0013331306974673184 0.0 0.0 4.854728747896987 0.0 35 0.0013331306974673184 0.0 0.0 4.988841696062199 0.0 36 0.0013331306974673184 0.0 0.0 5.0888264983722475 0.0 37 0.0013331306974673184 0.0 0.0 5.181612394915973 0.0 38 0.0013331306974673184 0.0 0.0 5.288262850713358 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTACGG 55 1.8189894E-12 44.000004 2 TCACGAC 50 2.7284841E-11 44.0 25 AGCCGAA 20 7.8496913E-4 44.0 40 GATGTTA 25 4.437087E-5 44.0 11 CACGGGA 75 0.0 44.0 4 AACCCGT 20 7.8496913E-4 44.0 32 TACGGGT 30 2.5231402E-6 44.0 4 TATGCGA 20 7.8496913E-4 44.0 40 GCGTTAG 35 1.4426041E-7 44.0 1 ACGGGAA 80 0.0 44.0 5 GCCCTTA 20 7.8496913E-4 44.0 14 CGGGCTA 25 4.437087E-5 44.0 6 CTGTTAG 25 4.437087E-5 44.0 1 GTCGTAG 20 7.8496913E-4 44.0 1 CGTACAT 25 4.437087E-5 44.0 35 CGGTCTA 50 2.7284841E-11 44.0 31 TTACCGG 35 1.4426041E-7 44.0 2 GATTACG 25 4.437087E-5 44.0 1 ATGCAAG 20 7.8496913E-4 44.0 1 CTAGCGG 25 4.437087E-5 44.0 2 >>END_MODULE