##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1546010_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 326415 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.803391388263407 28.0 25.0 30.0 16.0 33.0 2 25.986357857328862 30.0 25.0 31.0 10.0 33.0 3 26.315242865677128 30.0 25.0 31.0 16.0 33.0 4 28.22655208859887 32.0 19.0 35.0 10.0 37.0 5 31.24234793131443 33.0 30.0 35.0 19.0 37.0 6 29.744187613927057 33.0 28.0 35.0 17.0 37.0 7 29.636340241716834 32.0 28.0 35.0 17.0 35.0 8 32.38449519783098 33.0 32.0 35.0 28.0 35.0 9 26.939282814821624 30.0 23.0 34.0 10.0 35.0 10 31.214086362452704 34.0 28.0 37.0 17.0 37.0 11 33.56717062634989 35.0 32.0 37.0 27.0 39.0 12 33.01377694039796 35.0 31.0 37.0 23.0 39.0 13 33.27387221788214 35.0 32.0 38.0 24.0 39.0 14 32.913343443162844 35.0 31.0 38.0 22.0 40.0 15 31.858808571909993 34.0 27.0 38.0 18.0 40.0 16 30.401219306710782 33.0 27.0 37.0 17.0 40.0 17 30.54240767121609 32.0 26.0 37.0 17.0 40.0 18 31.443913423096365 34.0 27.0 38.0 18.0 39.0 19 31.006880811237227 34.0 27.0 37.0 18.0 39.0 20 31.80321676393548 34.0 29.0 37.0 19.0 39.0 21 32.7738921311827 34.0 31.0 37.0 24.0 39.0 22 33.19631144402065 35.0 31.0 37.0 25.0 39.0 23 34.510923211249484 35.0 33.0 38.0 29.0 40.0 24 34.17304045463597 35.0 33.0 38.0 27.0 40.0 25 32.95870594182253 35.0 31.0 38.0 23.0 40.0 26 26.68616638328508 33.0 21.0 36.0 0.0 39.0 27 29.934659865508632 34.0 24.0 37.0 15.0 39.0 28 31.417912779743578 34.0 29.0 37.0 20.0 39.0 29 32.750820274803544 35.0 30.0 37.0 23.0 39.0 30 32.48923915873964 35.0 31.0 38.0 23.0 39.0 31 31.342199347456457 34.0 29.0 37.0 20.0 39.0 32 31.69478118346277 34.0 30.0 37.0 20.0 39.0 33 31.45512001593064 34.0 30.0 37.0 18.0 39.0 34 31.56114149165939 34.0 30.0 38.0 18.0 39.0 35 30.836956022241626 34.0 29.0 37.0 15.0 39.0 36 30.547667846146776 34.0 28.0 37.0 12.0 39.0 37 30.586648897875403 34.0 28.0 37.0 12.0 39.0 38 30.334610848153424 34.0 28.0 37.0 11.0 39.0 39 30.241085734417844 34.0 28.0 37.0 10.0 39.0 40 30.20830231453824 34.0 28.0 37.0 11.0 39.0 41 29.671586783695602 33.0 27.0 36.0 10.0 38.0 42 29.843505966331204 33.0 27.0 36.0 10.0 38.0 43 29.379477046091633 33.0 26.0 36.0 10.0 38.0 44 29.146613973009817 33.0 26.0 36.0 10.0 38.0 45 28.628647580533983 32.0 24.0 35.0 10.0 38.0 46 28.15356524669516 32.0 23.0 35.0 9.0 38.0 47 28.25699799335202 32.0 24.0 35.0 10.0 38.0 48 28.366046290764825 32.0 24.0 35.0 10.0 38.0 49 28.207597690057135 32.0 24.0 35.0 9.0 38.0 50 30.076568172418547 34.0 27.0 37.0 10.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 10.0 12 16.0 13 40.0 14 105.0 15 197.0 16 420.0 17 767.0 18 1322.0 19 2067.0 20 3065.0 21 4356.0 22 5804.0 23 7755.0 24 10094.0 25 12852.0 26 15544.0 27 17227.0 28 19341.0 29 22944.0 30 27866.0 31 32485.0 32 36281.0 33 36438.0 34 31766.0 35 23758.0 36 11544.0 37 2285.0 38 64.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.42131948593049 23.993995373987104 27.7438230473477 22.84086209273471 2 35.74222998330347 17.593554217790235 32.48655852212674 14.17765727677956 3 29.04860377127277 14.79558231086194 41.17764195885606 14.978171959009238 4 26.32722148185592 25.317157606114915 34.5578481381064 13.797772773922768 5 19.449780187797742 30.432424980469648 36.66896435519201 13.4488304765406 6 18.54173368258199 35.02780203115666 35.51184841382902 10.918615872432333 7 80.03339307323499 3.355237963941608 14.776281727249055 1.8350872355743457 8 81.84672885743609 2.074353200680116 14.187767106291071 1.8911508355927271 9 69.56543051024003 2.9140817670756554 14.493819217866827 13.026668504817488 10 45.5591807974511 21.975399414855325 21.24320267144586 11.222217116247721 11 39.23502290029563 20.257953831778565 27.85932019055497 12.647703077370831 12 35.0575188027511 20.372531899575694 31.344454145795996 13.225495151877212 13 20.226398909363848 34.05664568111147 31.523673850772788 14.193281558751897 14 15.17944947382933 33.842501110549456 35.070998575433116 15.907050840188102 15 13.489269794586644 19.793208032719082 48.15832605731967 18.559196115374597 16 14.969593921847954 15.679426496944075 46.189053811865264 23.16192576934271 17 16.453900709219855 17.777062941347673 35.357137386455896 30.41189896297658 18 20.84340486803609 20.246312209916823 39.593155951779174 19.31712697026791 19 26.037100010722547 21.843665272735628 32.5992984391036 19.51993627743823 20 27.622505093209565 21.007613007980638 32.303662515509394 19.0662193833004 21 21.291913668183142 25.417030467349843 34.03183064503776 19.259225219429254 22 21.423647810302835 21.65311030436714 32.00955838426543 24.913683501064597 23 18.337086224591395 26.080296554999006 32.511067199730405 23.071550020679197 24 17.43271602101619 20.56615045264464 44.34998391618032 17.651149610158846 25 17.25992984391036 21.37217958733514 40.6782776526814 20.689612916073095 26 13.73251841980301 40.29441048971402 28.088169967679182 17.884901122803793 27 16.270085627192376 29.873627131106105 34.96377311091708 18.89251413078443 28 15.462831058621692 24.838012958963283 42.14205842256023 17.557097559854785 29 16.24649602499885 21.68221435902149 41.29926627146424 20.772023344515418 30 18.736884028001164 25.981036410704167 36.94744420446364 18.33463535683103 31 26.951273685339217 23.403029885268754 31.5337836802843 18.11191274910773 32 27.27999632369836 22.844844752845304 32.274864819325096 17.600294104131244 33 26.113076911293902 23.803440405618616 30.733575356524668 19.349907326562814 34 19.256161634728798 24.40329028996829 32.530674141813336 23.809873933489577 35 20.104774596755664 23.881255457010248 34.0180445138857 21.99592543234839 36 26.378689704823614 23.529249574927622 30.079806381446932 20.01225433880183 37 19.802398786820458 29.71493344362238 30.40607815204571 20.076589617511452 38 19.96507513441478 30.192546298423785 28.355620912029167 21.486757655132273 39 19.642173306986503 29.249574927622813 28.714673038922843 22.39357872646784 40 22.95911646217239 24.582816353415133 28.6521759110335 23.805891273378982 41 18.0521728474488 22.767336059923718 30.315396044912152 28.865095047715332 42 20.8060291346905 23.39659635739779 27.116400900693904 28.68097360721781 43 20.739855705160608 24.120215063645972 29.082915919917895 26.057013311275522 44 19.23532925876568 27.02388064274007 30.000153179235024 23.740636919259224 45 17.581912595928493 32.588575892651996 27.30542407671216 22.52408743470735 46 20.488335401253003 28.665655683715514 28.879493895807485 21.966515019223994 47 19.89338725242406 25.81223289370893 29.475667478516616 24.818712375350398 48 20.204341099520548 23.228405557342647 33.18321768301089 23.384035660125914 49 20.247537643797006 23.206347747499347 33.43596342079868 23.110151187904968 50 18.99177427507927 29.019499716618412 30.955685247307873 21.03304076099444 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 95.0 1 210.5 2 326.0 3 2876.5 4 5427.0 5 4417.0 6 3407.0 7 3351.5 8 3296.0 9 3582.5 10 3869.0 11 4013.5 12 4158.0 13 4128.5 14 4099.0 15 3873.5 16 3648.0 17 3480.5 18 3313.0 19 3133.0 20 2953.0 21 2773.0 22 2593.0 23 2556.0 24 2519.0 25 2448.5 26 2378.0 27 2736.0 28 3094.0 29 3289.0 30 3484.0 31 4176.5 32 4869.0 33 5870.0 34 6871.0 35 7258.5 36 7646.0 37 8547.5 38 9449.0 39 11628.0 40 13807.0 41 18007.0 42 22207.0 43 25164.0 44 28121.0 45 28470.0 46 28819.0 47 27248.0 48 25677.0 49 24483.5 50 23290.0 51 22179.0 52 21068.0 53 19252.5 54 17437.0 55 15994.5 56 14552.0 57 13653.5 58 12755.0 59 11822.0 60 10889.0 61 9928.5 62 8968.0 63 7931.0 64 6894.0 65 5823.5 66 4753.0 67 4083.0 68 3413.0 69 2848.0 70 2283.0 71 1975.0 72 1667.0 73 1327.0 74 987.0 75 816.5 76 646.0 77 479.5 78 313.0 79 247.5 80 182.0 81 138.5 82 95.0 83 73.0 84 51.0 85 37.0 86 23.0 87 17.5 88 12.0 89 10.0 90 8.0 91 5.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 326415.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.75325493722042 #Duplication Level Percentage of deduplicated Percentage of total 1 82.03242158342925 43.27477248908186 2 6.976812183048112 7.360991034828847 3 2.8239497796722888 4.4691762797087895 4 1.6921342737517653 3.570623629249408 5 1.0781524248498047 2.8438024864642064 6 0.8636963299743885 2.733767561008834 7 0.6496770626555894 2.3990805799194383 8 0.544384736663118 2.2974453437696853 9 0.4218337384966604 2.0027792473231587 >10 2.885179592000183 26.783863178019168 >50 0.028022025404847495 0.8925363415458824 >100 0.0024908467026531103 0.14651130229277276 >500 6.227116756632776E-4 0.18330337820485917 >1k 6.227116756632776E-4 1.0413471485831605 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3170 0.9711563500451879 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTT 558 0.17094802628555675 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03492486558522127 0.0 2 0.0 0.0 0.0 0.12652604812891566 0.0 3 0.0 0.0 0.0 0.1672717246450071 0.0 4 0.0 0.0 0.0 0.23528330499517486 0.0 5 0.0 0.0 0.0 0.4062313312807316 0.0 6 0.0 0.0 0.0 0.5615550755939525 0.0 7 0.0 0.0 0.0 0.6801158035016773 0.0 8 0.0 0.0 0.0 1.0305898932340731 0.0 9 0.0 0.0 0.0 1.2508616331970037 0.0 10 0.0 0.0 0.0 1.5657981404040868 0.0 11 0.0 0.0 0.0 1.7545149579523 0.0 12 0.0 0.0 0.0 1.9380236815097345 0.0 13 0.0 0.0 0.0 2.0106306389105892 0.0 14 0.0 0.0 0.0 2.035752033454345 0.0 15 0.0 0.0 0.0 2.0645497296386504 0.0 16 0.0 0.0 0.0 2.123370555887444 0.0 17 0.0 0.0 0.0 2.2192607570117793 0.0 18 0.0 0.0 0.0 2.346399522080787 0.0 19 0.0 0.0 0.0 2.3895960663572446 0.0 20 0.0 0.0 0.0 2.4478041756659468 0.0 21 0.0 0.0 0.0 2.516428472956206 0.0 22 0.0 0.0 0.0 2.585359128716511 0.0 23 0.0 0.0 0.0 2.6601105954076867 0.0 24 0.0 0.0 0.0 2.714336044605793 0.0 25 0.0 0.0 0.0 2.758145305822343 0.0 26 0.0 0.0 0.0 2.800422774688663 0.0 27 0.0 0.0 0.0 2.8537291484766327 0.0 28 0.0 0.0 0.0 2.9153072009558385 0.0 29 0.0 0.0 0.0 2.9778043288451816 0.0 30 0.0 0.0 0.0 3.0672610020985553 0.0 31 0.0 0.0 0.0 3.1441569780800513 0.0 32 0.0 0.0 0.0 3.210943124550036 0.0 33 0.0 0.0 0.0 3.2841627988909825 0.0 34 0.0 0.0 0.0 3.3521743792411502 0.0 35 0.0 0.0 0.0 3.4489836557756233 0.0 36 0.0 0.0 0.0 3.51852702847602 0.0 37 0.0 0.0 0.0 3.588989476586554 0.0 38 0.0 0.0 0.0 3.6664981695081416 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTTA 20 7.8481884E-4 44.000004 38 GATCATC 20 7.8481884E-4 44.000004 15 ATCGTAG 20 7.8481884E-4 44.000004 1 TAACCGC 20 7.8481884E-4 44.000004 27 TATAGCG 20 7.8481884E-4 44.000004 1 CGTCGCA 20 7.8481884E-4 44.000004 22 GCGCTCA 20 7.8481884E-4 44.000004 23 CCCGCCA 20 7.8481884E-4 44.000004 39 GCACGGC 25 4.4358138E-5 44.0 3 TTGTATC 50 2.7284841E-11 44.0 42 CACGACG 35 1.441822E-7 44.0 26 ACGGCAA 25 4.4358138E-5 44.0 5 CGAATTT 25 4.4358138E-5 44.0 24 AGCGATT 50 2.7284841E-11 44.0 22 TCGTAAG 30 2.522127E-6 44.0 1 CTCGAAT 25 4.4358138E-5 44.0 22 CATCGAC 35 1.441822E-7 44.0 17 CGGTCTA 45 4.783942E-10 44.0 31 TAGGCGA 35 1.441822E-7 44.0 5 TCGAATT 25 4.4358138E-5 44.0 23 >>END_MODULE